Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_024_P24
(888 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8HXX7|GDIA_MACFA Rab GDP dissociation inhibitor alpha (... 317 4e-86
sp|Q7YQM0|GDIA_PONPY Rab GDP dissociation inhibitor alpha (... 317 4e-86
sp|P60028|GDIA_PANTR Rab GDP dissociation inhibitor alpha (... 316 5e-86
sp|P50398|GDIA_RAT Rab GDP dissociation inhibitor alpha (Ra... 316 6e-86
sp|P21856|GDIA_BOVIN Rab GDP dissociation inhibitor alpha (... 315 1e-85
sp|O97555|GDIA_CANFA Rab GDP dissociation inhibitor alpha (... 314 2e-85
sp|P50396|GDIA_MOUSE Rab GDP dissociation inhibitor alpha (... 313 3e-85
sp|P50395|GDIB_HUMAN Rab GDP dissociation inhibitor beta (R... 311 1e-84
sp|Q5RCE1|GDIB_PONPY Rab GDP dissociation inhibitor beta (R... 310 3e-84
sp|P50397|GDIB_BOVIN Rab GDP dissociation inhibitor beta (R... 310 3e-84
>sp|Q8HXX7|GDIA_MACFA Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (Guanosine
diphosphate dissociation inhibitor 1) (GDI-1)
Length = 447
Score = 317 bits (811), Expect = 4e-86
Identities = 161/295 (54%), Positives = 210/295 (71%)
Frame = +3
Query: 3 IFKVPCDEKEALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYD 182
I+KVP E EALA++LMGMFEKRRFRK L++ +FD N P+T++ V +P+T ++R +Y
Sbjct: 116 IYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGV--DPQTTSMRDVYR 173
Query: 183 HFGVDRNTQDFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXX 362
F + ++ DF GHA+ +Y DDY+D+ E I R++LYS SLAR
Sbjct: 174 KFDLGQDVIDFTGHALALYRTDDYLDQPCLE-TINRIKLYSESLARYGKSPYLYPLYGLG 232
Query: 363 XXXXXFARLSAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKV 542
FARLSA++GGTYMLNK + I+ E+GKV+GV++EGEVARCK +ICDP Y+ D+V
Sbjct: 233 ELPQGFARLSAIYGGTYMLNKPVDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYIPDRV 291
Query: 543 KKIGSVIRAICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYVCCVSYTHSVASNPNFIA 722
+K G VIR ICIL+HP+ NTN A S QIIIPQNQVNR DIYVC +SY H+VA+ +IA
Sbjct: 292 RKAGQVIRIICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIA 351
Query: 723 LVATTVETKNpreELKPGLNLLGKIEQIFYTESDLYEPIDDGVESRVFVSTSYDA 887
+ +TTVET +P +E++P L LL I+Q F SDLYEPIDDG ES+VF S SYDA
Sbjct: 352 IASTTVETTDPEKEVEPALELLEPIDQKFVAISDLYEPIDDGCESQVFCSCSYDA 406
>sp|Q7YQM0|GDIA_PONPY Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (Guanosine
diphosphate dissociation inhibitor 1) (GDI-1)
Length = 447
Score = 317 bits (811), Expect = 4e-86
Identities = 161/295 (54%), Positives = 210/295 (71%)
Frame = +3
Query: 3 IFKVPCDEKEALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYD 182
I+KVP E EALA++LMGMFEKRRFRK L++ +FD N P+T++ V +P+T ++R +Y
Sbjct: 116 IYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGV--DPQTTSMRDVYR 173
Query: 183 HFGVDRNTQDFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXX 362
F + ++ DF GHA+ +Y DDY+D+ E I R++LYS SLAR
Sbjct: 174 KFDLGQDVIDFTGHALALYRTDDYLDQPCLE-TINRIKLYSESLARYGKSPYLYPLYGLG 232
Query: 363 XXXXXFARLSAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKV 542
FARLSA++GGTYMLNK + I+ E+GKV+GV++EGEVARCK +ICDP Y+ D+V
Sbjct: 233 ELPQGFARLSAIYGGTYMLNKPVDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYIPDRV 291
Query: 543 KKIGSVIRAICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYVCCVSYTHSVASNPNFIA 722
+K G VIR ICIL+HP+ NTN A S QIIIPQNQVNR DIYVC +SY H+VA+ +IA
Sbjct: 292 RKAGQVIRIICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIA 351
Query: 723 LVATTVETKNpreELKPGLNLLGKIEQIFYTESDLYEPIDDGVESRVFVSTSYDA 887
+ +TTVET +P +E++P L LL I+Q F SDLYEPIDDG ES+VF S SYDA
Sbjct: 352 IASTTVETTDPEKEVEPALELLEPIDQKFVAISDLYEPIDDGCESQVFCSCSYDA 406
>sp|P60028|GDIA_PANTR Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (Guanosine
diphosphate dissociation inhibitor 1) (GDI-1)
sp|P31150|GDIA_HUMAN Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (Guanosine
diphosphate dissociation inhibitor 1) (GDI-1) (XAP-4)
(Oligophrenin-2)
Length = 447
Score = 316 bits (810), Expect = 5e-86
Identities = 160/295 (54%), Positives = 210/295 (71%)
Frame = +3
Query: 3 IFKVPCDEKEALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYD 182
I+KVP E EALA++LMGMFEKRRFRK L++ +FD N P+T++ V +P+T ++R +Y
Sbjct: 116 IYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGV--DPQTTSMRDVYR 173
Query: 183 HFGVDRNTQDFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXX 362
F + ++ DF GHA+ +Y DDY+D+ E + R++LYS SLAR
Sbjct: 174 KFDLGQDVIDFTGHALALYRTDDYLDQPCLE-TVNRIKLYSESLARYGKSPYLYPLYGLG 232
Query: 363 XXXXXFARLSAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKV 542
FARLSA++GGTYMLNK + I+ E+GKV+GV++EGEVARCK +ICDP Y+ D+V
Sbjct: 233 ELPQGFARLSAIYGGTYMLNKPVDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYIPDRV 291
Query: 543 KKIGSVIRAICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYVCCVSYTHSVASNPNFIA 722
+K G VIR ICIL+HP+ NTN A S QIIIPQNQVNR DIYVC +SY H+VA+ +IA
Sbjct: 292 RKAGQVIRIICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIA 351
Query: 723 LVATTVETKNpreELKPGLNLLGKIEQIFYTESDLYEPIDDGVESRVFVSTSYDA 887
+ +TTVET +P +E++P L LL I+Q F SDLYEPIDDG ES+VF S SYDA
Sbjct: 352 IASTTVETTDPEKEVEPALELLEPIDQKFVAISDLYEPIDDGCESQVFCSCSYDA 406
>sp|P50398|GDIA_RAT Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (Guanosine
diphosphate dissociation inhibitor 1) (GDI-1)
Length = 447
Score = 316 bits (809), Expect = 6e-86
Identities = 161/295 (54%), Positives = 209/295 (70%)
Frame = +3
Query: 3 IFKVPCDEKEALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYD 182
I+KVP E EALA++LMGMFEKRRFRK L++ +FD N P+T++ V +P+T ++R +Y
Sbjct: 116 IYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGV--DPQTTSMRDVYR 173
Query: 183 HFGVDRNTQDFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXX 362
F + ++ DF GHA+ +Y DDY+D+ E I R++LYS SLAR
Sbjct: 174 KFDLGQDVIDFTGHALALYRTDDYLDQPCLE-TINRIKLYSESLARYGKSPYLYPLYGLG 232
Query: 363 XXXXXFARLSAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKV 542
FARLSA++GGTYMLNK + I+ E+GKV+GV++EGEVARCK +ICDP Y+ D+V
Sbjct: 233 ELPQGFARLSAIYGGTYMLNKPVDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYIPDRV 291
Query: 543 KKIGSVIRAICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYVCCVSYTHSVASNPNFIA 722
+K G VIR ICIL+HP+ NTN A S QIIIPQNQVNR DIYVC +SY H+VA+ +IA
Sbjct: 292 RKAGQVIRIICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIA 351
Query: 723 LVATTVETKNpreELKPGLNLLGKIEQIFYTESDLYEPIDDGVESRVFVSTSYDA 887
+ +TTVET P +E++P L LL I+Q F SDLYEPIDDG ES+VF S SYDA
Sbjct: 352 IASTTVETAEPEKEVEPALELLEPIDQKFVAISDLYEPIDDGSESQVFCSCSYDA 406
>sp|P21856|GDIA_BOVIN Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (Guanosine
diphosphate dissociation inhibitor 1) (GDI-1) (SMG p25A
GDI)
Length = 447
Score = 315 bits (806), Expect = 1e-85
Identities = 161/295 (54%), Positives = 209/295 (70%)
Frame = +3
Query: 3 IFKVPCDEKEALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYD 182
I+KVP E EALA++LMGMFEKRRFRK L++ +FD N P+T++ V +P+ ++R +Y
Sbjct: 116 IYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGV--DPQNTSMRDVYR 173
Query: 183 HFGVDRNTQDFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXX 362
F + ++ DF GHA+ +Y DDY+D+ E I R++LYS SLAR
Sbjct: 174 KFDLGQDVIDFTGHALALYRTDDYLDQPCLE-TINRIKLYSESLARYGKSPYLYPLYGLG 232
Query: 363 XXXXXFARLSAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKV 542
FARLSA++GGTYMLNK + I+ E+GKV+GV++EGEVARCK +ICDP YV D+V
Sbjct: 233 ELPQGFARLSAIYGGTYMLNKPVDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYVPDRV 291
Query: 543 KKIGSVIRAICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYVCCVSYTHSVASNPNFIA 722
+K G VIR ICIL+HP+ NTN A S QIIIPQNQVNR DIYVC +SY H+VA+ +IA
Sbjct: 292 RKAGQVIRIICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIA 351
Query: 723 LVATTVETKNpreELKPGLNLLGKIEQIFYTESDLYEPIDDGVESRVFVSTSYDA 887
+ +TTVET +P +E++P L LL I+Q F SDLYEPIDDG ES+VF S SYDA
Sbjct: 352 IASTTVETTDPEKEVEPALELLEPIDQKFVAISDLYEPIDDGSESQVFCSCSYDA 406
>sp|O97555|GDIA_CANFA Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (Guanosine
diphosphate dissociation inhibitor 1) (GDI-1)
Length = 447
Score = 314 bits (805), Expect = 2e-85
Identities = 160/295 (54%), Positives = 209/295 (70%)
Frame = +3
Query: 3 IFKVPCDEKEALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYD 182
I+KVP E EALA++LMGMFEKRRFRK L++ +FD N P+T++ V +P++ ++R +Y
Sbjct: 116 IYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGV--DPQSTSMRDVYR 173
Query: 183 HFGVDRNTQDFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXX 362
F + ++ DF GHA+ +Y DDY+D+ E I R++LYS SLAR
Sbjct: 174 KFDLGQDVIDFTGHALALYRTDDYLDQPCLE-TINRIKLYSESLARYGKSPYLYPLYGLG 232
Query: 363 XXXXXFARLSAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKV 542
FARLSA++GGTYMLNK + I+ E+GKV+GV++EGEVARCK +ICDP Y+ D+V
Sbjct: 233 ELPQGFARLSAIYGGTYMLNKPVDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYIPDRV 291
Query: 543 KKIGSVIRAICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYVCCVSYTHSVASNPNFIA 722
+K G VIR ICIL+HP+ NTN A S QIIIPQNQVNR DIYVC +SY H+VA+ +IA
Sbjct: 292 RKAGQVIRIICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIA 351
Query: 723 LVATTVETKNpreELKPGLNLLGKIEQIFYTESDLYEPIDDGVESRVFVSTSYDA 887
+ +TTVET P +E++P L LL I+Q F SDLYEPIDDG ES+VF S SYDA
Sbjct: 352 IASTTVETAEPEKEVEPALELLEPIDQKFVAISDLYEPIDDGSESQVFCSCSYDA 406
>sp|P50396|GDIA_MOUSE Rab GDP dissociation inhibitor alpha (Rab GDI alpha) (Guanosine
diphosphate dissociation inhibitor 1) (GDI-1)
Length = 447
Score = 313 bits (803), Expect = 3e-85
Identities = 160/295 (54%), Positives = 208/295 (70%)
Frame = +3
Query: 3 IFKVPCDEKEALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYD 182
I+KVP E EALA++LMGMFEKRRFRK L++ +FD N P+T++ V +P+ ++R +Y
Sbjct: 116 IYKVPSTETEALASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGV--DPQNTSMRDVYR 173
Query: 183 HFGVDRNTQDFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXX 362
F + ++ DF GHA+ +Y DDY+D+ E I R++LYS SLAR
Sbjct: 174 KFDLGQDVIDFTGHALALYRTDDYLDQPCLE-TINRIKLYSESLARYGKSPYLYPLYGLG 232
Query: 363 XXXXXFARLSAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKV 542
FARLSA++GGTYMLNK + I+ E+GKV+GV++EGEVARCK +ICDP Y+ D+V
Sbjct: 233 ELPQGFARLSAIYGGTYMLNKPVDDIIM-ENGKVVGVKSEGEVARCKQLICDPSYIPDRV 291
Query: 543 KKIGSVIRAICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYVCCVSYTHSVASNPNFIA 722
+K G VIR ICIL+HP+ NTN A S QIIIPQNQVNR DIYVC +SY H+VA+ +IA
Sbjct: 292 QKAGQVIRIICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISYAHNVAAQGKYIA 351
Query: 723 LVATTVETKNpreELKPGLNLLGKIEQIFYTESDLYEPIDDGVESRVFVSTSYDA 887
+ +TTVET P +E++P L LL I+Q F SDLYEPIDDG ES+VF S SYDA
Sbjct: 352 IASTTVETAEPEKEVEPALELLEPIDQKFVAISDLYEPIDDGSESQVFCSCSYDA 406
>sp|P50395|GDIB_HUMAN Rab GDP dissociation inhibitor beta (Rab GDI beta) (Guanosine
diphosphate dissociation inhibitor 2) (GDI-2)
Length = 445
Score = 311 bits (798), Expect = 1e-84
Identities = 157/295 (53%), Positives = 209/295 (70%)
Frame = +3
Query: 3 IFKVPCDEKEALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYD 182
I+KVP E EALA+SLMG+FEKRRFRK L++ +FD P T++ + +P+ T+R +Y
Sbjct: 116 IYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGI--DPKKTTMRDVYK 173
Query: 183 HFGVDRNTQDFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXX 362
F + ++ DF GHA+ +Y DDY+D+ E I R++LYS SLAR
Sbjct: 174 KFDLGQDVIDFTGHALALYRTDDYLDQP-CYETINRIKLYSESLARYGKSPYLYPLYGLG 232
Query: 363 XXXXXFARLSAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKV 542
FARLSA++GGTYMLNK E+I+ ++GKVIGV++EGE+ARCK +ICDP YVKD+V
Sbjct: 233 ELPQGFARLSAIYGGTYMLNKPIEEIIV-QNGKVIGVKSEGEIARCKQLICDPSYVKDRV 291
Query: 543 KKIGSVIRAICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYVCCVSYTHSVASNPNFIA 722
+K+G VIR ICIL+HP+ NTN A S QIIIPQNQVNR DIYVC +S+ H+VA+ +IA
Sbjct: 292 EKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIA 351
Query: 723 LVATTVETKNpreELKPGLNLLGKIEQIFYTESDLYEPIDDGVESRVFVSTSYDA 887
+V+TTVETK P +E++P L LL IEQ F + SDL P D G ES++F+S +YDA
Sbjct: 352 IVSTTVETKEPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESQIFISRTYDA 406
>sp|Q5RCE1|GDIB_PONPY Rab GDP dissociation inhibitor beta (Rab GDI beta) (Guanosine
diphosphate dissociation inhibitor 2) (GDI-2)
Length = 445
Score = 310 bits (795), Expect = 3e-84
Identities = 157/295 (53%), Positives = 208/295 (70%)
Frame = +3
Query: 3 IFKVPCDEKEALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYD 182
I+KVP E EALA+SLMG+FEKRRFRK L++ +FD P T++ + +P+ T+R +Y
Sbjct: 116 IYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDEKDPRTFEGI--DPKKTTMRDVYK 173
Query: 183 HFGVDRNTQDFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXX 362
F + ++ DF GHA+ +Y DDY+D+ E I R++LYS SLAR
Sbjct: 174 KFDLGQDVIDFTGHALALYRTDDYLDQP-CYETINRIKLYSESLARYGKSPYLYPLYGLG 232
Query: 363 XXXXXFARLSAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKV 542
FARLSA++GGTYMLNK E+I+ ++GKVIGV++EGE+ARCK +ICDP YVKD+V
Sbjct: 233 ELPQGFARLSAIYGGTYMLNKPIEEIIV-QNGKVIGVKSEGEIARCKQLICDPSYVKDRV 291
Query: 543 KKIGSVIRAICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYVCCVSYTHSVASNPNFIA 722
+K+G VIR ICIL+HP+ NTN A S QIIIPQNQVNR DIYVC +S+ H+VA+ +IA
Sbjct: 292 EKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISFAHNVAAQGKYIA 351
Query: 723 LVATTVETKNpreELKPGLNLLGKIEQIFYTESDLYEPIDDGVESRVFVSTSYDA 887
+V+TTVETK P +E++P L LL IEQ F + SDL P D G ES +F+S +YDA
Sbjct: 352 IVSTTVETKEPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESLIFISRTYDA 406
>sp|P50397|GDIB_BOVIN Rab GDP dissociation inhibitor beta (Rab GDI beta) (Guanosine
diphosphate dissociation inhibitor 2) (GDI-2)
Length = 445
Score = 310 bits (794), Expect = 3e-84
Identities = 156/295 (52%), Positives = 209/295 (70%)
Frame = +3
Query: 3 IFKVPCDEKEALATSLMGMFEKRRFRKLLMWAMSFDINKPETYKNVVTNPRTETIRKIYD 182
I+KVP E EALA+SLMG+FEKRRFRK L++ +FD N P T++ + +P+ ++R++Y
Sbjct: 116 IYKVPSTEAEALASSLMGLFEKRRFRKFLVYVANFDENDPRTFEGI--DPKKTSMREVYK 173
Query: 183 HFGVDRNTQDFIGHAICVYLNDDYIDKSSAEEAIKRMQLYSNSLARXXXXXXXXXXXXXX 362
F + ++ DF GHA+ +Y DDY+D+ E I R++LYS SLAR
Sbjct: 174 KFDLGQDVIDFTGHALALYRTDDYLDQPCCE-TINRIKLYSESLARYGKSPYLYPLYGLG 232
Query: 363 XXXXXFARLSAVFGGTYMLNKQFEKIVYDESGKVIGVQAEGEVARCKAVICDPGYVKDKV 542
FARLSA++GGTYMLNK E+I+ ++GKVIGV++EGE+ARCK +ICDP YVKD+V
Sbjct: 233 ELPQGFARLSAIYGGTYMLNKPIEEIIM-QNGKVIGVKSEGEIARCKQLICDPSYVKDRV 291
Query: 543 KKIGSVIRAICILTHPVPNTNGALSTQIIIPQNQVNRNHDIYVCCVSYTHSVASNPNFIA 722
+K+G VIR ICIL+HP+ NTN A S QIIIPQNQVNR DIYVC +S H+VA+ +IA
Sbjct: 292 EKVGQVIRVICILSHPIKNTNDANSCQIIIPQNQVNRKSDIYVCMISSAHNVAAQGKYIA 351
Query: 723 LVATTVETKNpreELKPGLNLLGKIEQIFYTESDLYEPIDDGVESRVFVSTSYDA 887
+ +TTVETK P +E++P L LL IEQ F + SDL P D G ES++F+S +YDA
Sbjct: 352 IASTTVETKEPEKEIRPALELLEPIEQKFVSISDLLVPKDLGTESQIFISRTYDA 406
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,131,194
Number of Sequences: 369166
Number of extensions: 2210001
Number of successful extensions: 6602
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6535
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8886314050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)