Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_024_G04
(819 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 260 4e-69
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 256 7e-68
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 247 2e-65
sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted pr... 246 7e-65
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 245 1e-64
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 245 1e-64
sp|P13277|CYSP1_HOMAM Digestive cysteine proteinase 1 precu... 242 8e-64
sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted ... 241 1e-63
sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precu... 239 5e-63
sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (C... 234 2e-61
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 260 bits (664), Expect = 4e-69
Identities = 130/271 (47%), Positives = 172/271 (63%), Gaps = 8/271 (2%)
Frame = +3
Query: 30 RREIWEDNLKYIEKHNYEYFVGLHSFTLGANEFSDLSHEEFKSIYLMKEFIPPKTENIYX 209
RR +WE N+K IE HN EY G HSFT+ N F D++ EEF+ + + P+ ++
Sbjct: 48 RRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQ 107
Query: 210 XXXXXXXXXXXVNWQKQGYVTPVKDQTRTCGSCWAFSTTGSLEGQFYRKYKRLVSLSEQQ 389
V+W+++GYVTPVK+Q + CGSCWAFS TG+LEGQ +RK RL+SLSEQ
Sbjct: 108 EPLFYEAPRS-VDWREKGYVTPVKNQGQ-CGSCWAFSATGALEGQMFRKTGRLISLSEQN 165
Query: 390 LVDCD--MKSYGCYGGWVEDAVDYITQTGGIESEDDYPYLAKASLCKFNKSKIVARTAGY 563
LVDC + GC GG ++ A Y+ GG++SE+ YPY A CK+N VA G+
Sbjct: 166 LVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSVANDTGF 225
Query: 564 TTIEKNEIALAEALVNVGPISIIIDASHRSFQLYKDGIYDEPQC-TEKVDHAVLLVGYG- 737
I K E AL +A+ VGPIS+ IDA H SF YK+GIY EP C +E +DH VL+VGYG
Sbjct: 226 VDIPKQEKALMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDCSSEDMDHGVLVVGYGF 285
Query: 738 ----EEKSKYWIVKNSWGRKWGKNGYIWMSK 818
+ +KYW+VKNSWG +WG GY+ M+K
Sbjct: 286 ESTESDNNKYWLVKNSWGEEWGMGGYVKMAK 316
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 256 bits (653), Expect = 7e-68
Identities = 131/275 (47%), Positives = 175/275 (63%), Gaps = 12/275 (4%)
Frame = +3
Query: 30 RREIWEDNLKYIEKHNYEYFVGLHSFTLGANEFSDLSHEEFKSI---YLMKEFIPPKTEN 200
RR +WE N+K IE HN EY G H FT+ N F D+++EEF+ + + ++F K
Sbjct: 48 RRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQMMGCFRNQKFRKGKV-- 105
Query: 201 IYXXXXXXXXXXXXVNWQKQGYVTPVKDQTRTCGSCWAFSTTGSLEGQFYRKYKRLVSLS 380
V+W+K+GYVTPVK+Q + CGSCWAFS TG+LEGQ +RK +LVSLS
Sbjct: 106 --FREPLFLDLPKSVDWRKKGYVTPVKNQ-KQCGSCWAFSATGALEGQMFRKTGKLVSLS 162
Query: 381 EQQLVDCD--MKSYGCYGGWVEDAVDYITQTGGIESEDDYPYLAKASLCKFNKSKIVART 554
EQ LVDC + GC GG++ A Y+ + GG++SE+ YPY+A +CK+ VA
Sbjct: 163 EQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEICKYRPENSVAND 222
Query: 555 AGYTTIEK-NEIALAEALVNVGPISIIIDASHRSFQLYKDGIYDEPQCTEK-VDHAVLLV 728
G+T + E AL +A+ VGPIS+ +DA H SFQ YK GIY EP C+ K +DH VL+V
Sbjct: 223 TGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDCSSKNLDHGVLVV 282
Query: 729 GYGEE-----KSKYWIVKNSWGRKWGKNGYIWMSK 818
GYG E SKYW+VKNSWG +WG NGY+ ++K
Sbjct: 283 GYGFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAK 317
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 247 bits (631), Expect = 2e-65
Identities = 126/272 (46%), Positives = 172/272 (63%), Gaps = 9/272 (3%)
Frame = +3
Query: 30 RREIWEDNLKYIEKHNYEYFVGLHSFTLGANEFSDLSHEEFKSIYLMKEFIPPK-TENIY 206
RR +WE N+K IE HN EY G H FT+ N F D+++EEF+ + M F K +
Sbjct: 48 RRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFGDMTNEEFRQV--MNGFQNQKHKKGKM 105
Query: 207 XXXXXXXXXXXXVNWQKQGYVTPVKDQTRTCGSCWAFSTTGSLEGQFYRKYKRLVSLSEQ 386
V+W+++GYVTPVK+Q + CGSCWAFS TG+LEGQ +RK +LVSLSEQ
Sbjct: 106 FQEPLFAEIPKSVDWREKGYVTPVKNQGQ-CGSCWAFSATGALEGQMFRKTGKLVSLSEQ 164
Query: 387 QLVDCD--MKSYGCYGGWVEDAVDYITQTGGIESEDDYPYLAK-ASLCKFNKSKIVARTA 557
LVDC + GC GG +++A Y+ GG++SE+ YPYL + C + A
Sbjct: 165 NLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSEESYPYLGRDTETCNYKPECSAANDT 224
Query: 558 GYTTIEKNEIALAEALVNVGPISIIIDASHRSFQLYKDGIYDEPQCTEK-VDHAVLLVGY 734
G+ + + E AL +A+ +GPIS+ IDA H+SFQ YK GIY +P C+ K +DH VL+VGY
Sbjct: 225 GFVDLPQREKALMKAVATLGPISVAIDAGHQSFQFYKSGIYFDPDCSSKDLDHGVLVVGY 284
Query: 735 G----EEKSKYWIVKNSWGRKWGKNGYIWMSK 818
G + +K+WIVKNSWG +WG NGY+ M+K
Sbjct: 285 GFEGTDSNNKFWIVKNSWGPEWGWNGYVKMAK 316
>sp|P07154|CATL_RAT Cathepsin L precursor (Major excreted protein) (MEP) (Cyclic
protein 2) (CP-2) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 246 bits (627), Expect = 7e-65
Identities = 126/271 (46%), Positives = 170/271 (62%), Gaps = 8/271 (2%)
Frame = +3
Query: 30 RREIWEDNLKYIEKHNYEYFVGLHSFTLGANEFSDLSHEEFKSIYLMKEFIPPKTENIYX 209
RR +WE N++ I+ HN EY G H FT+ N F D+++EEF+ I K ++
Sbjct: 48 RRAVWEKNMRMIQLHNGEYSNGKHGFTMEMNAFGDMTNEEFRQIVNGYRHQKHKKGRLFQ 107
Query: 210 XXXXXXXXXXXVNWQKQGYVTPVKDQTRTCGSCWAFSTTGSLEGQFYRKYKRLVSLSEQQ 389
V+W+++G VTPVK+Q + CGSCWAFS +G LEGQ + K +L+SLSEQ
Sbjct: 108 EPLMLQIPKT-VDWREKGCVTPVKNQGQ-CGSCWAFSASGCLEGQMFLKTGKLISLSEQN 165
Query: 390 LVDC--DMKSYGCYGGWVEDAVDYITQTGGIESEDDYPYLAKASLCKFNKSKIVARTAGY 563
LVDC D + GC GG ++ A YI + GG++SE+ YPY AK CK+ VA G+
Sbjct: 166 LVDCSHDQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEYAVANDTGF 225
Query: 564 TTIEKNEIALAEALVNVGPISIIIDASHRSFQLYKDGIYDEPQCTEK-VDHAVLLVGYGE 740
I + E AL +A+ VGPIS+ +DASH S Q Y GIY EP C+ K +DH VL+VGYG
Sbjct: 226 VDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKDLDHGVLVVGYGY 285
Query: 741 E-----KSKYWIVKNSWGRKWGKNGYIWMSK 818
E K KYW+VKNSWG++WG +GYI ++K
Sbjct: 286 EGTDSNKDKYWLVKNSWGKEWGMDGYIKIAK 316
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 245 bits (625), Expect = 1e-64
Identities = 125/272 (45%), Positives = 171/272 (62%), Gaps = 9/272 (3%)
Frame = +3
Query: 30 RREIWEDNLKYIEKHNYEYFVGLHSFTLGANEFSDLSHEEFKSIYLMKEFIPPKTENIYX 209
RR +WE N+K IE HN EY G H F++ N F D+++EEF+ + + K ++
Sbjct: 48 RRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKVFH 107
Query: 210 XXXXXXXXXXXVNWQKQGYVTPVKDQTRTCGSCWAFSTTGSLEGQFYRKYKRLVSLSEQQ 389
V+W+++GYVT VK+Q + CGSCWAFS TG+LEGQ +RK +LVSLSEQ
Sbjct: 108 ESLVLEVPKS-VDWREKGYVTAVKNQGQ-CGSCWAFSATGALEGQMFRKTGKLVSLSEQN 165
Query: 390 LVDCD--MKSYGCYGGWVEDAVDYITQTGGIESEDDYPYLAK-ASLCKFNKSKIVARTAG 560
LVDC + GC GG +++A Y+ GG+++E+ YPYL + + C + A G
Sbjct: 166 LVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDTEESYPYLGRETNSCTYKPECSAANDTG 225
Query: 561 YTTIEKNEIALAEALVNVGPISIIIDASHRSFQLYKDGIYDEPQCTEK-VDHAVLLVGYG 737
+ I + E AL +A+ VGPIS+ IDA H SFQ YK GIY +P C+ K +DH VL+VGYG
Sbjct: 226 FVDIPQREKALMKAVATVGPISVAIDAGHSSFQFYKSGIYYDPDCSSKDLDHGVLVVGYG 285
Query: 738 EE-----KSKYWIVKNSWGRKWGKNGYIWMSK 818
E SK+WIVKNSWG +WG NGY+ M+K
Sbjct: 286 FEGTDSNSSKFWIVKNSWGPEWGWNGYVKMAK 317
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 245 bits (625), Expect = 1e-64
Identities = 128/272 (47%), Positives = 170/272 (62%), Gaps = 9/272 (3%)
Frame = +3
Query: 30 RREIWEDNLKYIEKHNYEYFVGLHSFTLGANEFSDLSHEEFKSIYLMKEFIPPKTENIYX 209
RR +WE N K I+ HN EY G H+F + N F D+++EEF+ + + K ++
Sbjct: 48 RRAVWEKNKKIIDLHNQEYSEGKHAFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFH 107
Query: 210 XXXXXXXXXXXVNWQKQGYVTPVKDQTRTCGSCWAFSTTGSLEGQFYRKYKRLVSLSEQQ 389
V+W K+GYVTPVK+Q + CGSCWAFS TG+LEGQ +RK +LVSLSEQ
Sbjct: 108 EPLLVDVPKS-VDWTKKGYVTPVKNQGQ-CGSCWAFSATGALEGQMFRKTGKLVSLSEQN 165
Query: 390 LVDCD--MKSYGCYGGWVEDAVDYITQTGGIESEDDYPYLA-KASLCKFNKSKIVARTAG 560
LVDC + GC GG +++A YI GG++SE+ YPYLA + C + A G
Sbjct: 166 LVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDSEESYPYLATDTNSCNYKPECSAANDTG 225
Query: 561 YTTIEKNEIALAEALVNVGPISIIIDASHRSFQLYKDGIYDEPQCTEK-VDHAVLLVGYG 737
+ I + E AL +A+ VGPIS+ IDA H SFQ YK GIY +P C+ K +DH VL+VGYG
Sbjct: 226 FVDIPQREKALMKAVATVGPISVAIDAGHTSFQFYKSGIYYDPDCSCKDLDHGVLVVGYG 285
Query: 738 EE-----KSKYWIVKNSWGRKWGKNGYIWMSK 818
E +K+WIVKNSWG +WG NGY+ M+K
Sbjct: 286 FEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAK 317
>sp|P13277|CYSP1_HOMAM Digestive cysteine proteinase 1 precursor
Length = 322
Score = 242 bits (618), Expect = 8e-64
Identities = 128/269 (47%), Positives = 174/269 (64%), Gaps = 6/269 (2%)
Frame = +3
Query: 30 RREIWEDNLKYIEKHNYEYFVGLHSFTLGANEFSDLSHEEFKSIYLMKEFIPPKTENIYX 209
R ++ DNL+YIE+ N +Y G ++ L N+FSD+++E+F ++ MK +
Sbjct: 40 RLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKFNAV--MKGYKKGPRPAAVF 97
Query: 210 XXXXXXXXXXXVNWQKQGYVTPVKDQTRTCGSCWAFSTTGSLEGQFYRKYKRLVSLSEQQ 389
V+W+ +G VTPVKDQ + CGSCWAFSTTG +EGQ + K RLVSLSEQQ
Sbjct: 98 TSTDAAPESTEVDWRTKGAVTPVKDQGQ-CGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQ 156
Query: 390 LVDCDMKSY---GCYGGWVEDAVDYITQTGGIESEDDYPYLAKASLCKFNKSKIVARTAG 560
LVDC SY GC GGWVE A+ Y+ GG+++E YPY A+ + C+FN + I A G
Sbjct: 157 LVDCAGGSYYNQGCNGGWVERAIMYVRDNGGVDTESSYPYEARDNTCRFNSNTIGATCTG 216
Query: 561 YTTI-EKNEIALAEALVNVGPISIIIDASHRSFQLYKDGIYDEPQC-TEKVDHAVLLVGY 734
Y I + +E AL A ++GPIS+ IDASHRSFQ Y G+Y EP C + ++DHAVL VGY
Sbjct: 217 YVGIAQGSESALKTATRDIGPISVAIDASHRSFQSYYTGVYYEPSCSSSQLDHAVLAVGY 276
Query: 735 GEEKSK-YWIVKNSWGRKWGKNGYIWMSK 818
G E + +W+VKNSW WG++GYI M++
Sbjct: 277 GSEGGQDFWLVKNSWATSWGESGYIKMAR 305
>sp|P06797|CATL_MOUSE Cathepsin L precursor (Major excreted protein) (MEP) (p39 cysteine
proteinase) [Contains: Cathepsin L heavy chain;
Cathepsin L light chain]
Length = 334
Score = 241 bits (616), Expect = 1e-63
Identities = 125/271 (46%), Positives = 168/271 (61%), Gaps = 8/271 (2%)
Frame = +3
Query: 30 RREIWEDNLKYIEKHNYEYFVGLHSFTLGANEFSDLSHEEFKSIYLMKEFIPPKTENIYX 209
RR IWE N++ I+ HN EY G H F++ N F D+++EEF+ + K ++
Sbjct: 48 RRAIWEKNMRMIQLHNGEYSNGQHGFSMEMNAFGDMTNEEFRQVVNGYRHQKHKKGRLFQ 107
Query: 210 XXXXXXXXXXXVNWQKQGYVTPVKDQTRTCGSCWAFSTTGSLEGQFYRKYKRLVSLSEQQ 389
V+W+++G VTPVK+Q + CGSCWAFS +G LEGQ + K +L+SLSEQ
Sbjct: 108 EPLMLKIPKS-VDWREKGCVTPVKNQGQ-CGSCWAFSASGCLEGQMFLKTGKLISLSEQN 165
Query: 390 LVDCD--MKSYGCYGGWVEDAVDYITQTGGIESEDDYPYLAKASLCKFNKSKIVARTAGY 563
LVDC + GC GG ++ A YI + GG++SE+ YPY AK CK+ VA G+
Sbjct: 166 LVDCSHAQGNQGCNGGLMDFAFQYIKENGGLDSEESYPYEAKDGSCKYRAEFAVANDTGF 225
Query: 564 TTIEKNEIALAEALVNVGPISIIIDASHRSFQLYKDGIYDEPQCTEK-VDHAVLLVGYGE 740
I + E AL +A+ VGPIS+ +DASH S Q Y GIY EP C+ K +DH VLLVGYG
Sbjct: 226 VDIPQQEKALMKAVATVGPISVAMDASHPSLQFYSSGIYYEPNCSSKNLDHGVLLVGYGY 285
Query: 741 E-----KSKYWIVKNSWGRKWGKNGYIWMSK 818
E K+KYW+VKNSWG +WG GYI ++K
Sbjct: 286 EGTDSNKNKYWLVKNSWGSEWGMEGYIKIAK 316
>sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precursor
Length = 323
Score = 239 bits (611), Expect = 5e-63
Identities = 127/270 (47%), Positives = 172/270 (63%), Gaps = 7/270 (2%)
Frame = +3
Query: 30 RREIWEDNLKYIEKHNYEYFVGLHSFTLGANEFSDLSHEEFKSIYLMKEFIPPKTE--NI 203
RR I+E N KYIE+ N +Y G +F L N+F D++ EEF ++ MK IP ++ ++
Sbjct: 40 RRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEEFNAV--MKGNIPRRSAPVSV 97
Query: 204 YXXXXXXXXXXXXVNWQKQGYVTPVKDQTRTCGSCWAFSTTGSLEGQFYRKYKRLVSLSE 383
+ V+W+ +G VTPVKDQ + CGSCWAFSTTGSLEGQ + K L+SL+E
Sbjct: 98 FYPKKETGPQATEVDWRTKGAVTPVKDQGQ-CGSCWAFSTTGSLEGQHFLKTGSLISLAE 156
Query: 384 QQLVDCDMK--SYGCYGGWVEDAVDYITQTGGIESEDDYPYLAKASLCKFNKSKIVARTA 557
QQLVDC GC GGW+ DA DYI GI++E YPY A+ C+F+ + + A +
Sbjct: 157 QQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYEARDGSCRFDSNSVAATCS 216
Query: 558 GYTTIEK-NEIALAEALVNVGPISIIIDASHRSFQLYKDGIYDEPQCTEK-VDHAVLLVG 731
G+T I +E L +A+ ++GPIS+ IDA+H SFQ Y G+Y EP C+ +DHAVL VG
Sbjct: 217 GHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVYYEPSCSPSYLDHAVLAVG 276
Query: 732 YGEEKSK-YWIVKNSWGRKWGKNGYIWMSK 818
YG E + +W+VKNSW WG GYI MS+
Sbjct: 277 YGSEGGQDFWLVKNSWATSWGDAGYIKMSR 306
>sp|P43235|CATK_HUMAN Cathepsin K precursor (Cathepsin O) (Cathepsin X) (Cathepsin O2)
Length = 329
Score = 234 bits (598), Expect = 2e-61
Identities = 122/277 (44%), Positives = 171/277 (61%), Gaps = 5/277 (1%)
Frame = +3
Query: 3 YRNPFHEIERREIWEDNLKYIEKHNYEYFVGLHSFTLGANEFSDLSHEEF--KSIYLMKE 176
Y N EI RR IWE NLKYI HN E +G+H++ L N D++ EE K L
Sbjct: 37 YNNKVDEISRRLIWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTSEEVVQKMTGLKVP 96
Query: 177 FIPPKTENIYXXXXXXXXXXXXVNWQKQGYVTPVKDQTRTCGSCWAFSTTGSLEGQFYRK 356
++ + V+++K+GYVTPVK+Q + CGSCWAFS+ G+LEGQ +K
Sbjct: 97 LSHSRSNDTLYIPEWEGRAPDSVDYRKKGYVTPVKNQGQ-CGSCWAFSSVGALEGQLKKK 155
Query: 357 YKRLVSLSEQQLVDCDMKSYGCYGGWVEDAVDYITQTGGIESEDDYPYLAKASLCKFNKS 536
+L++LS Q LVDC ++ GC GG++ +A Y+ + GI+SED YPY+ + C +N +
Sbjct: 156 TGKLLNLSPQNLVDCVSENDGCGGGYMTNAFQYVQKNRGIDSEDAYPYVGQEESCMYNPT 215
Query: 537 KIVARTAGYTTI-EKNEIALAEALVNVGPISIIIDASHRSFQLYKDGIYDEPQC-TEKVD 710
A+ GY I E NE AL A+ VGP+S+ IDAS SFQ Y G+Y + C ++ ++
Sbjct: 216 GKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYSKGVYYDESCNSDNLN 275
Query: 711 HAVLLVGYGEEK-SKYWIVKNSWGRKWGKNGYIWMSK 818
HAVL VGYG +K +K+WI+KNSWG WG GYI M++
Sbjct: 276 HAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMAR 312
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,598,951
Number of Sequences: 369166
Number of extensions: 1752481
Number of successful extensions: 5032
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4338
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7859674995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)