Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_024_D12
(185 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P22202|HSP74_YEAST Heat shock protein SSA4 115 2e-26
sp|P10591|HSP71_YEAST Heat shock protein SSA1 (Heat shock p... 115 3e-26
sp|P10592|HSP72_YEAST Heat shock protein SSA2 115 3e-26
sp|P09435|HSP73_YEAST Heat shock protein SSA3 115 4e-26
sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70) 115 4e-26
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 114 5e-26
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 114 5e-26
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 114 5e-26
sp|P08418|HSP70_SCHMA Heat shock 70 kDa homolog protein (HS... 114 5e-26
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 114 5e-26
>sp|P22202|HSP74_YEAST Heat shock protein SSA4
Length = 642
Score = 115 bits (289), Expect = 2e-26
Identities = 56/61 (91%), Positives = 60/61 (98%)
Frame = +2
Query: 2 ELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMV 181
EL+GIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGK NKITITNDKGRLSK+DI++MV
Sbjct: 458 ELSGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKSNKITITNDKGRLSKEDIDKMV 517
Query: 182 A 184
A
Sbjct: 518 A 518
>sp|P10591|HSP71_YEAST Heat shock protein SSA1 (Heat shock protein YG100)
Length = 642
Score = 115 bits (288), Expect = 3e-26
Identities = 55/61 (90%), Positives = 60/61 (98%)
Frame = +2
Query: 2 ELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMV 181
EL+GIPPAPRGVPQIEVTFD+D+NGILNVSAVEKGTGK NKITITNDKGRLSK+DIE+MV
Sbjct: 457 ELSGIPPAPRGVPQIEVTFDVDSNGILNVSAVEKGTGKSNKITITNDKGRLSKEDIEKMV 516
Query: 182 A 184
A
Sbjct: 517 A 517
>sp|P10592|HSP72_YEAST Heat shock protein SSA2
Length = 639
Score = 115 bits (288), Expect = 3e-26
Identities = 55/61 (90%), Positives = 60/61 (98%)
Frame = +2
Query: 2 ELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMV 181
EL+GIPPAPRGVPQIEVTFD+D+NGILNVSAVEKGTGK NKITITNDKGRLSK+DIE+MV
Sbjct: 457 ELSGIPPAPRGVPQIEVTFDVDSNGILNVSAVEKGTGKSNKITITNDKGRLSKEDIEKMV 516
Query: 182 A 184
A
Sbjct: 517 A 517
>sp|P09435|HSP73_YEAST Heat shock protein SSA3
Length = 649
Score = 115 bits (287), Expect = 4e-26
Identities = 55/61 (90%), Positives = 60/61 (98%)
Frame = +2
Query: 2 ELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMV 181
EL+GIPPAPRGVPQI+VTFDIDANGILNVSA+EKGTGK NKITITNDKGRLSKDDI+RMV
Sbjct: 458 ELSGIPPAPRGVPQIDVTFDIDANGILNVSALEKGTGKSNKITITNDKGRLSKDDIDRMV 517
Query: 182 A 184
+
Sbjct: 518 S 518
>sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70)
Length = 644
Score = 115 bits (287), Expect = 4e-26
Identities = 56/60 (93%), Positives = 59/60 (98%)
Frame = +2
Query: 2 ELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMV 181
EL+GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIERMV
Sbjct: 462 ELSGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMV 521
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 114 bits (286), Expect = 5e-26
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +2
Query: 2 ELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMV 181
EL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIERMV
Sbjct: 460 ELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMV 519
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 114 bits (286), Expect = 5e-26
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +2
Query: 2 ELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMV 181
EL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIERMV
Sbjct: 460 ELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMV 519
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 114 bits (286), Expect = 5e-26
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +2
Query: 2 ELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMV 181
EL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIERMV
Sbjct: 460 ELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMV 519
>sp|P08418|HSP70_SCHMA Heat shock 70 kDa homolog protein (HSP70) (Major surface antigen)
Length = 637
Score = 114 bits (286), Expect = 5e-26
Identities = 55/61 (90%), Positives = 60/61 (98%)
Frame = +2
Query: 2 ELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMV 181
EL+GIPPAPRG PQIEVTFDIDANGILNVSAV+KGTGK+NKITITNDKGRLSK++IERMV
Sbjct: 458 ELSGIPPAPRGTPQIEVTFDIDANGILNVSAVDKGTGKQNKITITNDKGRLSKEEIERMV 517
Query: 182 A 184
A
Sbjct: 518 A 518
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 114 bits (286), Expect = 5e-26
Identities = 56/60 (93%), Positives = 58/60 (96%)
Frame = +2
Query: 2 ELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMV 181
EL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIERMV
Sbjct: 460 ELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMV 519
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,588,252
Number of Sequences: 369166
Number of extensions: 237758
Number of successful extensions: 1389
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1370
length of database: 68,354,980
effective HSP length: 34
effective length of database: 62,073,990
effective search space used: 1675997730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)