Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_024_P14
(379 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P06730|IF4E_HUMAN Eukaryotic translation initiation fact... 82 3e-16
sp|Q9N0T5|IF4E_BOVIN Eukaryotic translation initiation fact... 82 3e-16
sp|P29338|IF4E_RABIT Eukaryotic translation initiation fact... 81 6e-16
sp|P63073|IF4E_MOUSE Eukaryotic translation initiation fact... 81 6e-16
sp|P48597|IF4E_XENLA Eukaryotic translation initiation fact... 79 4e-15
sp|Q9DFS6|IF4EA_BRARE Eukaryotic translation initiation fac... 78 5e-15
sp|P48598|IF4E_DROME Eukaryotic translation initiation fact... 74 1e-13
sp|O77210|IF4E_APLCA Eukaryotic translation initiation fact... 74 1e-13
sp|Q9PW28|IF4EB_BRARE Eukaryotic translation initiation fac... 71 7e-13
sp|O45551|IF4E1_CAEEL Eukaryotic translation initiation fac... 71 9e-13
>sp|P06730|IF4E_HUMAN Eukaryotic translation initiation factor 4E (eIF4E) (eIF-4E) (mRNA
cap-binding protein) (eIF-4F 25 kDa subunit)
Length = 217
Score = 82.4 bits (202), Expect = 3e-16
Identities = 36/73 (49%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Frame = +2
Query: 8 WLEILMLLVGETFEDDSDEICGAVFNKRGKGDRISVWTTDCSSAEAIKRIGEKVKEAVG- 184
WLE L+ L+GE+F+D SD++CGAV N R KGD+I++WTT+C + EA+ IG KE +G
Sbjct: 130 WLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGL 189
Query: 185 -STCSVEYMAHAD 220
+ Y +HAD
Sbjct: 190 PPKIVIGYQSHAD 202
>sp|Q9N0T5|IF4E_BOVIN Eukaryotic translation initiation factor 4E (eIF4E) (eIF-4E) (mRNA
cap-binding protein)
Length = 217
Score = 82.4 bits (202), Expect = 3e-16
Identities = 36/73 (49%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Frame = +2
Query: 8 WLEILMLLVGETFEDDSDEICGAVFNKRGKGDRISVWTTDCSSAEAIKRIGEKVKEAVG- 184
WLE L+ L+GE+F+D SD++CGAV N R KGD+I++WTT+C + EA+ IG KE +G
Sbjct: 130 WLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGL 189
Query: 185 -STCSVEYMAHAD 220
+ Y +HAD
Sbjct: 190 PPKIVIGYQSHAD 202
>sp|P29338|IF4E_RABIT Eukaryotic translation initiation factor 4E (eIF4E) (eIF-4E) (mRNA
cap-binding protein) (eIF-4F 25 kDa subunit)
Length = 217
Score = 81.3 bits (199), Expect = 6e-16
Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Frame = +2
Query: 8 WLEILMLLVGETFEDDSDEICGAVFNKRGKGDRISVWTTDCSSAEAIKRIGEKVKEAVG- 184
WLE L+ L+GE+F+D SD++CGAV N R KGD+I++WTT+C + +A+ IG KE +G
Sbjct: 130 WLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGL 189
Query: 185 -STCSVEYMAHAD 220
+ Y +HAD
Sbjct: 190 PPKIVIGYQSHAD 202
>sp|P63073|IF4E_MOUSE Eukaryotic translation initiation factor 4E (eIF4E) (eIF-4E) (mRNA
cap-binding protein) (eIF-4F 25 kDa subunit)
sp|P63074|IF4E_RAT Eukaryotic translation initiation factor 4E (eIF4E) (eIF-4E) (mRNA
cap-binding protein) (eIF-4F 25 kDa subunit)
Length = 217
Score = 81.3 bits (199), Expect = 6e-16
Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Frame = +2
Query: 8 WLEILMLLVGETFEDDSDEICGAVFNKRGKGDRISVWTTDCSSAEAIKRIGEKVKEAVG- 184
WLE L+ L+GE+F+D SD++CGAV N R KGD+I++WTT+C + +A+ IG KE +G
Sbjct: 130 WLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGL 189
Query: 185 -STCSVEYMAHAD 220
+ Y +HAD
Sbjct: 190 PPKIVIGYQSHAD 202
>sp|P48597|IF4E_XENLA Eukaryotic translation initiation factor 4E (eIF4E) (eIF-4E) (mRNA
cap-binding protein) (eIF-4F 25 kDa subunit)
Length = 213
Score = 78.6 bits (192), Expect = 4e-15
Identities = 35/73 (47%), Positives = 50/73 (68%), Gaps = 2/73 (2%)
Frame = +2
Query: 8 WLEILMLLVGETFEDDSDEICGAVFNKRGKGDRISVWTTDCSSAEAIKRIGEKVKEAVGS 187
WLE LM L+GE+F++ SD++CGAV N R KGD+I++WTT+ + +A+ IG KE +G
Sbjct: 126 WLETLMCLIGESFDEHSDDVCGAVVNVRAKGDKIAIWTTEFENKDAVTHIGRVYKERLGL 185
Query: 188 TCSV--EYMAHAD 220
V Y +HAD
Sbjct: 186 PAKVVIGYQSHAD 198
>sp|Q9DFS6|IF4EA_BRARE Eukaryotic translation initiation factor 4E-1A (eIF4E-1A) (mRNA
cap-binding protein)
Length = 215
Score = 78.2 bits (191), Expect = 5e-15
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Frame = +2
Query: 8 WLEILMLLVGETFEDDSDEICGAVFNKRGKGDRISVWTTDCSSAEAIKRIGEKVKEAVG- 184
WLE L+ LVGE F+D SD++CGAV N R KGD+I++WTTD + +AI IG KE +G
Sbjct: 128 WLETLLCLVGEAFDDHSDDVCGAVVNIRTKGDKIAIWTTDYENKDAIVHIGRVYKERLGV 187
Query: 185 -STCSVEYMAHAD 220
+ Y +HAD
Sbjct: 188 PPKVIIGYQSHAD 200
>sp|P48598|IF4E_DROME Eukaryotic translation initiation factor 4E (eIF4E) (eIF-4E) (mRNA
cap-binding protein) (eIF-4F 25 kDa subunit)
Length = 259
Score = 73.9 bits (180), Expect = 1e-13
Identities = 35/73 (47%), Positives = 51/73 (69%), Gaps = 2/73 (2%)
Frame = +2
Query: 8 WLEILMLLVGETFEDDSDEICGAVFNKRGKGDRISVWTTDCSSAEAIKRIGEKVKEA--V 181
WL++L+ L+GE F D SD+ICGAV N RGK ++IS+WT D ++ EA IG K+++A +
Sbjct: 173 WLDVLLCLIGEAF-DHSDQICGAVINIRGKSNKISIWTADGNNEEAALEIGHKLRDALRL 231
Query: 182 GSTCSVEYMAHAD 220
G S++Y H D
Sbjct: 232 GRNNSLQYQLHKD 244
>sp|O77210|IF4E_APLCA Eukaryotic translation initiation factor 4E (eIF4E) (eIF-4E) (mRNA
cap-binding protein) (eIF-4F 25 kDa subunit)
Length = 215
Score = 73.6 bits (179), Expect = 1e-13
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Frame = +2
Query: 8 WLEILMLLVGETFEDDSDEICGAVFNKRGKGDRISVWTTDCSSAEAIKRIGEKVKE--AV 181
WLE L+ L+GE F++ S+EICGA N R KGD++ +WT D EA K+IG K+KE +V
Sbjct: 128 WLETLLCLIGEGFDEHSEEICGATVNIRNKGDKLGLWTRDAQKTEATKKIGIKLKESLSV 187
Query: 182 GSTCSVEYMAHAD 220
+ + AH+D
Sbjct: 188 PPKIVIGFQAHSD 200
>sp|Q9PW28|IF4EB_BRARE Eukaryotic translation initiation factor 4E-1B (eIF4E-1B) (eIF4E)
Length = 214
Score = 71.2 bits (173), Expect = 7e-13
Identities = 33/73 (45%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Frame = +2
Query: 8 WLEILMLLVGETFEDDSDEICGAVFNKRGKGDRISVWTTDCSSAEAIKRIGEKVKEAVG- 184
WLE L+ L+GE F S +ICG+V N R KGD+I++WT++ + E + IG K KE++G
Sbjct: 127 WLETLLCLIGEGFSSFSRDICGSVINIRAKGDKIALWTSNAENCETVTYIGRKYKESLGL 186
Query: 185 -STCSVEYMAHAD 220
+ Y AHAD
Sbjct: 187 PQKLVIGYQAHAD 199
>sp|O45551|IF4E1_CAEEL Eukaryotic translation initiation factor 4E-1 (eIF4E-1) (eIF-4E-1)
(mRNA cap-binding protein) (eIF-4F 25 kDa subunit)
Length = 212
Score = 70.9 bits (172), Expect = 9e-13
Identities = 34/56 (60%), Positives = 38/56 (67%)
Frame = +2
Query: 8 WLEILMLLVGETFEDDSDEICGAVFNKRGKGDRISVWTTDCSSAEAIKRIGEKVKE 175
WLEILM LVGE F D + ICG V N RGKG +ISVWT DC+ E RIG +KE
Sbjct: 105 WLEILMALVGEQFGKDMESICGLVCNVRGKGSKISVWTKDCNDDETNMRIGVVLKE 160
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,598,899
Number of Sequences: 369166
Number of extensions: 614874
Number of successful extensions: 2087
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2073
length of database: 68,354,980
effective HSP length: 92
effective length of database: 51,359,360
effective search space used: 1694858880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)