Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_024_K05
(335 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP... 157 9e-39
sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cy... 153 1e-37
sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cy... 152 2e-37
sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cy... 152 3e-37
sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cy... 150 1e-36
sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cy... 149 3e-36
sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cyto... 147 1e-35
sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mi... 147 1e-35
sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mi... 146 2e-35
sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP... 145 3e-35
>sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 647
Score = 157 bits (396), Expect = 9e-39
Identities = 72/111 (64%), Positives = 86/111 (77%)
Frame = +1
Query: 1 AP*TSDSPSPNAMKCIRRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKN 180
AP TS +P AM + +NTIFTNVA TSDGG +WEG+E + N++I DW GKPWTK+
Sbjct: 362 APGTSMETNPIAMNTVFKNTIFTNVASTSDGGVFWEGMESSL-APNVQITDWLGKPWTKD 420
Query: 181 CGRVAAHPNSRFCCPASQCPIIDINWESPNGVPISAVIFGGRRPEGVPLVY 333
G+ AAHPNSRFC PA+QCPIID WE P GVPISA++FGGRRP GVPL+Y
Sbjct: 421 SGKPAAHPNSRFCTPAAQCPIIDEAWEDPAGVPISAMLFGGRRPAGVPLIY 471
>sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 153 bits (386), Expect = 1e-37
Identities = 71/111 (63%), Positives = 84/111 (75%)
Frame = +1
Query: 1 AP*TSDSPSPNAMKCIRRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKN 180
AP TS +PNA+K I++NTIFTNVAETSDGG YWEG++ + +++I W+GK W
Sbjct: 336 APGTSVRTNPNAIKTIQKNTIFTNVAETSDGGVYWEGIDQPLAA-RVKLISWKGKEWDPK 394
Query: 181 CGRVAAHPNSRFCCPASQCPIIDINWESPNGVPISAVIFGGRRPEGVPLVY 333
G AHPNSRFC PASQCPIID +WESP GVPI +IFGGRRP GVPLVY
Sbjct: 395 DGEPCAHPNSRFCTPASQCPIIDPDWESPEGVPIEGIIFGGRRPVGVPLVY 445
>sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 152 bits (384), Expect = 2e-37
Identities = 72/111 (64%), Positives = 81/111 (72%)
Frame = +1
Query: 1 AP*TSDSPSPNAMKCIRRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKN 180
AP TS +PNA+K I++NTIFTNVAETSDGG YWEG+ DE + I W+ K W+
Sbjct: 336 APGTSVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGI-DEPLASGVTITSWKNKEWSSE 394
Query: 181 CGRVAAHPNSRFCCPASQCPIIDINWESPNGVPISAVIFGGRRPEGVPLVY 333
G AHPNSRFC PASQCPIID WESP GVPI +IFGGRRP GVPLVY
Sbjct: 395 DGEPCAHPNSRFCTPASQCPIIDAAWESPEGVPIEGIIFGGRRPAGVPLVY 445
>sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 152 bits (383), Expect = 3e-37
Identities = 72/111 (64%), Positives = 81/111 (72%)
Frame = +1
Query: 1 AP*TSDSPSPNAMKCIRRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKN 180
AP TS +PNA+K I++NTIFTNVAETSDGG YWEG+ DE + I W+ K W+
Sbjct: 336 APGTSVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGI-DEPLASGVTITSWKNKEWSPE 394
Query: 181 CGRVAAHPNSRFCCPASQCPIIDINWESPNGVPISAVIFGGRRPEGVPLVY 333
G AHPNSRFC PASQCPIID WESP GVPI +IFGGRRP GVPLVY
Sbjct: 395 DGEPCAHPNSRFCTPASQCPIIDAAWESPEGVPIEGIIFGGRRPAGVPLVY 445
>sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 150 bits (378), Expect = 1e-36
Identities = 72/111 (64%), Positives = 80/111 (72%)
Frame = +1
Query: 1 AP*TSDSPSPNAMKCIRRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKN 180
AP TS +PNA+K I++NTIFTNVAETSDGG YWEG+ DE + I W+ K W
Sbjct: 336 APGTSVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGI-DEPLAPGVTITSWKNKEWRPQ 394
Query: 181 CGRVAAHPNSRFCCPASQCPIIDINWESPNGVPISAVIFGGRRPEGVPLVY 333
AHPNSRFC PASQCPIID WESP GVPI +IFGGRRPEGVPLVY
Sbjct: 395 DAEPCAHPNSRFCTPASQCPIIDPAWESPEGVPIEGIIFGGRRPEGVPLVY 445
>sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 149 bits (375), Expect = 3e-36
Identities = 69/111 (62%), Positives = 82/111 (73%)
Frame = +1
Query: 1 AP*TSDSPSPNAMKCIRRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKN 180
AP TS +PNA+K I +NTIFTNVAETSDGG YWEG+++ + + + W+ K WT +
Sbjct: 336 APGTSIKTNPNAIKTIFKNTIFTNVAETSDGGVYWEGIDEPLP-PGVTLTSWKNKDWTPD 394
Query: 181 CGRVAAHPNSRFCCPASQCPIIDINWESPNGVPISAVIFGGRRPEGVPLVY 333
G AHPNSRFC PASQCPI+D WESP GVPI +IFGGRRP GVPLVY
Sbjct: 395 NGEPCAHPNSRFCTPASQCPIMDPAWESPEGVPIEGIIFGGRRPAGVPLVY 445
>sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 147 bits (370), Expect = 1e-35
Identities = 71/111 (63%), Positives = 79/111 (71%)
Frame = +1
Query: 1 AP*TSDSPSPNAMKCIRRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKN 180
AP TS +PNA+K I++NTIFTNVAETSDGG YWEG+ DE + I W+ K W
Sbjct: 336 APGTSVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGI-DEPLAPGVTITSWKNKEWRPQ 394
Query: 181 CGRVAAHPNSRFCCPASQCPIIDINWESPNGVPISAVIFGGRRPEGVPLVY 333
AHPNSRFC PASQCPIID WESP GVPI +IFGGRRP GVPLVY
Sbjct: 395 DEEPCAHPNSRFCTPASQCPIIDPAWESPEGVPIEGIIFGGRRPAGVPLVY 445
>sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 147 bits (370), Expect = 1e-35
Identities = 68/111 (61%), Positives = 80/111 (72%)
Frame = +1
Query: 1 AP*TSDSPSPNAMKCIRRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKN 180
AP TS + +PNAM I+ NTIFTNVAETSDGG YWEG++ + + + W GKPW
Sbjct: 354 APGTSATTNPNAMATIQSNTIFTNVAETSDGGVYWEGIDQPLP-PGVTVTSWLGKPWKPG 412
Query: 181 CGRVAAHPNSRFCCPASQCPIIDINWESPNGVPISAVIFGGRRPEGVPLVY 333
AHPNSRFC PA QCPI+D WE+P GVPI A+IFGGRRP+GVPLVY
Sbjct: 413 DKEPCAHPNSRFCAPARQCPIMDPAWEAPEGVPIDAIIFGGRRPKGVPLVY 463
>sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 146 bits (368), Expect = 2e-35
Identities = 68/111 (61%), Positives = 80/111 (72%)
Frame = +1
Query: 1 AP*TSDSPSPNAMKCIRRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKN 180
AP TS + +PNAM I+ NT+FTNVAETSDGG YWEG++ + + I W GKPW
Sbjct: 354 APGTSAATNPNAMATIQSNTLFTNVAETSDGGVYWEGIDQPLP-PGVTITSWLGKPWKPG 412
Query: 181 CGRVAAHPNSRFCCPASQCPIIDINWESPNGVPISAVIFGGRRPEGVPLVY 333
AHPNSRFC PA QCPI+D WE+P GVPI A+IFGGRRP+GVPLVY
Sbjct: 413 DKEPCAHPNSRFCVPARQCPIMDPAWEAPEGVPIDAIIFGGRRPKGVPLVY 463
>sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 643
Score = 145 bits (366), Expect = 3e-35
Identities = 68/111 (61%), Positives = 80/111 (72%)
Frame = +1
Query: 1 AP*TSDSPSPNAMKCIRRNTIFTNVAETSDGGYYWEGLEDEVDLDNLEIIDWQGKPWTKN 180
AP TS +P AM + NTIFTNVAET+DG Y+WEGLE EV +++I+W G+PW
Sbjct: 354 APGTSHKTNPMAMASFQENTIFTNVAETADGEYFWEGLEHEVKNPKVDMINWLGEPWHIG 413
Query: 181 CGRVAAHPNSRFCCPASQCPIIDINWESPNGVPISAVIFGGRRPEGVPLVY 333
AAHPNSRF PA QCPII +WE P GVPI A+IFGGRRPEGVPLV+
Sbjct: 414 DESKAAHPNSRFTAPAGQCPIIHPDWEKPEGVPIDAIIFGGRRPEGVPLVF 464
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,852,707
Number of Sequences: 369166
Number of extensions: 772249
Number of successful extensions: 2217
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2159
length of database: 68,354,980
effective HSP length: 79
effective length of database: 53,760,915
effective search space used: 1720349280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)