Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_024_D10
(360 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A 189 2e-48
sp|P11503|HSP70_ONCVO Heat shock 70 kDa protein (HSP70) 188 3e-48
sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70) 187 5e-48
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 187 6e-48
sp|Q24789|HSP70_ECHGR Heat shock cognate 70 kDa protein (HS... 186 1e-47
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 184 5e-47
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 184 5e-47
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 184 5e-47
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 184 5e-47
sp|P08418|HSP70_SCHMA Heat shock 70 kDa homolog protein (HS... 183 9e-47
>sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A
Length = 640
Score = 189 bits (480), Expect = 2e-48
Identities = 97/117 (82%), Positives = 103/117 (88%)
Frame = +1
Query: 10 ILSGERSEAVQNLLLLDVAPLSLGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGV 189
ILSG++SEAVQ+LLLLDVAPLSLGIETAGGVMTALIKRN YSDNQPGV
Sbjct: 380 ILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGV 439
Query: 190 LIQVYEGERAMTRDNNLLGKFELSGIPPAPRGVPQVEVTFDIDANGILNVSAVEKST 360
LIQVYEGERAMT+DNNLLGKFELSGIPPAPRGVPQ+EVTFDIDANGILNVSA +KST
Sbjct: 440 LIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDKST 496
>sp|P11503|HSP70_ONCVO Heat shock 70 kDa protein (HSP70)
Length = 322
Score = 188 bits (478), Expect = 3e-48
Identities = 97/117 (82%), Positives = 103/117 (88%)
Frame = +1
Query: 10 ILSGERSEAVQNLLLLDVAPLSLGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGV 189
ILSG++SEAVQ+LLLLDVAPLSLGIETAGGVMTALIKRN YSDNQPGV
Sbjct: 136 ILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTSQTFTTYSDNQPGV 195
Query: 190 LIQVYEGERAMTRDNNLLGKFELSGIPPAPRGVPQVEVTFDIDANGILNVSAVEKST 360
LIQVYEGERAMT+DNNLLGKFELSGIPPAPRGVPQ+EVTFDIDANGILNVSA +KST
Sbjct: 196 LIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAQDKST 252
>sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70)
Length = 644
Score = 187 bits (476), Expect = 5e-48
Identities = 96/117 (82%), Positives = 103/117 (88%)
Frame = +1
Query: 10 ILSGERSEAVQNLLLLDVAPLSLGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGV 189
ILSG++SE VQ+LLLLDVAPLSLGIETAGGVMTALIKRN YSDNQPGV
Sbjct: 381 ILSGDKSENVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPSKQTQTFTTYSDNQPGV 440
Query: 190 LIQVYEGERAMTRDNNLLGKFELSGIPPAPRGVPQVEVTFDIDANGILNVSAVEKST 360
+IQVYEGERAMT+DNNLLGKFELSGIPPAPRGVPQ+EVTFDIDANGILNVSAV+KST
Sbjct: 441 MIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVDKST 497
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 187 bits (475), Expect = 6e-48
Identities = 96/117 (82%), Positives = 103/117 (88%)
Frame = +1
Query: 10 ILSGERSEAVQNLLLLDVAPLSLGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGV 189
ILSG++SEAVQ+LLLLDVAPLSLGIETAGGVMTALIKRN YSDNQPGV
Sbjct: 378 ILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTSETFTTYSDNQPGV 437
Query: 190 LIQVYEGERAMTRDNNLLGKFELSGIPPAPRGVPQVEVTFDIDANGILNVSAVEKST 360
LIQVYEGERA+T+DNNLLGKFELSGIPPAPRGVPQ+EVTFDIDANGILNVSA +KST
Sbjct: 438 LIQVYEGERALTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAQDKST 494
>sp|Q24789|HSP70_ECHGR Heat shock cognate 70 kDa protein (HSP70)
Length = 665
Score = 186 bits (472), Expect = 1e-47
Identities = 95/117 (81%), Positives = 102/117 (87%)
Frame = +1
Query: 10 ILSGERSEAVQNLLLLDVAPLSLGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGV 189
IL+G++SEAVQ+LLLLDVAPLSLG+ETAGGVMTALIKRN YSDNQPGV
Sbjct: 381 ILTGDKSEAVQDLLLLDVAPLSLGLETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGV 440
Query: 190 LIQVYEGERAMTRDNNLLGKFELSGIPPAPRGVPQVEVTFDIDANGILNVSAVEKST 360
LIQVYEGERAM RDNNLLGKFELSGIPP PRGVPQ+EVTFDIDANGILNVSAV+KST
Sbjct: 441 LIQVYEGERAMKRDNNLLGKFELSGIPPGPRGVPQIEVTFDIDANGILNVSAVDKST 497
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 184 bits (467), Expect = 5e-47
Identities = 94/117 (80%), Positives = 101/117 (86%)
Frame = +1
Query: 10 ILSGERSEAVQNLLLLDVAPLSLGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGV 189
ILSG++SE VQ+LLLLDV PLSLGIETAGGVMT LIKRN YSDNQPGV
Sbjct: 379 ILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGV 438
Query: 190 LIQVYEGERAMTRDNNLLGKFELSGIPPAPRGVPQVEVTFDIDANGILNVSAVEKST 360
LIQVYEGERAMT+DNNLLGKFEL+GIPPAPRGVPQ+EVTFDIDANGILNVSAV+KST
Sbjct: 439 LIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKST 495
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 184 bits (467), Expect = 5e-47
Identities = 94/117 (80%), Positives = 101/117 (86%)
Frame = +1
Query: 10 ILSGERSEAVQNLLLLDVAPLSLGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGV 189
ILSG++SE VQ+LLLLDV PLSLGIETAGGVMT LIKRN YSDNQPGV
Sbjct: 379 ILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGV 438
Query: 190 LIQVYEGERAMTRDNNLLGKFELSGIPPAPRGVPQVEVTFDIDANGILNVSAVEKST 360
LIQVYEGERAMT+DNNLLGKFEL+GIPPAPRGVPQ+EVTFDIDANGILNVSAV+KST
Sbjct: 439 LIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKST 495
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 184 bits (467), Expect = 5e-47
Identities = 94/117 (80%), Positives = 101/117 (86%)
Frame = +1
Query: 10 ILSGERSEAVQNLLLLDVAPLSLGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGV 189
ILSG++SE VQ+LLLLDV PLSLGIETAGGVMT LIKRN YSDNQPGV
Sbjct: 379 ILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGV 438
Query: 190 LIQVYEGERAMTRDNNLLGKFELSGIPPAPRGVPQVEVTFDIDANGILNVSAVEKST 360
LIQVYEGERAMT+DNNLLGKFEL+GIPPAPRGVPQ+EVTFDIDANGILNVSAV+KST
Sbjct: 439 LIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKST 495
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 184 bits (467), Expect = 5e-47
Identities = 94/117 (80%), Positives = 101/117 (86%)
Frame = +1
Query: 10 ILSGERSEAVQNLLLLDVAPLSLGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGV 189
ILSG++SE VQ+LLLLDV PLSLGIETAGGVMT LIKRN YSDNQPGV
Sbjct: 379 ILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGV 438
Query: 190 LIQVYEGERAMTRDNNLLGKFELSGIPPAPRGVPQVEVTFDIDANGILNVSAVEKST 360
LIQVYEGERAMT+DNNLLGKFEL+GIPPAPRGVPQ+EVTFDIDANGILNVSAV+KST
Sbjct: 439 LIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKST 495
>sp|P08418|HSP70_SCHMA Heat shock 70 kDa homolog protein (HSP70) (Major surface antigen)
Length = 637
Score = 183 bits (465), Expect = 9e-47
Identities = 93/117 (79%), Positives = 101/117 (86%)
Frame = +1
Query: 10 ILSGERSEAVQNLLLLDVAPLSLGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGV 189
ILSGE+ EAVQ+LLLLDVAPLSLG+ETAGGVMTALIKRN YSDNQPGV
Sbjct: 377 ILSGEKCEAVQDLLLLDVAPLSLGLETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQPGV 436
Query: 190 LIQVYEGERAMTRDNNLLGKFELSGIPPAPRGVPQVEVTFDIDANGILNVSAVEKST 360
LIQV+EGERA+T+DNNLLGKFELSGIPPAPRG PQ+EVTFDIDANGILNVSAV+K T
Sbjct: 437 LIQVFEGERALTKDNNLLGKFELSGIPPAPRGTPQIEVTFDIDANGILNVSAVDKGT 493
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.313 0.135 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,578,203
Number of Sequences: 369166
Number of extensions: 766291
Number of successful extensions: 2094
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2069
length of database: 68,354,980
effective HSP length: 87
effective length of database: 52,283,035
effective search space used: 1673057120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)