Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_024_H20
(881 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cy... 419 e-117
sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cy... 418 e-117
sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cy... 416 e-116
sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cyto... 411 e-114
sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP... 410 e-114
sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cy... 410 e-114
sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cy... 407 e-113
sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mi... 393 e-109
sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mi... 393 e-109
sp|P29190|PPCK_HAECO Phosphoenolpyruvate carboxykinase [GTP... 367 e-101
>sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 419 bits (1078), Expect = e-117
Identities = 201/293 (68%), Positives = 235/293 (80%)
Frame = +2
Query: 2 KPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTDPADVARVESKTFISTKL 181
+PDHI +CDGSEEEN L+ + ++G ++ L KY+NCWL TDP DVAR+ESKT I T+
Sbjct: 39 QPDHIHICDGSEEENGRLLGQMEEEGILRRLKKYDNCWLALTDPRDVARIESKTVIVTQE 98
Query: 182 KRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPFSMGPIGGPLSKI 361
+R T+P Q LG WMSE D E A N RFPGCMKGRTMYVIPFSMGP+G PLSKI
Sbjct: 99 QRDTVPIPKTGLSQ--LGRWMSEEDFEKAFNARFPGCMKGRTMYVIPFSMGPLGSPLSKI 156
Query: 362 GIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPCNPE 541
GIELTDSPYVV SM+IMTRMG VLE++ D FVK LHSVG PLP ++ ++N WPCNPE
Sbjct: 157 GIELTDSPYVVASMRIMTRMGTPVLEALGDGE-FVKCLHSVGCPLPLQKPLVNNWPCNPE 215
Query: 542 KTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNG 721
TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AEHMLILG+T P G
Sbjct: 216 LTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASRLAKEEGWLAEHMLILGITNPEG 275
Query: 722 EKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINP 880
EK Y+ AAFPSACGKTNLAM+ P++PG+KVECVGDDIAWMKFD++G LRAINP
Sbjct: 276 EKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMKFDAQGHLRAINP 328
>sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 418 bits (1075), Expect = e-117
Identities = 201/293 (68%), Positives = 235/293 (80%)
Frame = +2
Query: 2 KPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTDPADVARVESKTFISTKL 181
+PDHI +CDGSEEEN L+ + ++G ++ L KY+NCWL TDP DVAR+ SKT I T+
Sbjct: 39 QPDHIHICDGSEEENGRLLGQMEEEGILRRLKKYDNCWLALTDPRDVARIGSKTVIVTQE 98
Query: 182 KRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPFSMGPIGGPLSKI 361
+R T+P Q LG WMSE D E ALN RFPGCMKGRTMYVIPFSMGP+G PLSKI
Sbjct: 99 QRDTVPIPKTGLSQ--LGRWMSEEDFEKALNARFPGCMKGRTMYVIPFSMGPLGSPLSKI 156
Query: 362 GIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPCNPE 541
GIELTDSPYVV SM+IMTRMG VLE++ D FVK LHSVG PLP ++ ++N WPCNPE
Sbjct: 157 GIELTDSPYVVASMRIMTRMGTPVLEALGDGE-FVKCLHSVGCPLPLQKPLVNNWPCNPE 215
Query: 542 KTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNG 721
TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AEHMLILG+T P G
Sbjct: 216 LTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASRLAKEEGWLAEHMLILGITNPEG 275
Query: 722 EKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINP 880
EK Y+ AAFPSACGKTNLAM+ P++PG+KVECVGDDIAWMKFD++G LRAINP
Sbjct: 276 EKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMKFDAQGHLRAINP 328
>sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 416 bits (1070), Expect = e-116
Identities = 199/293 (67%), Positives = 234/293 (79%)
Frame = +2
Query: 2 KPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTDPADVARVESKTFISTKL 181
+PD + +CDGSEEEN+ L+ + ++G +K L KY+NCWL TDP DVAR+ESKT I T+
Sbjct: 39 RPDQVHICDGSEEENRQLLSHMEEEGVIKRLKKYDNCWLALTDPRDVARIESKTVIITRE 98
Query: 182 KRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPFSMGPIGGPLSKI 361
+R T+P + Q LG WMSE D E A N RFPGCMKGRTMYVIPFSMGP+G PLSKI
Sbjct: 99 QRDTVPIPKNGLSQ--LGRWMSEEDFEKAFNIRFPGCMKGRTMYVIPFSMGPLGSPLSKI 156
Query: 362 GIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPCNPE 541
GIELTDSPYVV SM+IMTRMG VLE++ D FVK LHSVG PLP ++ ++N W CNPE
Sbjct: 157 GIELTDSPYVVTSMRIMTRMGTSVLEALGDGE-FVKCLHSVGCPLPLKKPLVNNWACNPE 215
Query: 542 KTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNG 721
TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AEHMLILG+T P G
Sbjct: 216 LTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRMASRLAKEEGWLAEHMLILGITNPKG 275
Query: 722 EKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINP 880
+K Y AAFPSACGKTNLAM+ PT+PG+KVECVGDDIAWMKFD +G+LRAINP
Sbjct: 276 QKKYFAAAFPSACGKTNLAMMNPTLPGWKVECVGDDIAWMKFDQQGNLRAINP 328
>sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 411 bits (1056), Expect = e-114
Identities = 195/293 (66%), Positives = 235/293 (80%)
Frame = +2
Query: 2 KPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTDPADVARVESKTFISTKL 181
+P++I +CDGSEEE L+ + ++G ++ L KY+NCWL TDP DVAR+ESKT I T+
Sbjct: 39 QPEYIHICDGSEEEYGRLLAHMQEEGVIRKLKKYDNCWLALTDPRDVARIESKTVIITQE 98
Query: 182 KRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPFSMGPIGGPLSKI 361
+R T+P Q +LG WMSE D E A N RFPGCMKGRTMYVIPFSMGP+G PL+KI
Sbjct: 99 QRDTVPIPKSG--QSQLGRWMSEEDFEKAFNARFPGCMKGRTMYVIPFSMGPLGSPLAKI 156
Query: 362 GIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPCNPE 541
GIELTDSPYVV SM+IMTRMG VLE++ D F+K LHSVG PLP ++ ++N W CNPE
Sbjct: 157 GIELTDSPYVVASMRIMTRMGTSVLEALGDGE-FIKCLHSVGCPLPLKKPLVNNWACNPE 215
Query: 542 KTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNG 721
TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AEHMLILG+T P G
Sbjct: 216 LTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRLAKEEGWLAEHMLILGITNPEG 275
Query: 722 EKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINP 880
+K Y+ AAFPSACGKTNLAM+ PT+PG+KVECVGDDIAWMKFD++G+LRAINP
Sbjct: 276 KKKYLAAAFPSACGKTNLAMMNPTLPGWKVECVGDDIAWMKFDAQGNLRAINP 328
>sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 647
Score = 410 bits (1054), Expect = e-114
Identities = 196/293 (66%), Positives = 236/293 (80%)
Frame = +2
Query: 2 KPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTDPADVARVESKTFISTKL 181
+PD + +CDGSE+ENK+LI+ L++ G++ L KY+NCWL RT+PADVARVES+TFI T+
Sbjct: 64 QPDQVHICDGSEQENKVLIKSLLEAGTIVPLPKYDNCWLARTNPADVARVESRTFICTER 123
Query: 182 KRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPFSMGPIGGPLSKI 361
+ TIP T ++G LGNW+S SDM+AA+ RFPGCMKGRTMYV+PFSMGP+G PLSKI
Sbjct: 124 REETIP-TPVEGVKGTLGNWISPSDMDAAVQQRFPGCMKGRTMYVVPFSMGPVGSPLSKI 182
Query: 362 GIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPCNPE 541
GIELTDS YVV SM+IMTRMG VL + FV+ALHSVG P + + WPC+PE
Sbjct: 183 GIELTDSAYVVASMRIMTRMGAAVLRQLAKKEEFVRALHSVGAPANGQVEQPS-WPCDPE 241
Query: 542 KTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNG 721
+T+I H PA+N I S+GSGYGGNSLLGKKCFALR+GS +A+ E W AEHMLILG+T P G
Sbjct: 242 RTIILHKPAENLIVSYGSGYGGNSLLGKKCFALRIGSTIAKQEGWLAEHMLILGITDPKG 301
Query: 722 EKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINP 880
EK YITAAFPSACGKTNLAM+ P++ YKVECVGDDIAWMKFDS+G LRAINP
Sbjct: 302 EKKYITAAFPSACGKTNLAMLNPSLANYKVECVGDDIAWMKFDSQGVLRAINP 354
>sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 410 bits (1053), Expect = e-114
Identities = 197/293 (67%), Positives = 233/293 (79%)
Frame = +2
Query: 2 KPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTDPADVARVESKTFISTKL 181
+P+ I +CDGSEEENK +++ +V+QG +K L+KYENCWL T+P DVAR+ESKT I T+
Sbjct: 39 QPESIHICDGSEEENKKILDIMVEQGMIKKLSKYENCWLALTNPRDVARIESKTVIITQE 98
Query: 182 KRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPFSMGPIGGPLSKI 361
+R TIP Q LG WMSE D E A N RFPGCM+GRTMYVIPFSMGPIG PL+KI
Sbjct: 99 QRDTIPIPKTGSSQ--LGRWMSEEDFEKAFNTRFPGCMQGRTMYVIPFSMGPIGSPLAKI 156
Query: 362 GIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPCNPE 541
GIELTDSPYVV SM++MTRMG L+++ + FVK LHSVG PLP + +IN WPCNPE
Sbjct: 157 GIELTDSPYVVASMRMMTRMGTAALKALGNGE-FVKCLHSVGCPLPLKEPLINNWPCNPE 215
Query: 542 KTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNG 721
TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S +A++E W AEHMLILG+T P G
Sbjct: 216 LTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRIAKEEGWLAEHMLILGITNPEG 275
Query: 722 EKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINP 880
EK Y AAFPSACGKTNLAM+ P+ PG+K+ECVGDDIAWMKFD G+LRAINP
Sbjct: 276 EKKYFAAAFPSACGKTNLAMMNPSRPGWKIECVGDDIAWMKFDELGNLRAINP 328
>sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 407 bits (1045), Expect = e-113
Identities = 194/293 (66%), Positives = 234/293 (79%)
Frame = +2
Query: 2 KPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTDPADVARVESKTFISTKL 181
+P++I +CDGSEEE L+ + ++G ++ L KY+NCWL TDP DVAR+ESKT I T+
Sbjct: 39 QPEYIHICDGSEEEYGQLLAHMQEEGVIRKLKKYDNCWLALTDPRDVARIESKTVIITQE 98
Query: 182 KRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPFSMGPIGGPLSKI 361
+R T+P Q LG WMSE D E A N RFPGCMKGRTMYVIPFSMGP+G PL+KI
Sbjct: 99 QRDTVPIPKTGLSQ--LGRWMSEEDFEKAFNARFPGCMKGRTMYVIPFSMGPLGSPLAKI 156
Query: 362 GIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPCNPE 541
GIELTDSPYVV SM+IMTRMG VLE++ D F+K LHSVG PLP ++ ++N W CNPE
Sbjct: 157 GIELTDSPYVVASMRIMTRMGISVLEALGDGE-FIKCLHSVGCPLPLKKPLVNNWACNPE 215
Query: 542 KTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNG 721
TLIAH+P + EI SFGSGYGGNSLLGKKCFALR+ S LA++E W AEHMLILG+T P G
Sbjct: 216 LTLIAHLPDRREIISFGSGYGGNSLLGKKCFALRIASRLAKEEGWLAEHMLILGITNPEG 275
Query: 722 EKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINP 880
+K Y+ AAFPSACGKTNLAM+ P++PG+KVECVGDDIAWMKFD++G+LRAINP
Sbjct: 276 KKKYLAAAFPSACGKTNLAMMNPSLPGWKVECVGDDIAWMKFDAQGNLRAINP 328
>sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 393 bits (1010), Expect = e-109
Identities = 188/293 (64%), Positives = 229/293 (78%)
Frame = +2
Query: 2 KPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTDPADVARVESKTFISTKL 181
+P+ I +CDG+E EN + L +QG ++ L KY NCWL RTDP DVARVESKT I T
Sbjct: 56 QPEGIHICDGTEAENTATLTLLEQQGLIRKLPKYNNCWLARTDPKDVARVESKTVIVTPS 115
Query: 182 KRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPFSMGPIGGPLSKI 361
+R T+P +G+LGNWMS +D + A+++RFPGCM+GRTMYV+PFSMGP+G PLS+I
Sbjct: 116 QRDTVP-LPPGGARGQLGNWMSPADFQRAVDERFPGCMQGRTMYVLPFSMGPVGSPLSRI 174
Query: 362 GIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPCNPE 541
G++LTDS YVV SM+IMTR+G VL+++ D FVK LHSVG PL + ++ WPCNPE
Sbjct: 175 GVQLTDSAYVVASMRIMTRLGTPVLQALGDGD-FVKCLHSVGQPLTGQGEPVSQWPCNPE 233
Query: 542 KTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNG 721
KTLI H+P + EI SFGSGYGGNSLLGKKCFALR+ S LARDE W AEHMLILG+T P G
Sbjct: 234 KTLIGHVPDQREIISFGSGYGGNSLLGKKCFALRIASRLARDEGWLAEHMLILGITSPAG 293
Query: 722 EKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINP 880
+K AAFPSACGKTNLAM+ P +PG+KVECVGDDIAWM+FDS+G LRAINP
Sbjct: 294 KKALCAAAFPSACGKTNLAMMRPALPGWKVECVGDDIAWMRFDSEGRLRAINP 346
>sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 393 bits (1009), Expect = e-109
Identities = 186/293 (63%), Positives = 230/293 (78%)
Frame = +2
Query: 2 KPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTDPADVARVESKTFISTKL 181
+P+ I +CDG+E EN ++ L +QG ++ L KY+NCWL RTDP DVARVESKT I T
Sbjct: 56 QPEGIHICDGTEAENTAILALLEEQGLIRKLPKYKNCWLARTDPKDVARVESKTVIVTPS 115
Query: 182 KRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPFSMGPIGGPLSKI 361
+R T+P + +G+LGNWMS + + A+++RFPGCM+GR MYV+PFSMGP+G PLS+I
Sbjct: 116 QRDTVPLLAGGA-RGQLGNWMSPDEFQRAVDERFPGCMQGRIMYVLPFSMGPVGSPLSRI 174
Query: 362 GIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPCNPE 541
G++LTDS YVV SM+IMTR+G VL+++ D F+K LHSVG PL + WPCNPE
Sbjct: 175 GVQLTDSAYVVASMRIMTRLGTPVLQALGDGD-FIKCLHSVGQPLTGHGDPVGQWPCNPE 233
Query: 542 KTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNG 721
KTLI H+P + EI SFGSGYGGNSLLGKKCFALR+ S LARDE W AEHMLILG+T P G
Sbjct: 234 KTLIGHVPDQREIVSFGSGYGGNSLLGKKCFALRIASRLARDEGWLAEHMLILGITNPAG 293
Query: 722 EKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINP 880
+K Y+ AAFPSACGKTNLAM+ P +PG+KVECVGDDIAWM+FDS+G LRAINP
Sbjct: 294 KKRYVAAAFPSACGKTNLAMMRPALPGWKVECVGDDIAWMRFDSEGQLRAINP 346
>sp|P29190|PPCK_HAECO Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 619
Score = 367 bits (941), Expect = e-101
Identities = 176/293 (60%), Positives = 225/293 (76%)
Frame = +2
Query: 2 KPDHIKVCDGSEEENKILIEDLVKQGSMKSLTKYENCWLVRTDPADVARVESKTFISTKL 181
+P I +CDGS+ E +I+ L+++G + L YEN ++ RTDP DVARVESKT++ T
Sbjct: 33 RPRGIYICDGSQHEADEIIDKLIERGMLSPLKAYENNYICRTDPKDVARVESKTWMVTPD 92
Query: 182 KRTTIPETSDPKIQGKLGNWMSESDMEAALNDRFPGCMKGRTMYVIPFSMGPIGGPLSKI 361
K T+ T D I+ +G+WMS + L+ RFPGCM GR MYVIPFSMGP+GGPLSKI
Sbjct: 93 KYQTVCHTPDG-IEPIMGHWMSPDSLATELDSRFPGCMAGRIMYVIPFSMGPVGGPLSKI 151
Query: 362 GIELTDSPYVVCSMKIMTRMGHKVLESMTDSTPFVKALHSVGVPLPTERHIINGWPCNPE 541
G++LTDS YVV SM+IMTR+GH+V +++ D+ FV+ +HSVG+P P ++ +IN WPCNPE
Sbjct: 152 GVQLTDSNYVVLSMRIMTRVGHEVWDALGDND-FVRCIHSVGLPRPVKQRVINHWPCNPE 210
Query: 542 KTLIAHIPAKNEICSFGSGYGGNSLLGKKCFALRLGSILARDEKWFAEHMLILGLTPPNG 721
+ LIAH PA+ EI SFGSGYGGNSLLGKK ALR+ S +A+DE W AEHMLI+G+T P+G
Sbjct: 211 RVLIAHRPAEREIWSFGSGYGGNSLLGKKMLALRIASNIAKDEGWMAEHMLIMGVTRPDG 270
Query: 722 EKIYITAAFPSACGKTNLAMIEPTIPGYKVECVGDDIAWMKFDSKGSLRAINP 880
++ +I AAFPSACGKTNLAM+EP +PG+KV CVGDDIAWMKF G L AINP
Sbjct: 271 KEHFIAAAFPSACGKTNLAMLEPALPGWKVRCVGDDIAWMKFGEDGRLYAINP 323
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,559,699
Number of Sequences: 369166
Number of extensions: 2424077
Number of successful extensions: 6296
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6151
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8790245790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)