Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_024_H24
(808 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q11179|YPC2_CAEEL Putative serine/threonine-protein kina... 41 0.004
sp|P27636|CDC15_YEAST Cell division control protein 15 40 0.006
sp|P28582|CDPK_DAUCA Calcium-dependent protein kinase (CDPK) 39 0.013
sp|Q8WXR4|MYO3B_HUMAN Myosin IIIB 39 0.013
sp|P41892|CDC7_SCHPO Cell division control protein 7 39 0.022
sp|Q8ICR0|CDPK2_PLAF7 Calcium-dependent protein kinase 2 (P... 38 0.037
sp|O15865|CDPK2_PLAFK Calcium-dependent protein kinase 2 (P... 38 0.037
sp|P51958|CDC2_CARAU Cell division control protein 2 homolo... 38 0.037
sp|P24033|CDC22_XENLA Cell division control protein 2 homol... 37 0.064
sp|P35567|CDC21_XENLA Cell division control protein 2 homol... 37 0.064
>sp|Q11179|YPC2_CAEEL Putative serine/threonine-protein kinase C05D10.2 in chromosome III
Length = 470
Score = 40.8 bits (94), Expect = 0.004
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Frame = +2
Query: 563 TPDFDDYIKHEE------LGHGPFGSVYRCSKFGSKDMVVLKK----YKNPNDKDEELKK 712
T D D +I HE+ LG G +G V++ S++ V LKK ++NP D ++
Sbjct: 2 TDDVDTHI-HEKFDLQKRLGKGAYGIVWKAYDKRSRETVALKKIFDAFRNPTDSQRTFRE 60
Query: 713 LMVEFSIYEKLGDHPRILKCNGFFRS 790
+M ++ G HP ++K FR+
Sbjct: 61 VM----FLQEFGKHPNVIKLYNIFRA 82
>sp|P27636|CDC15_YEAST Cell division control protein 15
Length = 974
Score = 40.4 bits (93), Expect = 0.006
Identities = 25/76 (32%), Positives = 39/76 (51%)
Frame = +2
Query: 581 YIKHEELGHGPFGSVYRCSKFGSKDMVVLKKYKNPNDKDEELKKLMVEFSIYEKLGDHPR 760
Y + +G G +G VY+ + +V +K+ N DEEL +M E S+ + L +H
Sbjct: 25 YHLKQVIGRGSYGVVYKAINKHTDQVVAIKEVVYEN--DEELNDIMAEISLLKNL-NHNN 81
Query: 761 ILKCNGFFRSVKASYI 808
I+K +GF R YI
Sbjct: 82 IVKYHGFIRKSYELYI 97
>sp|P28582|CDPK_DAUCA Calcium-dependent protein kinase (CDPK)
Length = 532
Score = 39.3 bits (90), Expect = 0.013
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Frame = +2
Query: 581 YIKHEELGHGPFGSVYRCSKFGSKDM-----VVLKKYKNPNDKDEELKKLMVEFSIYEKL 745
Y +ELG G FG VY+C++ S + ++ +K + NDK E++K+ E I + L
Sbjct: 81 YTLGKELGRGQFGCVYQCTENSSGQLYACKSILKRKLVSKNDK-EDIKR---EIQILQHL 136
Query: 746 GDHPRILKCNGFFRSVKASYI 808
P I++ G F ++ ++
Sbjct: 137 SGQPNIVEFKGVFEDRQSVHL 157
>sp|Q8WXR4|MYO3B_HUMAN Myosin IIIB
Length = 1341
Score = 39.3 bits (90), Expect = 0.013
Identities = 24/81 (29%), Positives = 41/81 (50%)
Frame = +2
Query: 542 ISLFYLPTPDFDDYIKHEELGHGPFGSVYRCSKFGSKDMVVLKKYKNPNDKDEELKKLMV 721
+ L LP P D + E +G G +G VY+ + + +K +D DEE++
Sbjct: 15 LGLESLPDPT-DTWEIIETIGKGTYGKVYKVTNKRDGSLAAVKILDPVSDMDEEIE---A 70
Query: 722 EFSIYEKLGDHPRILKCNGFF 784
E++I + L +HP ++K G F
Sbjct: 71 EYNILQFLPNHPNVVKFYGMF 91
>sp|P41892|CDC7_SCHPO Cell division control protein 7
Length = 1062
Score = 38.5 bits (88), Expect = 0.022
Identities = 21/64 (32%), Positives = 34/64 (53%)
Frame = +2
Query: 599 LGHGPFGSVYRCSKFGSKDMVVLKKYKNPNDKDEELKKLMVEFSIYEKLGDHPRILKCNG 778
LG G FG+VYR + + V +KK K +L + +E + + L DHP I+K G
Sbjct: 15 LGKGAFGAVYRGLNIKNGETVAVKKVKLSKMLKSDLSVIKMEIDLLKNL-DHPNIVKYRG 73
Query: 779 FFRS 790
+++
Sbjct: 74 SYQT 77
>sp|Q8ICR0|CDPK2_PLAF7 Calcium-dependent protein kinase 2 (PfCDPK2)
Length = 509
Score = 37.7 bits (86), Expect = 0.037
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2
Query: 575 DDYIKHEELGHGPFGSVYRCSKFGSKDMVVLKKYKNPNDKDEELKKLMVEFSIYEKLGDH 754
D YI E+LG G +G VY+ + + +K+ K D+ + + + E I +KL DH
Sbjct: 70 DKYIIDEKLGQGTYGCVYKGIDKVTNQLYAIKEEK--KDRLKNINRFFQEIEIMKKL-DH 126
Query: 755 PRILK 769
P I+K
Sbjct: 127 PNIVK 131
>sp|O15865|CDPK2_PLAFK Calcium-dependent protein kinase 2 (PfCDPK2)
Length = 513
Score = 37.7 bits (86), Expect = 0.037
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = +2
Query: 575 DDYIKHEELGHGPFGSVYRCSKFGSKDMVVLKKYKNPNDKDEELKKLMVEFSIYEKLGDH 754
D YI E+LG G +G VY+ + + +K+ K D+ + + + E I +KL DH
Sbjct: 70 DKYIIDEKLGQGTYGCVYKGIDKVTNQLYAIKEEK--KDRLKNINRFFQEIEIMKKL-DH 126
Query: 755 PRILK 769
P I+K
Sbjct: 127 PNIVK 131
>sp|P51958|CDC2_CARAU Cell division control protein 2 homolog (p34 protein kinase)
(Cyclin-dependent kinase 1) (CDK1)
Length = 302
Score = 37.7 bits (86), Expect = 0.037
Identities = 18/65 (27%), Positives = 38/65 (58%)
Frame = +2
Query: 575 DDYIKHEELGHGPFGSVYRCSKFGSKDMVVLKKYKNPNDKDEELKKLMVEFSIYEKLGDH 754
DDY+K E++G G +G VY+ + +V +KK + ++++ + E S+ ++L H
Sbjct: 2 DDYLKIEKIGEGTYGVVYKGRNKTTGQVVAMKKIRLESEEEGVPSTAVREISLLKEL-QH 60
Query: 755 PRILK 769
P +++
Sbjct: 61 PNVVR 65
>sp|P24033|CDC22_XENLA Cell division control protein 2 homolog 2 (p34 protein kinase 2)
Length = 302
Score = 37.0 bits (84), Expect = 0.064
Identities = 19/64 (29%), Positives = 36/64 (56%)
Frame = +2
Query: 575 DDYIKHEELGHGPFGSVYRCSKFGSKDMVVLKKYKNPNDKDEELKKLMVEFSIYEKLGDH 754
D+Y K E++G G +G VY+ + +V +KK + N+++ + E S+ ++L H
Sbjct: 2 DEYTKIEKIGEGTYGVVYKGRHKATGQVVAMKKIRLENEEEGVPSTAIREISLLKEL-QH 60
Query: 755 PRIL 766
P I+
Sbjct: 61 PNIV 64
>sp|P35567|CDC21_XENLA Cell division control protein 2 homolog 1 (p34 protein kinase 1)
Length = 302
Score = 37.0 bits (84), Expect = 0.064
Identities = 19/64 (29%), Positives = 36/64 (56%)
Frame = +2
Query: 575 DDYIKHEELGHGPFGSVYRCSKFGSKDMVVLKKYKNPNDKDEELKKLMVEFSIYEKLGDH 754
D+Y K E++G G +G VY+ + +V +KK + N+++ + E S+ ++L H
Sbjct: 2 DEYTKIEKIGEGTYGVVYKGRHKATGQVVAMKKIRLENEEEGVPSTAIREISLLKEL-QH 60
Query: 755 PRIL 766
P I+
Sbjct: 61 PNIV 64
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,999,040
Number of Sequences: 369166
Number of extensions: 1480214
Number of successful extensions: 4729
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4723
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7666799535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)