Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_024_P20
(912 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q08876|SUHW_DROVI Suppressor of hairy wing protein 60 8e-09
sp|Q08875|SUHW_DROAN Suppressor of hairy wing protein 57 5e-08
sp|Q9UTL5|TF3A_SCHPO Transcription factor IIIA (Factor A) (... 57 5e-08
sp|P18714|ZG20_XENLA Gastrula zinc finger protein XFG20-1 (... 55 2e-07
sp|Q9NQX1|PRDM5_HUMAN PR-domain zinc finger protein 5 55 2e-07
sp|Q9UJL9|ZN643_HUMAN Zinc finger protein 643 52 2e-06
sp|P08970|SUHW_DROME Suppressor of hairy wing protein 52 2e-06
sp|Q9Y473|ZN175_HUMAN Zinc finger protein 175 (Zinc finger ... 51 4e-06
sp|P16373|ZFP59_MOUSE Zinc finger protein 59 (Zfp-59) (Zinc... 51 5e-06
sp|P18722|ZG46_XENLA Gastrula zinc finger protein XLCGF46.1 50 7e-06
>sp|Q08876|SUHW_DROVI Suppressor of hairy wing protein
Length = 899
Score = 60.1 bits (144), Expect = 8e-09
Identities = 57/245 (23%), Positives = 91/245 (37%), Gaps = 20/245 (8%)
Frame = +1
Query: 40 TSPTKIETFSCDVCQLKFKSLRARDSHATAEHKGLKLFCCKVCNLSFTTHILLRKHAQKY 219
T K + C VC+ F SL + H H G K F C +C+ F+ + L+KH ++Y
Sbjct: 404 TQVVKKPEYMCHVCKNCFYSLSTLNIHIRT-HTGEKPFDCDLCDKKFSALVALKKH-RRY 461
Query: 220 HIDNVALAVFGIXXXXXXXXXXXCTFCPLQFTSRSGLNHHITSGHRSEADTPQVLSDFLT 399
H CT C F + LN H+ R + P ++
Sbjct: 462 HTGE---------------KPYTCTVCSQSFAVKEVLNRHM---KRHTGERPHKCNECGK 503
Query: 400 KLIAA-------DPNFSPQSCLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFACPKC 558
I A + P +C +C + E +L+ H +H ++ + FAC +C
Sbjct: 504 SFIQATQLRTHSKTHLRPYACSLCIQKFKTEKQLERHVKDHTRQ------KRASFACTEC 557
Query: 559 CRLFFGKDGKSYLKDHYNI--------VHLQKSL-----PTCEECDMKFNSTVCYLMHRK 699
R F + LK+H + ++S C CD F++T H +
Sbjct: 558 TRSF---RTSALLKEHLDAGDHSPVKSTRAKRSAKMIERTDCAICDKNFDTTETLRNHIR 614
Query: 700 YVKNC 714
V C
Sbjct: 615 SVHEC 619
Score = 45.4 bits (106), Expect = 2e-04
Identities = 47/215 (21%), Positives = 72/215 (33%), Gaps = 3/215 (1%)
Frame = +1
Query: 67 SCDVCQLKFKSLRARDSHATAEHK-GLKLFCCKVCNLSFTTHILLRKHAQKYHIDNVALA 243
+C C FK+ + + H H + C +CN + LL+ H Q++ + A
Sbjct: 289 NCPDCPKSFKTQTSYERHIFITHSWSCNDYPCSICNAKLRSGALLKLHEQQHQLRGKPFA 348
Query: 244 VFGIXXXXXXXXXXXCTFCPLQFTSRSGLNHH--ITSGHRSEADTPQVLSDFLTKLIAAD 417
C C F L H +S +E DT
Sbjct: 349 ---------------CKICGKDFMCSYHLKCHQKYSSCSANENDT--------------- 378
Query: 418 PNFSPQSCLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFACPKCCRLFFGKDGKSYL 597
SC +C + L H +H T V+ ++ C C F+ S L
Sbjct: 379 -----MSCKVCDRVFYRLDNLCAHLKQH---LGTQVVKKPEYMCHVCKNCFY---SLSTL 427
Query: 598 KDHYNIVHLQKSLPTCEECDMKFNSTVCYLMHRKY 702
H H + C+ CD KF++ V HR+Y
Sbjct: 428 NIHIR-THTGEKPFDCDLCDKKFSALVALKKHRRY 461
Score = 39.3 bits (90), Expect = 0.015
Identities = 54/257 (21%), Positives = 85/257 (33%), Gaps = 47/257 (18%)
Frame = +1
Query: 64 FSCDVCQLKFKSLRARDSHATAEHKGLKLFCCKVCNLSFTTHILLRKHAQK--------- 216
+ C +C K +S H K F CK+C F L+ H +
Sbjct: 318 YPCSICNAKLRSGALLKLHEQQHQLRGKPFACKICGKDFMCSYHLKCHQKYSSCSANEND 377
Query: 217 -----------YHIDNV-ALAVFGIXXXXXXXXXXXCTFCPLQFTSRSGLNHHITSGHRS 360
Y +DN+ A + C C F S S LN HI + H
Sbjct: 378 TMSCKVCDRVFYRLDNLCAHLKQHLGTQVVKKPEYMCHVCKNCFYSLSTLNIHIRT-HTG 436
Query: 361 EADTPQVLSDFLTKLIAA-------DPNFSPQSCLIC------QEIMNNEFELDIHTIEH 501
E L D + A P +C +C +E++N + H
Sbjct: 437 EKPFDCDLCDKKFSALVALKKHRRYHTGEKPYTCTVCSQSFAVKEVLNRHMKRHTGERPH 496
Query: 502 Q-KECQTAEVEPTQ-----------FACPKCCRLF-FGKDGKSYLKDHYNIVHLQKSLPT 642
+ EC + ++ TQ +AC C + F K + ++KDH +++
Sbjct: 497 KCNECGKSFIQATQLRTHSKTHLRPYACSLCIQKFKTEKQLERHVKDH---TRQKRASFA 553
Query: 643 CEECDMKFNSTVCYLMH 693
C EC F ++ H
Sbjct: 554 CTECTRSFRTSALLKEH 570
>sp|Q08875|SUHW_DROAN Suppressor of hairy wing protein
Length = 886
Score = 57.4 bits (137), Expect = 5e-08
Identities = 59/249 (23%), Positives = 91/249 (36%), Gaps = 24/249 (9%)
Frame = +1
Query: 40 TSPTKIETFSCDVCQLKFKSLRARDSHATAEHKGLKLFCCKVCNLSFTTHILLRKHAQKY 219
T K + C VC+ F SL + H H G K F C +C+ + + L+KH ++Y
Sbjct: 406 TQVVKKPEYMCHVCKNCFYSLSTLNIHIRT-HTGEKPFDCDLCDKKLSALVALKKH-RRY 463
Query: 220 HIDNVALAVFGIXXXXXXXXXXXCTFCPLQFTSRSGLNHHITSGHRSEADTPQVLSDFLT 399
H + CT C F + LN H+ R + P +
Sbjct: 464 HTGEKPYS---------------CTVCNQAFAVKEVLNRHMK---RHTGERPHKCEECGK 505
Query: 400 KLIAADP-------NFSPQSCLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFACPKC 558
I A + P +C +C+E E +L+ H EH ++ + F+C +C
Sbjct: 506 SFIQATQLRTHSKTHIRPFACDMCEEKFKTEKQLERHVKEHSRQ------KRPYFSCTEC 559
Query: 559 CRLFFGKDGKSYLKDHYNI-VHLQKS----------------LPTCEECDMKFNSTVCYL 687
R F + LK H + H +KS C CD F+S+
Sbjct: 560 KRHF---RNTAQLKQHMDAGDHSEKSGEKPQRAKRSSTKVLERTDCAICDKNFDSSETLR 616
Query: 688 MHRKYVKNC 714
H + V C
Sbjct: 617 KHIRSVHEC 625
Score = 47.8 bits (112), Expect = 4e-05
Identities = 46/214 (21%), Positives = 71/214 (33%), Gaps = 2/214 (0%)
Frame = +1
Query: 67 SCDVCQLKFKSLRARDSHATAEHKGLKLFCCKVCNLSFTTHILLRKHAQKYHIDNVALAV 246
+C C FK+ + + H H + C +CN + + LL+ H +++ A
Sbjct: 292 NCPDCPKSFKTQTSYERHIFITHSEFSDYPCSICNANLRSEALLKLHEEQHKSRGKPYA- 350
Query: 247 FGIXXXXXXXXXXXCTFCPLQFTSRSGLNHH--ITSGHRSEADTPQVLSDFLTKLIAADP 420
C C FT L H +S +E DT
Sbjct: 351 --------------CKICGKDFTRSYHLKRHQKYSSCSANENDT---------------- 380
Query: 421 NFSPQSCLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFACPKCCRLFFGKDGKSYLK 600
SC +C + L H H T V+ ++ C C F+ S L
Sbjct: 381 ----MSCKVCDRVFYRLDNLRSHLKHH---LGTQVVKKPEYMCHVCKNCFY---SLSTLN 430
Query: 601 DHYNIVHLQKSLPTCEECDMKFNSTVCYLMHRKY 702
H H + C+ CD K ++ V HR+Y
Sbjct: 431 IHIR-THTGEKPFDCDLCDKKLSALVALKKHRRY 463
Score = 43.1 bits (100), Expect = 0.001
Identities = 52/261 (19%), Positives = 88/261 (33%), Gaps = 46/261 (17%)
Frame = +1
Query: 49 TKIETFSCDVCQLKFKSLRARDSHATAEHKGLKLFCCKVCNLSFTTHILLRKHAQK---- 216
++ + C +C +S H K + CK+C FT L++H +
Sbjct: 315 SEFSDYPCSICNANLRSEALLKLHEEQHKSRGKPYACKICGKDFTRSYHLKRHQKYSSCS 374
Query: 217 ----------------YHIDNVALAV-FGIXXXXXXXXXXXCTFCPLQFTSRSGLNHHIT 345
Y +DN+ + + C C F S S LN HI
Sbjct: 375 ANENDTMSCKVCDRVFYRLDNLRSHLKHHLGTQVVKKPEYMCHVCKNCFYSLSTLNIHIR 434
Query: 346 SGHRSEADTPQVLSDFLTKLIAADPN------FSPQSCLICQEIMNNEFELDIHTIEHQ- 504
+ + + L+ L+A + P SC +C + + L+ H H
Sbjct: 435 THTGEKPFDCDLCDKKLSALVALKKHRRYHTGEKPYSCTVCNQAFAVKEVLNRHMKRHTG 494
Query: 505 ------KECQTAEVEPTQ-----------FACPKCCRLF-FGKDGKSYLKDHYNIVHLQK 630
+EC + ++ TQ FAC C F K + ++K+H ++
Sbjct: 495 ERPHKCEECGKSFIQATQLRTHSKTHIRPFACDMCEEKFKTEKQLERHVKEH---SRQKR 551
Query: 631 SLPTCEECDMKFNSTVCYLMH 693
+C EC F +T H
Sbjct: 552 PYFSCTECKRHFRNTAQLKQH 572
>sp|Q9UTL5|TF3A_SCHPO Transcription factor IIIA (Factor A) (TFIIIA)
Length = 374
Score = 57.4 bits (137), Expect = 5e-08
Identities = 69/309 (22%), Positives = 113/309 (36%), Gaps = 27/309 (8%)
Frame = +1
Query: 49 TKIETFSC--DVCQLKFKSLRARDSHATAEHKGLKLFCC--KVCNLSFTTHILLRKHAQK 216
T ++ FSC D C +F + + + H H+ K + C + C+ F+ H LR H
Sbjct: 78 TNVKPFSCHYDGCDAQFYTQQHLERHIEV-HRKPKPYACTWEGCDECFSKHQQLRSHISA 136
Query: 217 YHIDNVALAVFGIXXXXXXXXXXXCTF--CPLQFTSRSGLNHHITSGHRS--------EA 366
H + CT+ C L+F ++ L +H+ H E+
Sbjct: 137 CHTHLLPYP---------------CTYQDCELRFATKQKLQNHVNRAHEKIISYSCPHES 181
Query: 367 DTPQVLSDFLTKLIAADPNFSPQSCLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFA 546
+ ++L SC IC L H + HQ T E +
Sbjct: 182 CVGHEGFEKWSQLQNHIREAHVPSCSICGRQFKTAAHLRHHVVLHQ----TTLEERKTYH 237
Query: 547 CP-KCCRLFFGKDGKSYLKDHYNIVHLQKSLPTCEECDMKF----------NSTVCYLMH 693
CP + C+ F + S LK H +++H C+ C KF C H
Sbjct: 238 CPMEGCKKSFTRS--SALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTCKKAH 295
Query: 694 RKYVKNCSKK--TTDQLKIEDPYEKLNDPSKLAFVCSRCQTLIAGHAAETRFEEHKLECC 867
+ Y+ C K + + I D EK + ++ V + + GH ++E + C
Sbjct: 296 KPYINECGIKHDGIEGVAIHDQKEKELSSNLVSDVAKKIINEVTGHG----YKEAREYSC 351
Query: 868 SITDKN*RF 894
S + N RF
Sbjct: 352 SFPECNYRF 360
>sp|P18714|ZG20_XENLA Gastrula zinc finger protein XFG20-1 (XLCGF20.1)
Length = 675
Score = 55.5 bits (132), Expect = 2e-07
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 7/202 (3%)
Frame = +1
Query: 64 FSCDVCQLKFKSLRARDSHATAEHKGLKLFCCKVCNLSFTTHILLRKHAQKYHIDNVALA 243
+SC+ C F DSH H G K F C C F+ L KH + + +D L
Sbjct: 146 YSCEQCGKSFAHKCVLDSHQRT-HTGDKPFSCTECGKKFSQRGNLHKHLKTHKLDQPHL- 203
Query: 244 VFGIXXXXXXXXXXXCTFCPLQFTSRSGLNHH--ITSGHRSEADTPQVLSDFLTKLIAAD 417
C C F+ +S L H I S R ++ + SD L+
Sbjct: 204 ---------------CAECGKTFSFKSTLLEHQKIHSEIRPLSEFGKTFSD-AHNLLKHQ 247
Query: 418 PNFS----PQSCLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFACPKCCRLFFGKDG 585
F+ P C C EI +NE EL H H T E +P F C KC +F
Sbjct: 248 STFTEEQKPFPCTECGEIFSNEHELLTHQSTH-----TEEQKP--FPCTKCWGIF---SN 297
Query: 586 KSYLKDHYNI-VHLQKSLPTCE 648
+ L+ H + QKSLP+ E
Sbjct: 298 EHELRTHQSTHTEGQKSLPSTE 319
Score = 39.7 bits (91), Expect = 0.012
Identities = 61/274 (22%), Positives = 89/274 (32%), Gaps = 8/274 (2%)
Frame = +1
Query: 64 FSCDVCQLKFKSLRARDSHATAEHKGLKLFCCKVCNLSFTTHILLRKHAQKYHIDNVALA 243
F+C C F +SH A HKG K F C VC+ +F L H Y + +
Sbjct: 62 FTCTECGKTFTRKPNYESHIRA-HKGEKPFSCMVCDKAFAWKSNLLVH---YSVHS---- 113
Query: 244 VFGIXXXXXXXXXXXCTFCPLQFTSRSGLNHHITSGHRSEADTPQVLSDFLTKLIAADPN 423
CT C F++++ L H+ H E
Sbjct: 114 ---------GEKPFSCTECDKTFSNKAQLEKHLRV-HTGE-------------------- 143
Query: 424 FSPQSCLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFACPKCCRLFFGKDG-KSYLK 600
P SC C + ++ LD H H + F+C +C + F + +LK
Sbjct: 144 -KPYSCEQCGKSFAHKCVLDSHQRTHTGD--------KPFSCTECGKKFSQRGNLHKHLK 194
Query: 601 DH-YNIVHLQKSLPTCEECDMKFNSTVCYLMHRKYVKNCSKKTTDQLKIEDPYEKLNDPS 777
H + HL C EC F+ L H+K + D + L S
Sbjct: 195 THKLDQPHL------CAECGKTFSFKSTLLEHQKIHSEIRPLSEFGKTFSDAHNLLKHQS 248
Query: 778 KLA-----FVCSRCQTLIAG-HAAETRFEEHKLE 861
F C+ C + + H T H E
Sbjct: 249 TFTEEQKPFPCTECGEIFSNEHELLTHQSTHTEE 282
Score = 36.6 bits (83), Expect = 0.10
Identities = 50/256 (19%), Positives = 86/256 (33%), Gaps = 27/256 (10%)
Frame = +1
Query: 112 DSHATA--EHKGLKLFCCKVCNLSF------TTHILLRKHAQKYHIDNVA------LAVF 249
D+H + +H G K F C C SF H+++ + YH ++
Sbjct: 409 DNHQSPSKDHTGEKPFSCSECGKSFFYKSVLKDHLVVHTGKKPYHCIECGRSYTHQSSLK 468
Query: 250 GIXXXXXXXXXXXCTFC-PLQFTSRSGLNHHITSGHR----SEADTPQVLSDFLTKLIAA 414
C C L S+ L++ + SG + +E D + L
Sbjct: 469 SHQRTHTGVKAFSCNLCDKLSIISKLRLHYRVHSGEKPYPCTECDKTFTKKEQLESHYKV 528
Query: 415 DPNFSPQSCLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFACPKCCRLFFGKDGKSY 594
P C C + +++ L +H H + F+C +C + F K
Sbjct: 529 HTGEKPYPCQQCGKSFSHKSVLKLHLRTHTGD--------KPFSCTECGKTFTRKPN--- 577
Query: 595 LKDHYNIVHLQKSLPTCEECDMKF----NSTVCYLMHRK----YVKNCSKKTTDQLKIED 750
+ + H K +C EC +F N Y MH C K T + +
Sbjct: 578 -YESHLTTHTGKKPFSCTECGKEFAWKRNLEAHYKMHTGEKPFTCTECGKTFTWKSNLRS 636
Query: 751 PYEKLNDPSKLAFVCS 798
Y ++ S + + C+
Sbjct: 637 HYTTVHGISPIQYACT 652
Score = 33.9 bits (76), Expect = 0.65
Identities = 21/61 (34%), Positives = 27/61 (44%)
Frame = +1
Query: 40 TSPTKIETFSCDVCQLKFKSLRARDSHATAEHKGLKLFCCKVCNLSFTTHILLRKHAQKY 219
T+ T + FSC C +F R ++H H G K F C C +FT LR H
Sbjct: 583 TTHTGKKPFSCTECGKEFAWKRNLEAHYKM-HTGEKPFTCTECGKTFTWKSNLRSHYTTV 641
Query: 220 H 222
H
Sbjct: 642 H 642
>sp|Q9NQX1|PRDM5_HUMAN PR-domain zinc finger protein 5
Length = 630
Score = 55.5 bits (132), Expect = 2e-07
Identities = 46/212 (21%), Positives = 74/212 (34%)
Frame = +1
Query: 61 TFSCDVCQLKFKSLRARDSHATAEHKGLKLFCCKVCNLSFTTHILLRKHAQKYHIDNVAL 240
TF C C FK + H H+ K + C++CN +F T +LR H + + + +
Sbjct: 431 TFKCHHCDATFKRKDTLNVHVQVVHERHKKYRCELCNKAFVTPSVLRSHKKTHTGEKEKI 490
Query: 241 AVFGIXXXXXXXXXXXCTFCPLQFTSRSGLNHHITSGHRSEADTPQVLSDFLTKLIAADP 420
C +C +F S L HI S H E
Sbjct: 491 ----------------CPYCGQKFASSGTLRVHIRS-HTGE------------------- 514
Query: 421 NFSPQSCLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFACPKCCRLFFGKDGKSYLK 600
P C C++ + L +H H +E + C +C + F K G
Sbjct: 515 --RPYQCPYCEKGFSKNDGLKMHIRTHTRE--------KPYKCSECSKAFSQKRG----L 560
Query: 601 DHYNIVHLQKSLPTCEECDMKFNSTVCYLMHR 696
D + H + C+ CD+ F+ + H+
Sbjct: 561 DEHKRTHTGEKPFQCDVCDLAFSLKKMLIRHK 592
Score = 42.7 bits (99), Expect = 0.001
Identities = 30/102 (29%), Positives = 42/102 (41%)
Frame = +1
Query: 49 TKIETFSCDVCQLKFKSLRARDSHATAEHKGLKLFCCKVCNLSFTTHILLRKHAQKYHID 228
T+ + + C C F R D H H G K F C VC+L+F+ +L +H + H
Sbjct: 540 TREKPYKCSECSKAFSQKRGLDEHKRT-HTGEKPFQCDVCDLAFSLKKMLIRH-KMTHNP 597
Query: 229 NVALAVFGIXXXXXXXXXXXCTFCPLQFTSRSGLNHHITSGH 354
N LA C FC +FT L H+ + H
Sbjct: 598 NRPLA--------------ECQFCHKKFTRNDYLKVHMDNIH 625
Score = 41.2 bits (95), Expect = 0.004
Identities = 47/214 (21%), Positives = 64/214 (29%)
Frame = +1
Query: 58 ETFSCDVCQLKFKSLRARDSHATAEHKGLKLFCCKVCNLSFTTHILLRKHAQKYHIDNVA 237
E F C C KF S H H + + C++CN SF + H + D
Sbjct: 318 EIFDCQECMKKFISANQLKRHMIT-HSEKRPYNCEICNKSFKRLDQVGAHKVIHSEDK-- 374
Query: 238 LAVFGIXXXXXXXXXXXCTFCPLQFTSRSGLNHHITSGHRSEADTPQVLSDFLTKLIAAD 417
C C F R+ +H + H E
Sbjct: 375 --------------PYKCKLCGKGFAHRNVYKNHKKT-HSEER----------------- 402
Query: 418 PNFSPQSCLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFACPKCCRLFFGKDGKSYL 597
P C C+ + F L H + H E F C C F KD L
Sbjct: 403 ----PFQCEECKALFRTPFSLQRHLLIHNSE--------RTFKCHHCDATFKRKDT---L 447
Query: 598 KDHYNIVHLQKSLPTCEECDMKFNSTVCYLMHRK 699
H +VH + CE C+ F + H+K
Sbjct: 448 NVHVQVVHERHKKYRCELCNKAFVTPSVLRSHKK 481
Score = 37.4 bits (85), Expect = 0.059
Identities = 45/228 (19%), Positives = 77/228 (33%), Gaps = 6/228 (2%)
Frame = +1
Query: 28 TPNSTSPTKIETFSCDVCQLKFKSLRARDSHATAEHKGLKLFCCKV--CNLSFTTHILLR 201
T S+ +F C VC F S + + H +G F CK C + L+
Sbjct: 222 TAKSSLKESSRSFQCSVCNSSFSSASSFEQHQET-CRGDAKFVCKADSCGKRLKSKDALK 280
Query: 202 KHAQKYHIDNVALAVFGIXXXXXXXXXXXCTFCPLQFTSRSGLNHHITSGHR----SEAD 369
+H + H + + C+ C + +S S L H H E
Sbjct: 281 RHQENVHTGDPKKKLI-------------CSVCNKKCSSASSLQEH-RKIHEIFDCQECM 326
Query: 370 TPQVLSDFLTKLIAADPNFSPQSCLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFAC 549
+ ++ L + + P +C IC + ++ H + H E + C
Sbjct: 327 KKFISANQLKRHMITHSEKRPYNCEICNKSFKRLDQVGAHKVIHS--------EDKPYKC 378
Query: 550 PKCCRLFFGKDGKSYLKDHYNIVHLQKSLPTCEECDMKFNSTVCYLMH 693
C + G ++ K+H H ++ CEEC F + H
Sbjct: 379 KLCGK---GFAHRNVYKNHKK-THSEERPFQCEECKALFRTPFSLQRH 422
Score = 35.0 bits (79), Expect = 0.29
Identities = 46/213 (21%), Positives = 70/213 (32%), Gaps = 6/213 (2%)
Frame = +1
Query: 46 PTKIETFSCDVCQLKFKSLRARDSHA------TAEHKGLKLFCCKVCNLSFTTHILLRKH 207
PT+ + F C C KF +A H ++ + + F C VCN SF++ +H
Sbjct: 193 PTEEKEFKCKNCGKKFPVKQALQRHVLQCTAKSSLKESSRSFQCSVCNSSFSSASSFEQH 252
Query: 208 AQKYHIDNVALAVFGIXXXXXXXXXXXCTFCPLQFTSRSGLNHHITSGHRSEADTPQVLS 387
+ D C + S+ L H + H
Sbjct: 253 QETCRGD--------------AKFVCKADSCGKRLKSKDALKRHQENVH---------TG 289
Query: 388 DFLTKLIAADPNFSPQSCLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFACPKCCRL 567
D KLI C +C + ++ L H H+ F C +C +
Sbjct: 290 DPKKKLI----------CSVCNKKCSSASSLQEHRKIHE-----------IFDCQECMKK 328
Query: 568 FFGKDGKSYLKDHYNIVHLQKSLPTCEECDMKF 666
F + LK H I H +K CE C+ F
Sbjct: 329 FI---SANQLKRHM-ITHSEKRPYNCEICNKSF 357
Score = 33.9 bits (76), Expect = 0.65
Identities = 47/208 (22%), Positives = 68/208 (32%), Gaps = 11/208 (5%)
Frame = +1
Query: 151 FCCKVCNLSFTTHILLRKHAQKYHIDNVALAVFGIXXXXXXXXXXXCTFCPLQFTSRSGL 330
+ C C SFT+ +L +H Q H F C C +F + L
Sbjct: 167 YACPQCESSFTSEDILAEHLQTLHQKPTEEKEF------------KCKNCGKKFPVKQAL 214
Query: 331 NHHITSGHRSEADTPQVLSDFLTKLIAADPNFSPQSCLICQEIMNNEFELDIHTIEHQKE 510
H+ T + + C +C N+ F +HQ+
Sbjct: 215 QRHVLQ---------------CTAKSSLKESSRSFQCSVC----NSSFSSASSFEQHQET 255
Query: 511 CQTAEVEPTQFAC--PKCCRLFFGKDGKSYLKDHYNIVHL--QKSLPTCEECDMKFNSTV 678
C+ +F C C + KD LK H VH K C C+ K +S
Sbjct: 256 CR----GDAKFVCKADSCGKRLKSKDA---LKRHQENVHTGDPKKKLICSVCNKKCSSAS 308
Query: 679 CYLMHRKY-----VKNCSKK--TTDQLK 741
HRK + C KK + +QLK
Sbjct: 309 SLQEHRKIHEIFDCQECMKKFISANQLK 336
>sp|Q9UJL9|ZN643_HUMAN Zinc finger protein 643
Length = 432
Score = 52.4 bits (124), Expect = 2e-06
Identities = 59/265 (22%), Positives = 92/265 (34%), Gaps = 8/265 (3%)
Frame = +1
Query: 34 NSTSPTKIETFSCDVCQLKFKSLRARDSHATAEHKGLKLFCCKVCNLSFTTHILLRKHAQ 213
+S S TK++TF C++C+ FK L H H G K F CK C +F+ L H Q
Sbjct: 167 HSRSYTKMKTFECNICEKIFKQLIHLTEHMRI-HTGEKPFRCKECGKAFSQSSSLIPH-Q 224
Query: 214 KYHIDNVALAVFGIXXXXXXXXXXXCTFCPLQFTSRSGLNHHITSGHRSEADTPQVLSDF 393
+ H C C F S L H+ H E
Sbjct: 225 RIHTGE---------------KPYECKECGKTFRHPSSLTQHVRI-HTGE---------- 258
Query: 394 LTKLIAADPNFSPQSCLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFACPKCCRLFF 573
P C +C++ + L H H +E F C C + FF
Sbjct: 259 -----------KPYECRVCEKAFSQSIGLIQHLRTHVRE--------KPFTCKDCGKAFF 299
Query: 574 GKDGKSYLKDHYNIVHLQKSLPTCEECDMKFNSTVCYLMHRK--------YVKNCSKKTT 729
+L+ H I+H C C F+ + H++ K C K +
Sbjct: 300 ---QIRHLRQH-EIIHTGVKPYICNVCSKTFSHSTYLTQHQRTHTGERPYKCKECGKAFS 355
Query: 730 DQLKIEDPYEKLNDPSKLAFVCSRC 804
++ + +++++ K + CS C
Sbjct: 356 QRIHL-SIHQRVHTGVK-PYECSHC 378
>sp|P08970|SUHW_DROME Suppressor of hairy wing protein
Length = 941
Score = 52.0 bits (123), Expect = 2e-06
Identities = 48/214 (22%), Positives = 72/214 (33%), Gaps = 2/214 (0%)
Frame = +1
Query: 67 SCDVCQLKFKSLRARDSHATAEHKGLKLFCCKVCNLSFTTHILLRKHAQKYHIDNVALAV 246
+C C FK+ + + H H F C +CN + + LL H +++ A
Sbjct: 291 NCPDCPKSFKTQTSYERHIFITHSEFSDFPCSICNANLRSEALLALHEEQHKSRGKPYA- 349
Query: 247 FGIXXXXXXXXXXXCTFCPLQFTSRSGLNHH--ITSGHRSEADTPQVLSDFLTKLIAADP 420
C C FT L H +S +E DT
Sbjct: 350 --------------CKICGKDFTRSYHLKRHQKYSSCSSNETDT---------------- 379
Query: 421 NFSPQSCLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFACPKCCRLFFGKDGKSYLK 600
SC +C + L H +H T V+ ++ C C F+ S L
Sbjct: 380 ----MSCKVCDRVFYRLDNLRSHLKQH---LGTQVVKKPEYMCHTCKNCFY---SLSTLN 429
Query: 601 DHYNIVHLQKSLPTCEECDMKFNSTVCYLMHRKY 702
H H + C+ CD KF++ V HR+Y
Sbjct: 430 IHIR-THTGEKPFDCDLCDKKFSALVALKKHRRY 462
Score = 44.3 bits (103), Expect = 5e-04
Identities = 48/228 (21%), Positives = 73/228 (32%), Gaps = 11/228 (4%)
Frame = +1
Query: 64 FSCDVCQLKFKSLRARDSHATAEHKGLKLFCCKVCNLSFTTHILLRKHAQKYHIDNVALA 243
F CD+C KF +L A H H G K + C VCN +F +L +H +++
Sbjct: 441 FDCDLCDKKFSALVALKKHRRY-HTGEKPYSCTVCNQAFAVKEVLNRHMKRH-------- 491
Query: 244 VFGIXXXXXXXXXXXCTFCPLQFTSRSGLNHHITSGHRSEADTPQVLSDFLTKLIAADPN 423
C C F + L H + +
Sbjct: 492 --------TGERPHKCDECGKSFIQATQLRTH------------------------SKTH 519
Query: 424 FSPQSCLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFACPKCCRLF--------FGK 579
P C C E E +L+ H H + + F+C +C R F
Sbjct: 520 IRPFPCEQCDEKFKTEKQLERHVKTHSR------TKRPVFSCAECKRNFRTPALLKEHMD 573
Query: 580 DGKSYLKDHYNIVHLQKSL---PTCEECDMKFNSTVCYLMHRKYVKNC 714
+GK K + + + C CD F+S+ H + V C
Sbjct: 574 EGKHSPKQQRSSMRSAVKIMERTDCAICDKNFDSSDTLRRHIRTVHEC 621
Score = 43.9 bits (102), Expect = 6e-04
Identities = 31/116 (26%), Positives = 45/116 (38%), Gaps = 7/116 (6%)
Frame = +1
Query: 43 SPTKIETFSCDVCQLKFKSLRARDSHATAEHKGLK-LFCCKVCNLSFTTHILLR------ 201
S T I F C+ C KFK+ + + H + + +F C C +F T LL+
Sbjct: 516 SKTHIRPFPCEQCDEKFKTEKQLERHVKTHSRTKRPVFSCAECKRNFRTPALLKEHMDEG 575
Query: 202 KHAQKYHIDNVALAVFGIXXXXXXXXXXXCTFCPLQFTSRSGLNHHITSGHRSEAD 369
KH+ K ++ AV C C F S L HI + H + D
Sbjct: 576 KHSPKQQRSSMRSAV-------KIMERTDCAICDKNFDSSDTLRRHIRTVHECDPD 624
Score = 40.0 bits (92), Expect = 0.009
Identities = 55/278 (19%), Positives = 90/278 (32%), Gaps = 47/278 (16%)
Frame = +1
Query: 49 TKIETFSCDVCQLKFKSLRARDSHATAEHKGLKLFCCKVCNLSFTTHILLRKHAQK---- 216
++ F C +C +S H K + CK+C FT L++H +
Sbjct: 314 SEFSDFPCSICNANLRSEALLALHEEQHKSRGKPYACKICGKDFTRSYHLKRHQKYSSCS 373
Query: 217 ----------------YHIDNVALAV-FGIXXXXXXXXXXXCTFCPLQFTSRSGLNHHIT 345
Y +DN+ + + C C F S S LN HI
Sbjct: 374 SNETDTMSCKVCDRVFYRLDNLRSHLKQHLGTQVVKKPEYMCHTCKNCFYSLSTLNIHIR 433
Query: 346 SGHRSEADTPQVLSDFLTKLIAA-------DPNFSPQSCLICQEIMNNEFELDIHTIEHQ 504
+ H E L D + A P SC +C + + L+ H H
Sbjct: 434 T-HTGEKPFDCDLCDKKFSALVALKKHRRYHTGEKPYSCTVCNQAFAVKEVLNRHMKRHT 492
Query: 505 -------KECQTAEVEPTQ-----------FACPKCCRLF-FGKDGKSYLKDHYNIVHLQ 627
EC + ++ TQ F C +C F K + ++K H +
Sbjct: 493 GERPHKCDECGKSFIQATQLRTHSKTHIRPFPCEQCDEKFKTEKQLERHVKTH---SRTK 549
Query: 628 KSLPTCEECDMKFNSTVCYLMHRKYVKNCSKKTTDQLK 741
+ + +C EC F + H K+ K+ ++
Sbjct: 550 RPVFSCAECKRNFRTPALLKEHMDEGKHSPKQQRSSMR 587
>sp|Q9Y473|ZN175_HUMAN Zinc finger protein 175 (Zinc finger protein OTK18)
Length = 711
Score = 51.2 bits (121), Expect = 4e-06
Identities = 65/284 (22%), Positives = 104/284 (36%), Gaps = 14/284 (4%)
Frame = +1
Query: 49 TKIETFSCDVCQLKFKSLRARDSHATAEHKGLKLFCCKVCNLSFTTHILLRKHAQKYHID 228
T+ + + C C F + + H H KL+ C C F+ + L H QK H
Sbjct: 358 TRKKPYKCHDCGKAFFQMLSLFRHQRT-HSREKLYECSECGKGFSQNSTLIIH-QKIHTG 415
Query: 229 NVALAVFGIXXXXXXXXXXXCTFCPLQFTSRSGLNHH--ITSGHRS----EADTPQVLSD 390
A C+ C FT +S L+ H I SG +S E +
Sbjct: 416 ERQYA---------------CSECGKAFTQKSTLSLHQRIHSGQKSYVCIECGQAFIQKA 460
Query: 391 FLTKLIAADPNFSPQSCLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFACPKCCRLF 570
L + P C C + ++ +LDIH H E + C C + F
Sbjct: 461 HLIVHQRSHTGEKPYQCHNCGKSFISKSQLDIHHRIHTGE--------KPYECSDCGKTF 512
Query: 571 FGKDGKSYLKDHYNIVHLQKSLPTCEECDMKFNSTVCYLMHRKY--------VKNCSKKT 726
KS+L H I H + C EC FN MH++ C K
Sbjct: 513 ---TQKSHLNIHQKI-HTGERHHVCSECGKAFNQKSILSMHQRIHTGEKPYKCSECGKAF 568
Query: 727 TDQLKIEDPYEKLNDPSKLAFVCSRCQTLIAGHAAETRFEEHKL 858
T + + ++ +++++ K +VC+ C G + F +H++
Sbjct: 569 TSKSQFKE-HQRIHTGEK-PYVCTECGKAFNG---RSNFHKHQI 607
Score = 33.1 bits (74), Expect = 1.1
Identities = 45/209 (21%), Positives = 61/209 (29%)
Frame = +1
Query: 70 CDVCQLKFKSLRARDSHATAEHKGLKLFCCKVCNLSFTTHILLRKHAQKYHIDNVALAVF 249
C C F H H G K + C C +FT+ ++H Q+ H
Sbjct: 533 CSECGKAFNQKSILSMHQRI-HTGEKPYKCSECGKAFTSKSQFKEH-QRIHTGE------ 584
Query: 250 GIXXXXXXXXXXXCTFCPLQFTSRSGLNHHITSGHRSEADTPQVLSDFLTKLIAADPNFS 429
CT C F RS + H + R
Sbjct: 585 ---------KPYVCTECGKAFNGRSNFHKHQITHTRER---------------------- 613
Query: 430 PQSCLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFACPKCCRLFFGKDGKSYLKDHY 609
P C C + + EL H H E + C C + F K LK H
Sbjct: 614 PFVCYKCGKAFVQKSELITHQRTHMGE--------KPYECLDCGKSF---SKKPQLKVHQ 662
Query: 610 NIVHLQKSLPTCEECDMKFNSTVCYLMHR 696
I H + C EC FN+ + H+
Sbjct: 663 RI-HTGERPYVCSECGKAFNNRSNFNKHQ 690
Score = 30.0 bits (66), Expect = 9.4
Identities = 41/190 (21%), Positives = 71/190 (37%), Gaps = 18/190 (9%)
Frame = +1
Query: 289 CTFCPLQFTSRSGLN-----HHITSGHR----SEADTPQV-LSDFLTKLIAADPNFSPQS 438
C+ C FT +S L H + + H +A PQ+ LS +LT P
Sbjct: 281 CSECGGSFTQKSHLFAQQRIHSVGNLHECGKCGKAFMPQLKLSVYLTDHTGDIPCI---- 336
Query: 439 CLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFACPKCCRLFFGKDGKSYLKDHYNIV 618
C C ++ EL H H ++ + C C + FF + +
Sbjct: 337 CKECGKVFIQRSELLTHQKTHTRK--------KPYKCHDCGKAFF----QMLSLFRHQRT 384
Query: 619 HLQKSLPTCEECDMKFNSTVCYLMHRKY--------VKNCSKKTTDQLKIEDPYEKLNDP 774
H ++ L C EC F+ ++H+K C K T + + +++++
Sbjct: 385 HSREKLYECSECGKGFSQNSTLIIHQKIHTGERQYACSECGKAFTQKSTL-SLHQRIHSG 443
Query: 775 SKLAFVCSRC 804
K ++VC C
Sbjct: 444 QK-SYVCIEC 452
>sp|P16373|ZFP59_MOUSE Zinc finger protein 59 (Zfp-59) (Zinc finger protein Mfg-2)
Length = 406
Score = 50.8 bits (120), Expect = 5e-06
Identities = 60/267 (22%), Positives = 98/267 (36%), Gaps = 8/267 (2%)
Frame = +1
Query: 28 TPNSTSPTKIETFSCDVCQLKFKSLRARDSHATAEHKGLKLFCCKVCNLSFTTHILLRKH 207
T + +S ++ + F C+ C KF++ R H H G K F C VC +F + L +H
Sbjct: 129 TRHQSSHSEEKPFECEECGKKFRTARHLVKHQRI-HSGEKPFECNVCGSAFRLQLYLSEH 187
Query: 208 AQKYHIDNVALAVFGIXXXXXXXXXXXCTFCPLQFTSRSGLNHHITSGHRSEADTPQVLS 387
QK H++ L C C F + L+ H+ + H E
Sbjct: 188 -QKTHMEEKYL---------------ECNVCGKAFRLQDILSEHLKT-HTEE-------- 222
Query: 388 DFLTKLIAADPNFSPQSCLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFACPKCCRL 567
+P C +C ++++L+ H T + + C +C +
Sbjct: 223 -------------NPFKCKLCGSSFPHKYQLNKHL--------TVHTDGKPYQCKECGKC 261
Query: 568 FFGKDGKSYLKDHYNIVHLQKSLPTCEECDMKFNSTVCYLMHRK--------YVKNCSKK 723
F +S L +H +I H K CE C +T+ + H+K K C K
Sbjct: 262 F---RQRSKLTEHESI-HTGKKPFQCEACGKSLANTL-LIHHQKSHSGERPFECKECGKA 316
Query: 724 TTDQLKIEDPYEKLNDPSKLAFVCSRC 804
++ K+ SK F C C
Sbjct: 317 FLLPSQLNS--HKIVHTSKRPFECKVC 341
>sp|P18722|ZG46_XENLA Gastrula zinc finger protein XLCGF46.1
Length = 280
Score = 50.4 bits (119), Expect = 7e-06
Identities = 52/224 (23%), Positives = 84/224 (37%), Gaps = 6/224 (2%)
Frame = +1
Query: 49 TKIETFSCDVCQLKFKSLRARDSHATAEHKGLKLFCCKVCNLSFTTHILLRKHAQKYHID 228
T+ F C C +KS + +H H G F CK C F LL+KH ++ +
Sbjct: 57 TEETPFVCPECGQGYKSKQGLQNHLLC-HTGETNFTCKECGKKF----LLQKHLNRHKLT 111
Query: 229 NVALAVFGIXXXXXXXXXXXCTFCPLQFTSRSGLNHH--ITSGHR----SEADTPQVLSD 390
+ + F C+ C +F+ + GL H I +G + +E T +
Sbjct: 112 HSSEKPF------------ICSECGKRFSRKDGLGMHQLIHTGEKPYVCTECGTSFRVRP 159
Query: 391 FLTKLIAADPNFSPQSCLICQEIMNNEFELDIHTIEHQKECQTAEVEPTQFACPKCCRLF 570
L + +P C C + +L +H + H E F C KC + F
Sbjct: 160 QLRIHLRTHTRETPFKCEDCGRVFATGTKLQVHKVTHTGE--------KPFTCEKCGKSF 211
Query: 571 FGKDGKSYLKDHYNIVHLQKSLPTCEECDMKFNSTVCYLMHRKY 702
K+ L H + H CEEC F+ +H+++
Sbjct: 212 ---TQKTNLNTH-QLTHTGGKNFKCEECGKCFSRKDYLRVHQRF 251
Score = 36.2 bits (82), Expect = 0.13
Identities = 49/239 (20%), Positives = 82/239 (34%), Gaps = 17/239 (7%)
Frame = +1
Query: 139 GLKLFCCKVCNLSFTTHILLRKHAQKYHIDNVALAVFGIXXXXXXXXXXXCTFCPLQFTS 318
GLK F CK C SF + K + ++ L GI CT C QF
Sbjct: 2 GLKPFACKECGKSF---------SNKAYFESHKLMHAGI-------KPFECTECGKQFLL 45
Query: 319 RSGL-NHHITSGHRSEADTPQVLSDFLTK--------LIAADPNFSPQSCLICQEIMNNE 471
+ L +H + + P+ + +K + NF +C C + +
Sbjct: 46 KQLLKSHQLIHTEETPFVCPECGQGYKSKQGLQNHLLCHTGETNF---TCKECGKKFLLQ 102
Query: 472 FELDIHTIEHQKECQTAEVEPTQFACPKCCRLFFGKDGKSYLKDHYNIVHLQKSLPTCEE 651
L+ H + H E F C +C + F KDG + ++H + C E
Sbjct: 103 KHLNRHKLTHSSE--------KPFICSECGKRFSRKDGLGM----HQLIHTGEKPYVCTE 150
Query: 652 CDMKFNSTVCYLMHRK--------YVKNCSKKTTDQLKIEDPYEKLNDPSKLAFVCSRC 804
C F +H + ++C + K++ K+ + F C +C
Sbjct: 151 CGTSFRVRPQLRIHLRTHTRETPFKCEDCGRVFATGTKLQ--VHKVTHTGEKPFTCEKC 207
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,657,776
Number of Sequences: 369166
Number of extensions: 1980880
Number of successful extensions: 8504
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7528
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9270587090
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)