Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_024_L02
(448 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q05870|MYSP_SCHJA Paramyosin (Antigen Sj97) 206 1e-53
sp|P06198|MYSP_SCHMA Paramyosin 206 2e-53
sp|P35417|MYSP_ECHGR Paramyosin 186 2e-47
sp|Q8T305|MYSP_TAESA Paramyosin 186 2e-47
sp|P35418|MYSP_TAESO Paramyosin (Antigen B) (AgB) 186 2e-47
sp|O96064|MYSP_MYTGA Paramyosin 145 4e-35
sp|P02565|MYH3_CHICK Myosin heavy chain, fast skeletal musc... 125 3e-29
sp|P13538|MYSS_CHICK Myosin heavy chain, skeletal muscle, a... 121 6e-28
sp|P12847|MYH3_RAT Myosin heavy chain, fast skeletal muscle... 120 1e-27
sp|Q90339|MYSS_CYPCA Myosin heavy chain, fast skeletal muscle 120 1e-27
>sp|Q05870|MYSP_SCHJA Paramyosin (Antigen Sj97)
Length = 866
Score = 206 bits (525), Expect = 1e-53
Identities = 107/148 (72%), Positives = 127/148 (85%)
Frame = +3
Query: 3 YATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVV 182
+ATREG+R +QKLQ R+RELE +F+ E RRCK+ALAQARKFERQ+KELQ QA+DDRRMV+
Sbjct: 720 FATREGRRMVQKLQARVRELEAEFDGESRRCKDALAQARKFERQYKELQTQAEDDRRMVL 779
Query: 183 ELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRA 362
ELQDLLDKTQ+KM+AYKRQLEE+E+VS + MNKYRKAQQQIE+AEHRADMAER +TVRR
Sbjct: 780 ELQDLLDKTQMKMKAYKRQLEEMEEVSQITMNKYRKAQQQIEEAEHRADMAERTVTVRRV 839
Query: 363 GSVMPGSTYRAISVVRETSTVNTSRGAR 446
G PG RA+SV RE S V ++RG R
Sbjct: 840 G---PGG--RAVSVARELS-VTSNRGMR 861
Score = 33.1 bits (74), Expect = 0.29
Identities = 19/103 (18%), Positives = 47/103 (45%)
Frame = +3
Query: 15 EGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQD 194
E R ++ + + +LE +A + + + + ++ K+L+ DD+RR+ ++
Sbjct: 527 ELSRLKKRYESSIADLEIQLDATNKANANLMKENKNLAQRVKDLETFLDDERRLREAAEN 586
Query: 195 LLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHR 323
L T+ K ++EE+ + A+ ++E+ + R
Sbjct: 587 NLQITEHKRIQLANEVEELRSAMENLERLRKHAETELEETQSR 629
>sp|P06198|MYSP_SCHMA Paramyosin
Length = 866
Score = 206 bits (523), Expect = 2e-53
Identities = 107/147 (72%), Positives = 127/147 (86%)
Frame = +3
Query: 6 ATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVE 185
ATREG+R +QKLQ R+RELE++F+ E RRCK+ALAQARKFERQ+KELQ QA+DDRRMV+E
Sbjct: 721 ATREGRRMVQKLQARVRELESEFDGESRRCKDALAQARKFERQYKELQTQAEDDRRMVLE 780
Query: 186 LQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAG 365
LQDLLDKTQ+KM+AYKRQLEE+E+VS + MNKYRKAQQQIE+AEHRADMAER +TVRR G
Sbjct: 781 LQDLLDKTQMKMKAYKRQLEEMEEVSQITMNKYRKAQQQIEEAEHRADMAERTVTVRRVG 840
Query: 366 SVMPGSTYRAISVVRETSTVNTSRGAR 446
PG RA+SV RE S V ++RG R
Sbjct: 841 ---PGG--RAVSVARELS-VTSNRGMR 861
Score = 33.9 bits (76), Expect = 0.17
Identities = 24/122 (19%), Positives = 53/122 (43%), Gaps = 22/122 (18%)
Frame = +3
Query: 24 RAIQKLQVRLRELETDFEAEQRRCKEA----------------------LAQARKFERQF 137
R I++L V + E+E +++E R K+ + + + ++
Sbjct: 508 RTIEELTVTITEMEVKYKSELSRLKKRYESNIADLEIQLDTANKANANLMKENKNLSQRV 567
Query: 138 KELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAE 317
K+L+ D++RR+ ++ L T+ K ++EEI + A+ ++E+A+
Sbjct: 568 KDLETFLDEERRLREAAENNLQITEHKRLQLANEIEEIRSTLENLERLRKHAETELEEAQ 627
Query: 318 HR 323
R
Sbjct: 628 SR 629
>sp|P35417|MYSP_ECHGR Paramyosin
Length = 863
Score = 186 bits (473), Expect = 2e-47
Identities = 97/148 (65%), Positives = 122/148 (82%)
Frame = +3
Query: 3 YATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVV 182
+ATREG+R +QKLQ R+RELE + + E RR KEA A ARK+ERQFKELQ Q++DD+RM++
Sbjct: 716 FATREGRRMVQKLQNRVRELEAELDGEIRRAKEAFASARKYERQFKELQTQSEDDKRMIL 775
Query: 183 ELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRA 362
ELQDLLDKTQ+KM+AYKRQLEE E+VS + M+KYRKAQQQIE+AEHRADMAER +T++R
Sbjct: 776 ELQDLLDKTQIKMKAYKRQLEEQEEVSQLTMSKYRKAQQQIEEAEHRADMAERTITIKRT 835
Query: 363 GSVMPGSTYRAISVVRETSTVNTSRGAR 446
+ G RA+SVVRE ++V SRG R
Sbjct: 836 ---IGGPGSRAVSVVREINSV--SRGNR 858
Score = 34.3 bits (77), Expect = 0.13
Identities = 21/100 (21%), Positives = 44/100 (44%)
Frame = +3
Query: 24 RAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLD 203
R +K + + ELE + + + + ++ +ELQ +D+RR + L
Sbjct: 526 RLKKKYEATISELEVQLDVANKANASLNRENKALAQRVQELQTALEDERRAREAAESNLQ 585
Query: 204 KTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHR 323
++ K A ++EEI ++ + A+ ++ DA R
Sbjct: 586 VSERKRIALTSEVEEIRSQLELSDRARKNAESELNDANGR 625
>sp|Q8T305|MYSP_TAESA Paramyosin
Length = 863
Score = 186 bits (473), Expect = 2e-47
Identities = 97/148 (65%), Positives = 122/148 (82%)
Frame = +3
Query: 3 YATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVV 182
+ATREG+R +QKLQ R+RELE + + E RR KEA A ARK+ERQFKELQ Q++DD+RM++
Sbjct: 716 FATREGRRMVQKLQNRVRELEAELDGEIRRAKEAFANARKYERQFKELQTQSEDDKRMIL 775
Query: 183 ELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRA 362
ELQDLLDKTQ+KM+AYKRQLEE E+VS + M+KYRKAQQQIE+AEHRADMAER +T++R
Sbjct: 776 ELQDLLDKTQIKMKAYKRQLEEQEEVSQLTMSKYRKAQQQIEEAEHRADMAERTITIKRT 835
Query: 363 GSVMPGSTYRAISVVRETSTVNTSRGAR 446
+ G RA+SVVRE ++V SRG R
Sbjct: 836 ---IGGPGSRAVSVVREINSV--SRGNR 858
Score = 34.3 bits (77), Expect = 0.13
Identities = 21/100 (21%), Positives = 44/100 (44%)
Frame = +3
Query: 24 RAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLD 203
R +K + + ELE + + + + ++ +ELQ +D+RR + L
Sbjct: 526 RLKKKYEATISELEVQLDVANKANANLNRENKTLAQRVQELQAALEDERRAREAAESNLQ 585
Query: 204 KTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHR 323
++ K A ++EEI ++ + A+ ++ DA R
Sbjct: 586 VSERKRIALASEVEEIRSQLELSDRARKNAESELNDANGR 625
>sp|P35418|MYSP_TAESO Paramyosin (Antigen B) (AgB)
Length = 863
Score = 186 bits (473), Expect = 2e-47
Identities = 97/148 (65%), Positives = 122/148 (82%)
Frame = +3
Query: 3 YATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVV 182
+ATREG+R +QKLQ R+RELE + + E RR KEA A ARK+ERQFKELQ Q++DD+RM++
Sbjct: 716 FATREGRRMVQKLQNRVRELEAELDGEIRRAKEAFANARKYERQFKELQTQSEDDKRMIL 775
Query: 183 ELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRA 362
ELQDLLDKTQ+KM+AYKRQLEE E+VS + M+KYRKAQQQIE+AEHRADMAER +T++R
Sbjct: 776 ELQDLLDKTQIKMKAYKRQLEEQEEVSQLTMSKYRKAQQQIEEAEHRADMAERTITIKRT 835
Query: 363 GSVMPGSTYRAISVVRETSTVNTSRGAR 446
+ G RA+SVVRE ++V SRG R
Sbjct: 836 ---IGGPGSRAVSVVREINSV--SRGNR 858
Score = 33.9 bits (76), Expect = 0.17
Identities = 21/100 (21%), Positives = 44/100 (44%)
Frame = +3
Query: 24 RAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLD 203
R +K + + ELE + + + + ++ +ELQ +D+RR + L
Sbjct: 526 RLKKKYEATISELEVQLDVANKANVNLNRENKTLAQRVQELQAALEDERRAREAAESNLQ 585
Query: 204 KTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHR 323
++ K A ++EEI ++ + A+ ++ DA R
Sbjct: 586 VSERKRIALASEVEEIRSQLELSDRARKNAESELNDANGR 625
>sp|O96064|MYSP_MYTGA Paramyosin
Length = 864
Score = 145 bits (366), Expect = 4e-35
Identities = 77/142 (54%), Positives = 102/142 (71%), Gaps = 1/142 (0%)
Frame = +3
Query: 3 YATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVV 182
+A REGKR I KLQ R+R+LE + EA+QRR +EA A ARKFERQ+KE Q +D+DRR V
Sbjct: 729 FAQREGKRQIAKLQARIRDLENELEADQRRLREAAASARKFERQWKETVQASDEDRRQVA 788
Query: 183 ELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHL-TVRR 359
EL + D+ +K + YKR +EE EDV+++ MNKYRKAQ I++AE RADMAE++L TVRR
Sbjct: 789 ELTSITDQLTMKCKTYKRMIEEAEDVASITMNKYRKAQSLIDEAEQRADMAEKNLQTVRR 848
Query: 360 AGSVMPGSTYRAISVVRETSTV 425
+ R++SV RE + V
Sbjct: 849 S---------RSMSVSREVTRV 861
Score = 47.4 bits (111), Expect = 1e-05
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 7/117 (5%)
Frame = +3
Query: 12 REGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVE-- 185
+ RAI +LQ L E+ET ++ E R K +K+E +EL+ D+ R E
Sbjct: 513 KSSARAIDELQRTLVEVETRYKTEISRIK------KKYETDIRELEGALDNANRANAEYL 566
Query: 186 -----LQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAER 341
LQ+ + +L++ RQL++ + +V+ K QQ++EDA + AER
Sbjct: 567 KQIKSLQNRNRELELQLEEATRQLDDTRNQLSVSERKRITIQQELEDARSLLEHAER 623
Score = 35.0 bits (79), Expect = 0.075
Identities = 27/110 (24%), Positives = 47/110 (42%)
Frame = +3
Query: 6 ATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVE 185
A E + I+ LQ R RELE E R+ + Q ER+ +QQ+ +D R ++
Sbjct: 561 ANAEYLKQIKSLQNRNRELELQLEEATRQLDDTRNQLSVSERKRITIQQELEDARSLLEH 620
Query: 186 LQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMA 335
+ + ++ +L E++ T N R+ + I + D A
Sbjct: 621 AERARKNAENELGEVTVRLTEVQLQVTALTNDKRRMEADIAAMQSDLDDA 670
>sp|P02565|MYH3_CHICK Myosin heavy chain, fast skeletal muscle, embryonic
Length = 1940
Score = 125 bits (315), Expect = 3e-29
Identities = 61/121 (50%), Positives = 91/121 (75%)
Frame = +3
Query: 6 ATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVE 185
A + GK+ IQKL+ R+RELE + +AEQ+R EA+ RK+ER+ KEL Q+++DR+ V+
Sbjct: 1809 ALKGGKKQIQKLEARVRELEGEVDAEQKRSAEAVKGVRKYERRVKELTYQSEEDRKNVLR 1868
Query: 186 LQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAG 365
LQDL+DK Q+K+++YKRQ EE E++S V ++K+RK Q ++E+AE RAD+AE + RA
Sbjct: 1869 LQDLVDKLQMKVKSYKRQAEEAEELSNVNLSKFRKIQHELEEAEERADIAESQVNKLRAK 1928
Query: 366 S 368
S
Sbjct: 1929 S 1929
Score = 37.4 bits (85), Expect = 0.015
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 21 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 200
++ I++LQ R+ ELE + EAE+ +A R+ +E+ ++ ++ D+
Sbjct: 1110 QKKIKELQARIEELEEEIEAERTSRAKAEKHRADLSRELEEISERLEEAGGATAAQIDMN 1169
Query: 201 DKTQLKMRAYKRQLEE--IEDVSTVAMNKYRKAQQQIEDAE 317
K + + + +R LEE ++ +T A + + A + E
Sbjct: 1170 KKREAEFQKMRRDLEEATLQHEATAAALRKKHADSTADVGE 1210
Score = 32.7 bits (73), Expect = 0.37
Identities = 18/98 (18%), Positives = 46/98 (46%)
Frame = +3
Query: 36 KLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQL 215
+L++ + +L ++ E+ + R E Q E++ + ++ +R + ++ + Q
Sbjct: 1228 ELKMEIDDLASNMESVSKAKANLEKMCRSLEDQLSEIKTKEEEQQRTINDISAQKARLQT 1287
Query: 216 KMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRAD 329
+ Y RQ+EE + + + + QQIE+ + +
Sbjct: 1288 ESGEYSRQVEEKDALISQLSRGKQAFTQQIEELKRHLE 1325
Score = 32.0 bits (71), Expect = 0.64
Identities = 16/72 (22%), Positives = 36/72 (50%)
Frame = +3
Query: 39 LQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLK 218
LQ++++ + RC + + + E + KEL ++A+D+ M EL K + +
Sbjct: 892 LQLQVQAEADGLADAEERCDQLIKTKIQLEAKIKELTERAEDEEEMNAELTAKKRKLEDE 951
Query: 219 MRAYKRQLEEIE 254
K+ ++++E
Sbjct: 952 CSELKKDIDDLE 963
>sp|P13538|MYSS_CHICK Myosin heavy chain, skeletal muscle, adult
Length = 1939
Score = 121 bits (304), Expect = 6e-28
Identities = 57/121 (47%), Positives = 89/121 (73%)
Frame = +3
Query: 6 ATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVE 185
A + GK+ +QKL+ R+RELE + ++EQ+R EA+ RK+ER+ KEL Q ++DR+ ++
Sbjct: 1807 ALKGGKKQLQKLEARVRELEGEVDSEQKRSAEAVKGVRKYERRVKELTYQCEEDRKNILR 1866
Query: 186 LQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAG 365
LQDL+DK Q+K+++YKRQ EE E++S V ++K+RK Q ++E+AE RAD+AE + R
Sbjct: 1867 LQDLVDKLQMKVKSYKRQAEEAEELSNVNLSKFRKIQHELEEAEERADIAESQVNKLRVK 1926
Query: 366 S 368
S
Sbjct: 1927 S 1927
Score = 36.6 bits (83), Expect = 0.026
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 21 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 200
++ I++LQ R+ ELE + EAE+ +A R+ +E+ ++ ++ ++
Sbjct: 1108 QKKIKELQARIEELEEEIEAERTSRAKAEKHRADLSRELEEISERLEEAGGATAAQIEMN 1167
Query: 201 DKTQLKMRAYKRQLEE--IEDVSTVAMNKYRKAQQQIEDAE 317
K + + + +R LEE ++ +T A + + A E E
Sbjct: 1168 KKREAEFQKMRRDLEEATLQHEATAAALRKKHADSTAELGE 1208
Score = 34.3 bits (77), Expect = 0.13
Identities = 20/98 (20%), Positives = 46/98 (46%)
Frame = +3
Query: 36 KLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQL 215
+L++ + +L ++ E+ + R E Q E++ + + ++RM+ +L + Q
Sbjct: 1226 ELKMEIDDLASNMESVSKAKANLEKMCRTLEDQLSEIKTKEEQNQRMINDLNTQRARLQT 1285
Query: 216 KMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRAD 329
+ Y RQ EE + + + + QQIE+ + +
Sbjct: 1286 ETGEYSRQAEEKDALISQLSRGKQGFTQQIEELKRHLE 1323
Score = 29.6 bits (65), Expect = 3.2
Identities = 14/72 (19%), Positives = 36/72 (50%)
Frame = +3
Query: 39 LQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLK 218
LQ++++ + RC + + + E + KE+ ++A+D+ + EL K + +
Sbjct: 890 LQLQVQAEADSLADAEERCDQLIKTKIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDE 949
Query: 219 MRAYKRQLEEIE 254
K+ ++++E
Sbjct: 950 CSELKKDIDDLE 961
>sp|P12847|MYH3_RAT Myosin heavy chain, fast skeletal muscle, embryonic
Length = 1940
Score = 120 bits (302), Expect = 1e-27
Identities = 58/119 (48%), Positives = 88/119 (73%)
Frame = +3
Query: 6 ATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVE 185
A + GK+ IQKL+ R+RELE + E EQ+R E++ RK+ER+ KEL Q+++DR+ V+
Sbjct: 1805 ALKGGKKQIQKLETRIRELEFELEGEQKRNTESVKGLRKYERRVKELTYQSEEDRKNVLR 1864
Query: 186 LQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRA 362
LQDL+DK Q+K+++YKRQ EE ++ + V + K+RKAQ ++E+AE RAD+AE + RA
Sbjct: 1865 LQDLVDKLQVKVKSYKRQAEEADEQANVHLTKFRKAQHELEEAEERADIAESQVNKLRA 1923
Score = 41.2 bits (95), Expect = 0.001
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Frame = +3
Query: 21 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 200
++ I++LQ R+ ELE + EAE+ + Q + R+ +EL ++ ++ + +L
Sbjct: 1106 QKKIKELQARIEELEEEIEAERATRAKTEKQRSDYARELEELSERLEEAGGVTSTQIELN 1165
Query: 201 DKTQLKMRAYKRQLEE--IEDVSTVAMNKYRKAQQQIEDAE 317
K + + +R LEE ++ +TVA + + A E AE
Sbjct: 1166 KKREAEFLKLRRDLEEATLQHEATVATLRKKHADSAAELAE 1206
Score = 34.7 bits (78), Expect = 0.098
Identities = 25/117 (21%), Positives = 59/117 (50%), Gaps = 16/117 (13%)
Frame = +3
Query: 33 QKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQ 212
Q+L RL++ + ++ Q + ++ + + +++ KELQ + ++ + + KT+
Sbjct: 1075 QQLDERLKKKDFEYSQLQSKVEDEQTLSLQLQKKIKELQARIEELEEEIEAERATRAKTE 1134
Query: 213 LKMRAYKRQLEEIED---------VSTVAMNKYRKAQ-----QQIEDA--EHRADMA 335
+ Y R+LEE+ + + + +NK R+A+ + +E+A +H A +A
Sbjct: 1135 KQRSDYARELEELSERLEEAGGVTSTQIELNKKREAEFLKLRRDLEEATLQHEATVA 1191
Score = 32.3 bits (72), Expect = 0.49
Identities = 27/110 (24%), Positives = 55/110 (50%)
Frame = +3
Query: 36 KLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQL 215
+LQV+ E E +AE+R C + + + E + KE+ ++A+D+ + EL K +
Sbjct: 889 QLQVQA-ESENLLDAEER-CDQLIKAKFQLEAKIKEVTERAEDEEEINAELTAKKRKLED 946
Query: 216 KMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAG 365
+ K+ ++++E T+A ++E +H + ++LT AG
Sbjct: 947 ECSELKKDIDDLE--LTLA---------KVEKEKHATENKVKNLTEELAG 985
Score = 31.2 bits (69), Expect = 1.1
Identities = 20/98 (20%), Positives = 43/98 (43%)
Frame = +3
Query: 36 KLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQL 215
+ ++ + +L + E+ + R E Q E + + ++ +R + EL + Q
Sbjct: 1224 EFKLEIDDLSSSVESVSKSKANLEKICRTLEDQLSEARGKNEETQRSLSELTTQKSRLQT 1283
Query: 216 KMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRAD 329
+ RQLEE E + + + QQIE+ + + +
Sbjct: 1284 EAGELSRQLEEKESIVSQLSRSKQAFTQQIEELKRQLE 1321
Score = 30.0 bits (66), Expect = 2.4
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +3
Query: 21 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 200
++ + L+ +L E E QR E Q + + + EL +Q ++ +V +L
Sbjct: 1247 EKICRTLEDQLSEARGKNEETQRSLSELTTQKSRLQTEAGELSRQLEEKESIVSQLSRSK 1306
Query: 201 DKTQLKMRAYKRQLEE 248
++ KRQLEE
Sbjct: 1307 QAFTQQIEELKRQLEE 1322
>sp|Q90339|MYSS_CYPCA Myosin heavy chain, fast skeletal muscle
Length = 1935
Score = 120 bits (302), Expect = 1e-27
Identities = 58/121 (47%), Positives = 87/121 (71%)
Frame = +3
Query: 6 ATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVE 185
A + GK+ +QKL+ R+RELE + EAEQRR +A+ RK+ER+ KEL Q ++D++ V+
Sbjct: 1805 AMKGGKKQLQKLESRVRELEAEVEAEQRRGADAVKGVRKYERRVKELTYQTEEDKKNVIR 1864
Query: 186 LQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAG 365
LQDL+DK QLK++ YKRQ EE E+ + +++YRK Q ++E+A+ RAD+AE + RA
Sbjct: 1865 LQDLVDKLQLKVKVYKRQAEEAEEQTNTHLSRYRKVQHELEEAQERADVAESQVNKLRAK 1924
Query: 366 S 368
S
Sbjct: 1925 S 1925
Score = 36.6 bits (83), Expect = 0.026
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +3
Query: 21 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 200
++ I++LQ R+ ELE + EAE+ + Q R+ +E+ ++ ++ ++
Sbjct: 1106 QKKIKELQARIEELEEEIEAERAARAKVEKQRADLSRELEEISERLEEAGGATAAQIEMN 1165
Query: 201 DKTQLKMRAYKRQLEE--IEDVSTVAMNKYRKAQQQIEDAE 317
K + + + +R LEE ++ +T A + +A E E
Sbjct: 1166 KKREAEFQKMRRDLEESTLQHEATAAALRKEQADSVAELGE 1206
Score = 32.3 bits (72), Expect = 0.49
Identities = 20/96 (20%), Positives = 45/96 (46%)
Frame = +3
Query: 42 QVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKM 221
++ + +L ++ EA + R E Q E++ ++D++ R + ++ + Q +
Sbjct: 1226 KMEIDDLTSNMEAVAKAKANLEKMCRTLEDQLSEIKTKSDENVRQLNDMNAQRARLQTEN 1285
Query: 222 RAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRAD 329
+ RQLEE E + + + QQIE+ + +
Sbjct: 1286 GEFSRQLEEKEALVSQLTRGKQAYTQQIEELKRHIE 1321
Score = 30.4 bits (67), Expect = 1.9
Identities = 21/103 (20%), Positives = 41/103 (39%)
Frame = +3
Query: 24 RAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLD 203
+A L+ R LE + + E + Q Q LQ + + R + E + L+
Sbjct: 1241 KAKANLEKMCRTLEDQLSEIKTKSDENVRQLNDMNAQRARLQTENGEFSRQLEEKEALVS 1300
Query: 204 KTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADM 332
+ +AY +Q+EE++ + ++ A H D+
Sbjct: 1301 QLTRGKQAYTQQIEELKRHIEEEVKAKNALAHAVQSARHDCDL 1343
Score = 28.5 bits (62), Expect = 7.1
Identities = 23/101 (22%), Positives = 42/101 (41%)
Frame = +3
Query: 15 EGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQD 194
E + ++ Q R L T+ + +EAL +R+ K LQQ+ D L +
Sbjct: 1463 ESQAELEGAQKEARSLSTELFKMKNSYEEALDHLETLKRENKNLQQEISD-------LTE 1515
Query: 195 LLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAE 317
L +T + + E+E ++ + Q +E+AE
Sbjct: 1516 QLGET-------GKSIHELEKAKKTVESEKSEIQTALEEAE 1549
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,367,596
Number of Sequences: 369166
Number of extensions: 549056
Number of successful extensions: 3687
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2890
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3605
length of database: 68,354,980
effective HSP length: 100
effective length of database: 49,881,480
effective search space used: 2394311040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)