Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_024_D21
(758 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P17343|GBB1_CAEEL Guanine nucleotide-binding protein bet... 402 e-112
sp|P23232|GBB_LOLFO Guanine nucleotide-binding protein beta... 400 e-111
sp|O45040|GBB1_HOMAM Guanine nucleotide-binding protein G(I... 398 e-111
sp|Q08706|GBB_LYMST Guanine nucleotide-binding protein beta... 393 e-109
sp|P26308|GBB1_DROME Guanine nucleotide-binding protein bet... 393 e-109
sp|P79959|GBB1_XENLA Guanine nucleotide-binding protein G(I... 391 e-109
sp|Q9HAV0|GBB4_HUMAN Guanine nucleotide-binding protein bet... 390 e-108
sp|P54311|GBB1_RAT Guanine nucleotide-binding protein G(I)/... 388 e-107
sp|Q6PH57|GBB1_BRARE Guanine nucleotide-binding protein G(I... 388 e-107
sp|Q5R5W8|GBB1_PONPY Guanine nucleotide-binding protein G(I... 386 e-107
>sp|P17343|GBB1_CAEEL Guanine nucleotide-binding protein beta subunit 1
sp|Q61ZF6|GBB1_CAEBR Guanine nucleotide-binding protein beta subunit 1
Length = 340
Score = 402 bits (1033), Expect = e-112
Identities = 182/208 (87%), Positives = 197/208 (94%)
Frame = +2
Query: 2 VRVSRELPGHTGYLSCCRFIDDNQIVTSSGDVTCGLWDIETGQQVATFTGHTGDVMSLSL 181
VRVSRELPGHTGYLSCCRF+DDNQIVTSSGD+TC LWDIETGQQ FTGHTGDVMSLSL
Sbjct: 133 VRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSL 192
Query: 182 APDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRL 361
+PD RTF+SGACDASAKLWD+RDG CKQTFPGHESDINA+ FFP+G AFATGSDDATCRL
Sbjct: 193 SPDFRTFISGACDASAKLWDIRDGMCKQTFPGHESDINAVAFFPSGNAFATGSDDATCRL 252
Query: 362 FDIRADQEIGMFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHD 541
FDIRADQE+ M+SHDNIICGITSVAFSKSGRLL GYDDFNCNVWD+++Q+RAGVLAGHD
Sbjct: 253 FDIRADQELAMYSHDNIICGITSVAFSKSGRLLFAGYDDFNCNVWDSMRQERAGVLAGHD 312
Query: 542 NRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
NRVSCLGV+EDGMAVCTGSWDSFL+IWN
Sbjct: 313 NRVSCLGVTEDGMAVCTGSWDSFLKIWN 340
Score = 52.4 bits (124), Expect = 1e-06
Identities = 35/163 (21%), Positives = 60/163 (36%), Gaps = 1/163 (0%)
Frame = +2
Query: 140 TFTGHTGDVMSLSLAPDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNG 319
T GH + ++ A D R VS + D +WD P S + + P+G
Sbjct: 50 TLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 320 QAFATGSDDATCRLFDIRADQEIGMFSHD-NIICGITSVAFSKSGRLLLGGYDDFNCNVW 496
A G D C ++ ++ + S + G S ++ D C +W
Sbjct: 110 SFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFLDDNQIVTSSGDMTCALW 169
Query: 497 DTLKQDRAGVLAGHDNRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
D + GH V L +S D +G+ D+ ++W+
Sbjct: 170 DIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKLWD 212
>sp|P23232|GBB_LOLFO Guanine nucleotide-binding protein beta subunit
Length = 341
Score = 400 bits (1029), Expect = e-111
Identities = 188/208 (90%), Positives = 199/208 (95%)
Frame = +2
Query: 2 VRVSRELPGHTGYLSCCRFIDDNQIVTSSGDVTCGLWDIETGQQVATFTGHTGDVMSLSL 181
VRVSRELPGHTGYLSCCRFIDDNQIVTSSGD+TC LW+IETG Q+ +F GHTGDVMSLSL
Sbjct: 134 VRVSRELPGHTGYLSCCRFIDDNQIVTSSGDMTCALWNIETGNQITSFGGHTGDVMSLSL 193
Query: 182 APDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRL 361
APDMRTFVSGACDASAKL+D+RDG CKQTF GHESDINAIT+FPNG AFATGSDDATCRL
Sbjct: 194 APDMRTFVSGACDASAKLFDIRDGICKQTFTGHESDINAITYFPNGFAFATGSDDATCRL 253
Query: 362 FDIRADQEIGMFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHD 541
FDIRADQEIGM+SHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWD LKQ+RAGVLAGHD
Sbjct: 254 FDIRADQEIGMYSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDVLKQERAGVLAGHD 313
Query: 542 NRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
NRVSCLGV+EDGMAV TGSWDSFL+IWN
Sbjct: 314 NRVSCLGVTEDGMAVATGSWDSFLKIWN 341
Score = 43.5 bits (101), Expect = 6e-04
Identities = 32/163 (19%), Positives = 61/163 (37%), Gaps = 1/163 (0%)
Frame = +2
Query: 140 TFTGHTGDVMSLSLAPDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNG 319
T GH + ++ A D R VS + D +WD P S + + P+G
Sbjct: 51 TLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDGYTTNKVHAIPLRSSWVMTCAYAPSG 110
Query: 320 QAFATGSDDATCRLFDIRADQEIGMFSHD-NIICGITSVAFSKSGRLLLGGYDDFNCNVW 496
A G D C ++ ++ + S + G S ++ D C +W
Sbjct: 111 NYVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFIDDNQIVTSSGDMTCALW 170
Query: 497 DTLKQDRAGVLAGHDNRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
+ ++ GH V L ++ D +G+ D+ ++++
Sbjct: 171 NIETGNQITSFGGHTGDVMSLSLAPDMRTFVSGACDASAKLFD 213
>sp|O45040|GBB1_HOMAM Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
Length = 340
Score = 398 bits (1023), Expect = e-111
Identities = 181/208 (87%), Positives = 197/208 (94%)
Frame = +2
Query: 2 VRVSRELPGHTGYLSCCRFIDDNQIVTSSGDVTCGLWDIETGQQVATFTGHTGDVMSLSL 181
VRVSRELPGHTGYLSCCRF+DDNQIVTSSGD+TC LWDIETGQQ FTGHTGDVMSLSL
Sbjct: 133 VRVSRELPGHTGYLSCCRFVDDNQIVTSSGDMTCALWDIETGQQCTQFTGHTGDVMSLSL 192
Query: 182 APDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRL 361
+P+MRTF SGACDASAKLWD+RDG C+QTFPGHESDINA+TFFPNG AFATGSDDATCRL
Sbjct: 193 SPNMRTFTSGACDASAKLWDIRDGMCRQTFPGHESDINAVTFFPNGHAFATGSDDATCRL 252
Query: 362 FDIRADQEIGMFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHD 541
FDIRADQE+ M+SHDNIICGITSVAFSKSG+LLL GYDDFNCNVWD+++ +RAGVLAGHD
Sbjct: 253 FDIRADQELAMYSHDNIICGITSVAFSKSGKLLLAGYDDFNCNVWDSMRTERAGVLAGHD 312
Query: 542 NRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
NRVSCLGV+EDGMAV TGSWDSFL+IWN
Sbjct: 313 NRVSCLGVTEDGMAVATGSWDSFLKIWN 340
Score = 48.1 bits (113), Expect = 3e-05
Identities = 33/163 (20%), Positives = 59/163 (36%), Gaps = 1/163 (0%)
Frame = +2
Query: 140 TFTGHTGDVMSLSLAPDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNG 319
T GH + ++ D R VS + D +WD P S + + P+G
Sbjct: 50 TLRGHLAKIYAMHWGSDSRNLVSASQDGKLIVWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 320 QAFATGSDDATCRLFDIRADQEIGMFSHD-NIICGITSVAFSKSGRLLLGGYDDFNCNVW 496
A G D C ++ ++ + S + G S ++ D C +W
Sbjct: 110 SYVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFVDDNQIVTSSGDMTCALW 169
Query: 497 DTLKQDRAGVLAGHDNRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
D + GH V L +S + +G+ D+ ++W+
Sbjct: 170 DIETGQQCTQFTGHTGDVMSLSLSPNMRTFTSGACDASAKLWD 212
>sp|Q08706|GBB_LYMST Guanine nucleotide-binding protein beta subunit
Length = 341
Score = 393 bits (1010), Expect = e-109
Identities = 183/208 (87%), Positives = 193/208 (92%)
Frame = +2
Query: 2 VRVSRELPGHTGYLSCCRFIDDNQIVTSSGDVTCGLWDIETGQQVATFTGHTGDVMSLSL 181
VRVSRELPGHTGYLSCCRFIDDN IVTSSGD++C LWDIETGQQ +FTGHTGDVMSLS
Sbjct: 134 VRVSRELPGHTGYLSCCRFIDDNSIVTSSGDMSCALWDIETGQQTTSFTGHTGDVMSLST 193
Query: 182 APDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRL 361
+PD RTFVSGACDASAKLWD+RDG CKQTF GHESDINAIT+FPNG AFATGSDDATCRL
Sbjct: 194 SPDFRTFVSGACDASAKLWDVRDGMCKQTFSGHESDINAITYFPNGHAFATGSDDATCRL 253
Query: 362 FDIRADQEIGMFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHD 541
FDIRADQEIGM+SHDNIICGITSVAFSKSGRLLLG YDDFNCNVWD LKQ+ GVLAGHD
Sbjct: 254 FDIRADQEIGMYSHDNIICGITSVAFSKSGRLLLGRYDDFNCNVWDVLKQETHGVLAGHD 313
Query: 542 NRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
NRVSCLGV+EDG AV TGSWDSFL+IWN
Sbjct: 314 NRVSCLGVTEDGSAVATGSWDSFLKIWN 341
Score = 50.4 bits (119), Expect = 5e-06
Identities = 35/163 (21%), Positives = 60/163 (36%), Gaps = 1/163 (0%)
Frame = +2
Query: 140 TFTGHTGDVMSLSLAPDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNG 319
T GH + ++ A D R VS + D +WD P S + + P+G
Sbjct: 51 TLRGHLAKIYAMHWASDSRNLVSASQDGKLIVWDGYTTNKVHAIPLRSSWVMTCAYAPSG 110
Query: 320 QAFATGSDDATCRLFDIRADQEIGMFSHD-NIICGITSVAFSKSGRLLLGGYDDFNCNVW 496
A G D C ++ ++ + S + G S ++ D +C +W
Sbjct: 111 NFVACGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRFIDDNSIVTSSGDMSCALW 170
Query: 497 DTLKQDRAGVLAGHDNRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
D + GH V L S D +G+ D+ ++W+
Sbjct: 171 DIETGQQTTSFTGHTGDVMSLSTSPDFRTFVSGACDASAKLWD 213
>sp|P26308|GBB1_DROME Guanine nucleotide-binding protein beta subunit 1
Length = 340
Score = 393 bits (1010), Expect = e-109
Identities = 179/208 (86%), Positives = 197/208 (94%)
Frame = +2
Query: 2 VRVSRELPGHTGYLSCCRFIDDNQIVTSSGDVTCGLWDIETGQQVATFTGHTGDVMSLSL 181
VRVSRELPGH GYLSCCRF+DDNQIVTSSGD++CGLWDIETG QV +F GHTGDVM+LSL
Sbjct: 133 VRVSRELPGHGGYLSCCRFLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSL 192
Query: 182 APDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRL 361
AP +TFVSGACDASAKLWD+R+G CKQTFPGHESDINA+TFFPNGQAFATGSDDATCRL
Sbjct: 193 APQCKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRL 252
Query: 362 FDIRADQEIGMFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHD 541
FDIRADQE+ M+SHDNIICGITSVAFSKSGRLLL GYDDFNCNVWDT+K +R+G+LAGHD
Sbjct: 253 FDIRADQELAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHD 312
Query: 542 NRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
NRVSCLGV+E+GMAV TGSWDSFLR+WN
Sbjct: 313 NRVSCLGVTENGMAVATGSWDSFLRVWN 340
Score = 47.0 bits (110), Expect = 6e-05
Identities = 32/164 (19%), Positives = 63/164 (38%), Gaps = 2/164 (1%)
Frame = +2
Query: 140 TFTGHTGDVMSLSLAPDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNG 319
T GH + ++ D R VS + D +WD P S + + P+G
Sbjct: 50 TLRGHLAKIYAMHWGNDSRNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 320 QAFATGSDDATCRLFDIRADQEIGMFSHDNIICG--ITSVAFSKSGRLLLGGYDDFNCNV 493
A G D C +++++ + S + G ++ F +++ D +C +
Sbjct: 110 SYVACGGLDNMCSIYNLKTREGNVRVSRELPGHGGYLSCCRFLDDNQIVTSS-GDMSCGL 168
Query: 494 WDTLKQDRAGVLAGHDNRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
WD + GH V L ++ +G+ D+ ++W+
Sbjct: 169 WDIETGLQVTSFLGHTGDVMALSLAPQCKTFVSGACDASAKLWD 212
>sp|P79959|GBB1_XENLA Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1) (XGbeta1)
Length = 340
Score = 391 bits (1005), Expect = e-109
Identities = 181/208 (87%), Positives = 193/208 (92%)
Frame = +2
Query: 2 VRVSRELPGHTGYLSCCRFIDDNQIVTSSGDVTCGLWDIETGQQVATFTGHTGDVMSLSL 181
VRVSREL GHTGYLSCCRF+DDNQI+TSSGD TC LWDIETGQQ TFTGHTGDVMSLSL
Sbjct: 133 VRVSRELAGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSL 192
Query: 182 APDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRL 361
APD R FVSGACDASAKLWD+R+G C+QTF GHESDINAI FFPNG AFATGSDDATCRL
Sbjct: 193 APDSRCFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRL 252
Query: 362 FDIRADQEIGMFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHD 541
FD+RADQE+ ++SHDNIICGITSVAFSKSGRLLL GYDDFNCNVWDTLK DRAGVLAGHD
Sbjct: 253 FDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHD 312
Query: 542 NRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
NRVSCLGV++DGMAV TGSWDSFL+IWN
Sbjct: 313 NRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 51.2 bits (121), Expect = 3e-06
Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 1/163 (0%)
Frame = +2
Query: 140 TFTGHTGDVMSLSLAPDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNG 319
T GH + ++ D R VS + D +WD P S + + P+G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 320 QAFATGSDDATCRLFDIRADQEIGMFSHDNI-ICGITSVAFSKSGRLLLGGYDDFNCNVW 496
A G D C +++++ + S + G S ++ D C +W
Sbjct: 110 NYVACGGLDNICPIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIITSSGDTTCALW 169
Query: 497 DTLKQDRAGVLAGHDNRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
D + GH V L ++ D +G+ D+ ++W+
Sbjct: 170 DIETGQQTTTFTGHTGDVMSLSLAPDSRCFVSGACDASAKLWD 212
>sp|Q9HAV0|GBB4_HUMAN Guanine nucleotide-binding protein beta subunit 4 (Transducin beta
chain 4)
Length = 340
Score = 390 bits (1001), Expect = e-108
Identities = 179/208 (86%), Positives = 195/208 (93%)
Frame = +2
Query: 2 VRVSRELPGHTGYLSCCRFIDDNQIVTSSGDVTCGLWDIETGQQVATFTGHTGDVMSLSL 181
VRVSRELPGHTGYLSCCRF+DD+QIVTSSGD TC LWDIET QQ TFTGH+GDVMSLSL
Sbjct: 133 VRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETAQQTTTFTGHSGDVMSLSL 192
Query: 182 APDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRL 361
+PDMRTFVSGACDAS+KLWD+RDG C+Q+F GH SDINA++FFPNG AFATGSDDATCRL
Sbjct: 193 SPDMRTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVSFFPNGYAFATGSDDATCRL 252
Query: 362 FDIRADQEIGMFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHD 541
FD+RADQE+ ++SHDNIICGITSVAFSKSGRLLL GYDDFNCNVWDTLK DRAGVLAGHD
Sbjct: 253 FDLRADQELLLYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKGDRAGVLAGHD 312
Query: 542 NRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
NRVSCLGV++DGMAV TGSWDSFLRIWN
Sbjct: 313 NRVSCLGVTDDGMAVATGSWDSFLRIWN 340
Score = 50.1 bits (118), Expect = 7e-06
Identities = 34/163 (20%), Positives = 60/163 (36%), Gaps = 1/163 (0%)
Frame = +2
Query: 140 TFTGHTGDVMSLSLAPDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNG 319
T GH + ++ D R VS + D +WD P S + + P+G
Sbjct: 50 TLRGHLAKIYAMHWGYDSRLLVSASQDGKLIIWDSYTTNKMHAIPLRSSWVMTCAYAPSG 109
Query: 320 QAFATGSDDATCRLFDIRADQEIGMFSHD-NIICGITSVAFSKSGRLLLGGYDDFNCNVW 496
A G D C +++++ + S + G S ++ D C +W
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALW 169
Query: 497 DTLKQDRAGVLAGHDNRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
D + GH V L +S D +G+ D+ ++W+
Sbjct: 170 DIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKLWD 212
>sp|P54311|GBB1_RAT Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
sp|P62874|GBB1_MOUSE Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
sp|P62873|GBB1_HUMAN Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
sp|P62872|GBB1_CANFA Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
sp|P62871|GBB1_BOVIN Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
Length = 340
Score = 388 bits (996), Expect = e-107
Identities = 180/208 (86%), Positives = 191/208 (91%)
Frame = +2
Query: 2 VRVSRELPGHTGYLSCCRFIDDNQIVTSSGDVTCGLWDIETGQQVATFTGHTGDVMSLSL 181
VRVSREL GHTGYLSCCRF+DDNQIVTSSGD TC LWDIETGQQ TFTGHTGDVMSLSL
Sbjct: 133 VRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSL 192
Query: 182 APDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRL 361
APD R FVSGACDASAKLWD+R+G C+QTF GHESDINAI FFPNG AFATGSDDATCRL
Sbjct: 193 APDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRL 252
Query: 362 FDIRADQEIGMFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHD 541
FD+RADQE+ +SHDNIICGITSV+FSKSGRLLL GYDDFNCNVWD LK DRAGVLAGHD
Sbjct: 253 FDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHD 312
Query: 542 NRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
NRVSCLGV++DGMAV TGSWDSFL+IWN
Sbjct: 313 NRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 50.1 bits (118), Expect = 7e-06
Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 1/163 (0%)
Frame = +2
Query: 140 TFTGHTGDVMSLSLAPDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNG 319
T GH + ++ D R VS + D +WD P S + + P+G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 320 QAFATGSDDATCRLFDIRADQEIGMFSHDNI-ICGITSVAFSKSGRLLLGGYDDFNCNVW 496
A G D C +++++ + S + G S ++ D C +W
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALW 169
Query: 497 DTLKQDRAGVLAGHDNRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
D + GH V L ++ D +G+ D+ ++W+
Sbjct: 170 DIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212
>sp|Q6PH57|GBB1_BRARE Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
Length = 340
Score = 388 bits (996), Expect = e-107
Identities = 180/208 (86%), Positives = 191/208 (91%)
Frame = +2
Query: 2 VRVSRELPGHTGYLSCCRFIDDNQIVTSSGDVTCGLWDIETGQQVATFTGHTGDVMSLSL 181
VRVSREL GHTGYLSCCRF+DDNQIVTSSGD TC LWDIETGQQ TF GHTGDVMSLSL
Sbjct: 133 VRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSL 192
Query: 182 APDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRL 361
APD R FVSGACDASAKLWD+R+G C+QTF GHESDINAI FFPNG AFATGSDDATCRL
Sbjct: 193 APDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRL 252
Query: 362 FDIRADQEIGMFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHD 541
FD+RADQE+ ++SHDNIICGITSVAFSKSGRLLL GYDDFNCNVWD LK DRAGVLAGHD
Sbjct: 253 FDLRADQELMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHD 312
Query: 542 NRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
NRVSCLGV++DGMAV TGSWDSFL+IWN
Sbjct: 313 NRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 51.6 bits (122), Expect = 2e-06
Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 1/163 (0%)
Frame = +2
Query: 140 TFTGHTGDVMSLSLAPDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNG 319
T GH + ++ D R VS + D +WD P S + + P+G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 320 QAFATGSDDATCRLFDIRADQEIGMFSHDNI-ICGITSVAFSKSGRLLLGGYDDFNCNVW 496
A G D C +++++ + S + G S ++ D C +W
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALW 169
Query: 497 DTLKQDRAGVLAGHDNRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
D + AGH V L ++ D +G+ D+ ++W+
Sbjct: 170 DIETGQQTTTFAGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212
>sp|Q5R5W8|GBB1_PONPY Guanine nucleotide-binding protein G(I)/G(S)/G(T) beta subunit 1
(Transducin beta chain 1)
Length = 340
Score = 386 bits (991), Expect = e-107
Identities = 179/208 (86%), Positives = 191/208 (91%)
Frame = +2
Query: 2 VRVSRELPGHTGYLSCCRFIDDNQIVTSSGDVTCGLWDIETGQQVATFTGHTGDVMSLSL 181
VRVSREL GHTGYLSCCRF+DDNQIVTSSGD TC LWDIETGQQ TFTGHTGDVMSLSL
Sbjct: 133 VRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSL 192
Query: 182 APDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNGQAFATGSDDATCRL 361
APD R FVSGACDASAKLWD+R+G C+QTF GHESDINAI FFPNG AFATGSDDATCRL
Sbjct: 193 APDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRL 252
Query: 362 FDIRADQEIGMFSHDNIICGITSVAFSKSGRLLLGGYDDFNCNVWDTLKQDRAGVLAGHD 541
FD+RADQE+ +SHDNIICGITSV+FSKSGRLLL GYDDFNCNVWD LK DRAGVLAGHD
Sbjct: 253 FDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHD 312
Query: 542 NRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
+RVSCLGV++DGMAV TGSWDSFL+IWN
Sbjct: 313 DRVSCLGVTDDGMAVATGSWDSFLKIWN 340
Score = 50.1 bits (118), Expect = 7e-06
Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 1/163 (0%)
Frame = +2
Query: 140 TFTGHTGDVMSLSLAPDMRTFVSGACDASAKLWDLRDGQCKQTFPGHESDINAITFFPNG 319
T GH + ++ D R VS + D +WD P S + + P+G
Sbjct: 50 TLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSG 109
Query: 320 QAFATGSDDATCRLFDIRADQEIGMFSHDNI-ICGITSVAFSKSGRLLLGGYDDFNCNVW 496
A G D C +++++ + S + G S ++ D C +W
Sbjct: 110 NYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALW 169
Query: 497 DTLKQDRAGVLAGHDNRVSCLGVSEDGMAVCTGSWDSFLRIWN 625
D + GH V L ++ D +G+ D+ ++W+
Sbjct: 170 DIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,475,497
Number of Sequences: 369166
Number of extensions: 2035703
Number of successful extensions: 9242
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7090
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6970118400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)