Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_024_C17
(864 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9UL16|CCDCJ_HUMAN Coiled-coil domain-containing protein... 83 9e-16
sp|P36044|MNN4_YEAST Protein MNN4 46 1e-04
sp|P37709|TRHY_RABIT Trichohyalin 44 8e-04
sp|Q14152|IF3A_HUMAN Eukaryotic translation initiation fact... 42 0.002
sp|Q5R8U3|SEP11_PONPY Septin-11 41 0.004
sp|Q07283|TRHY_HUMAN Trichohyalin 41 0.005
sp|Q8C1B7|SEP11_MOUSE Septin-11 40 0.008
sp|Q9NVA2|SEP11_HUMAN Septin-11 40 0.011
sp|Q03001|BPA1_HUMAN Bullous pemphigoid antigen 1 isoforms ... 40 0.011
sp|Q8IX21|CJ006_HUMAN Protein C10orf6 39 0.019
>sp|Q9UL16|CCDCJ_HUMAN Coiled-coil domain-containing protein 19 (Nasopharyngeal
epithelium-specific protein 1)
Length = 386
Score = 83.2 bits (204), Expect = 9e-16
Identities = 43/105 (40%), Positives = 69/105 (65%)
Frame = +3
Query: 357 MMASQSRRQEMKRHDIMRQKNDKMTDLEEEAYQKAQTLLKKAMEQRQEQEDEIKKLNELI 536
M A +R++ MK+ +++ N K++DLEE A ++AQ LL++A + R EQE+E+K ++++I
Sbjct: 1 MDAVMTRKKIMKQKEMVWNNNKKLSDLEEVAKERAQNLLQRANKLRMEQEEELKDMSKII 60
Query: 537 LNAKIQAVRDAQXXXXXXXXXXXXXXXQRLDKMMEIERINAIKMQ 671
LNAK A+RDAQ +RLD+MME+ER +I+ Q
Sbjct: 61 LNAKCHAIRDAQILEKQQIQKELDTEEKRLDQMMEVERQKSIQRQ 105
Score = 32.7 bits (73), Expect = 1.3
Identities = 26/105 (24%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Frame = +3
Query: 261 DAFNKLRNRARIISSEERIKRDENLKNQKNEEMMASQSRRQEMKRHDIMRQKNDKMTDLE 440
D K ++ + ++ I+R E L+ ++ EE + + RRQ +++ M + ++ + L
Sbjct: 84 DTEEKRLDQMMEVERQKSIQRQEELERKRREERI--RGRRQIVEQ---MEKNQEERSLLA 138
Query: 441 EEAYQKAQTLLKKAMEQRQEQ---EDEIKKLNELILNAKIQAVRD 566
E+ Q+ + +L+ MEQ QE+ + E ++ +L + A+I+ + D
Sbjct: 139 EQREQEKEQMLEY-MEQLQEEDLKDMERRQQQKLKMQAEIKRIND 182
>sp|P36044|MNN4_YEAST Protein MNN4
Length = 1178
Score = 46.2 bits (108), Expect = 1e-04
Identities = 27/78 (34%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Frame = +3
Query: 306 EERIKRDENLKNQKNEEMMASQSRRQEMKRHDIMRQKN---DKMTDLEEEAYQKAQTLLK 476
EE+ K++E K +K EE Q ++MK D +KN +K + EEE ++ + K
Sbjct: 1088 EEKKKQEEEEKKKKEEEEKKKQEEGEKMKNEDEENKKNEDEEKKKNEEEEKKKQEEKNKK 1147
Query: 477 KAMEQRQEQEDEIKKLNE 530
E++++QE+E KK NE
Sbjct: 1148 NEDEEKKKQEEEEKKKNE 1165
Score = 38.9 bits (89), Expect = 0.019
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Frame = +3
Query: 306 EERIKRDENLKNQKNEEMMASQSRRQEMKRHDIMRQKND---KMTDLEEEAYQKAQTLLK 476
EE+ K++E K +K EE Q ++ K+ + ++K + KM + +EE + K
Sbjct: 1072 EEKKKKEEEEKKKKEEEEKKKQEEEEKKKKEEEEKKKQEEGEKMKNEDEENKKNEDEEKK 1131
Query: 477 KAMEQRQEQEDEIKKLNE 530
K E+ +++++E K NE
Sbjct: 1132 KNEEEEKKKQEEKNKKNE 1149
Score = 32.7 bits (73), Expect = 1.3
Identities = 16/63 (25%), Positives = 37/63 (58%)
Frame = +3
Query: 321 RDENLKNQKNEEMMASQSRRQEMKRHDIMRQKNDKMTDLEEEAYQKAQTLLKKAMEQRQE 500
++E+ +N+KNE+ ++ +E K+ + +KN+ EE+ Q+ + K E++++
Sbjct: 1116 KNEDEENKKNEDEEKKKNEEEEKKKQEEKNKKNED----EEKKKQEEEEKKKNEEEEKKK 1171
Query: 501 QED 509
QE+
Sbjct: 1172 QEE 1174
>sp|P37709|TRHY_RABIT Trichohyalin
Length = 1407
Score = 43.5 bits (101), Expect = 8e-04
Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 2/170 (1%)
Frame = +3
Query: 63 RKANSNAELHIHEEPEMIISYGGNRKNYDNFIPEKEETIRIITKDMVRNLRVpreDPSLK 242
RK +L EE E+ + + + E EE R+ ++ R LR + +
Sbjct: 888 RKLREEEQLLRQEEQELRQERDRKLREEEQLLQESEEE-RLRRQERERKLREEEQLLRRE 946
Query: 243 SMVLDSDAFNKLRNRARIISS--EERIKRDENLKNQKNEEMMASQSRRQEMKRHDIMRQK 416
L + KLR +++ EER++R E + + EE + RR+E + +RQ+
Sbjct: 947 EQELRRERARKLREEEQLLQEREEERLRRQERARKLREEEQLL---RREEQE----LRQE 999
Query: 417 NDKMTDLEEEAYQKAQTLLKKAMEQRQEQEDEIKKLNELILNAKIQAVRD 566
D+ EE+ Q+ + + E+ ++ +E ++L L + + RD
Sbjct: 1000 RDRKFREEEQLLQEREEERLRRQERDRKFREEERQLRRQELEEQFRQERD 1049
Score = 42.0 bits (97), Expect = 0.002
Identities = 33/163 (20%), Positives = 76/163 (46%), Gaps = 4/163 (2%)
Frame = +3
Query: 54 LKLRKANSNAELHIHEEPEMIISYGGNRK--NYDNFIPEKEETIRIITKDMVRNLRVpre 227
L+ RK +L E E + RK + + ++E+ +R ++ R LR +
Sbjct: 601 LRDRKLREEEQLLQEREEERLRRQERERKLREEEQLLRQEEQELR---QERERKLREEEQ 657
Query: 228 DPSLKSMVLDSDAFNKLRNRARIISS--EERIKRDENLKNQKNEEMMASQSRRQEMKRHD 401
+ L + KLR +++ EER++R E + + EE + Q ++
Sbjct: 658 LLRREEQELRQERERKLREEEQLLQEREEERLRRQERARKLREEEQLLRQEEQE------ 711
Query: 402 IMRQKNDKMTDLEEEAYQKAQTLLKKAMEQRQEQEDEIKKLNE 530
+RQ+ ++ EE+ ++ + LL++ +++ +E+++ + +E
Sbjct: 712 -LRQERERKLREEEQLLRREEQLLRQERDRKLREEEQLLQESE 753
Score = 41.2 bits (95), Expect = 0.004
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 16/172 (9%)
Frame = +3
Query: 63 RKANSNAELHIHEEPEMIISYGGNRK--NYDNFIPEKEETIRIITKDMVRNLRVP----- 221
RK +L E E + RK + + E+EE R+ ++ R LR
Sbjct: 772 RKFREEEQLLQEREEERLRRQERERKLREEEQLLQEREEE-RLRRQERERKLREEEQLLQ 830
Query: 222 -REDPSLKSMVLDSDAFNKLRNRARIISSEERIKRDENLKNQKNEEMMASQSR---RQEM 389
RE+ L+ + KLR +++ EE+ R E + + EE + Q RQE
Sbjct: 831 EREEERLRRQERE----RKLREEEQLLRQEEQELRQERARKLREEEQLLRQEEQELRQER 886
Query: 390 KR-----HDIMRQKNDKMTDLEEEAYQKAQTLLKKAMEQRQEQEDEIKKLNE 530
R ++RQ+ ++ + ++ + LL+++ E+R +++ +KL E
Sbjct: 887 DRKLREEEQLLRQEEQELRQERDRKLREEEQLLQESEEERLRRQERERKLRE 938
Score = 39.3 bits (90), Expect = 0.014
Identities = 36/168 (21%), Positives = 75/168 (44%), Gaps = 12/168 (7%)
Frame = +3
Query: 63 RKANSNAELHIHEEPEMIISYGGNRK--NYDNFIPEKEETIRIITKDMVRNLRVpreDPS 236
RK +L E E + RK + + ++E+ +R ++ R LR +
Sbjct: 820 RKLREEEQLLQEREEERLRRQERERKLREEEQLLRQEEQELR---QERARKLREEEQLLR 876
Query: 237 LKSMVLDSDAFNKLRNRARIISSEE---RIKRDENLKNQKN--EEMMASQSRRQEMKR-- 395
+ L + KLR +++ EE R +RD L+ ++ +E + RRQE +R
Sbjct: 877 QEEQELRQERDRKLREEEQLLRQEEQELRQERDRKLREEEQLLQESEEERLRRQERERKL 936
Query: 396 ---HDIMRQKNDKMTDLEEEAYQKAQTLLKKAMEQRQEQEDEIKKLNE 530
++R++ ++ ++ + LL++ E+R +++ +KL E
Sbjct: 937 REEEQLLRREEQELRRERARKLREEEQLLQEREEERLRRQERARKLRE 984
Score = 38.9 bits (89), Expect = 0.019
Identities = 41/197 (20%), Positives = 89/197 (45%), Gaps = 17/197 (8%)
Frame = +3
Query: 24 DENLFGEPNYLKLRKANSNAELHIHEEPEMIISYGGNRKNYDNFIPEKEETIRIITKDMV 203
+E L E +LR+ +L + + + + + E+EE R+ ++
Sbjct: 745 EEQLLQESEEERLRRQEREQQLRRERDRKF--------REEEQLLQEREEE-RLRRQERE 795
Query: 204 RNLRVP------REDPSLKSMVLDSDAFNKLRNRARIISS--EERIKRDENLKNQKNEEM 359
R LR RE+ L+ + KLR +++ EER++R E + + EE
Sbjct: 796 RKLREEEQLLQEREEERLRRQERE----RKLREEEQLLQEREEERLRRQERERKLREEEQ 851
Query: 360 MASQSR---RQEMKR-----HDIMRQKNDKM-TDLEEEAYQKAQTLLKKAMEQRQEQEDE 512
+ Q RQE R ++RQ+ ++ + + + ++ Q L ++ E RQE++ +
Sbjct: 852 LLRQEEQELRQERARKLREEEQLLRQEEQELRQERDRKLREEEQLLRQEEQELRQERDRK 911
Query: 513 IKKLNELILNAKIQAVR 563
+++ +L+ ++ + +R
Sbjct: 912 LREEEQLLQESEEERLR 928
Score = 37.0 bits (84), Expect = 0.071
Identities = 36/194 (18%), Positives = 76/194 (39%), Gaps = 38/194 (19%)
Frame = +3
Query: 63 RKANSNAELHIHEEPEMIISYGGNRKNYDNFIPEKEETIRIITKDMVRNLRVpreDPSLK 242
RK +L EE E+ + + + E+EE R+ ++ R LR + +
Sbjct: 934 RKLREEEQLLRREEQELRRERARKLREEEQLLQEREEE-RLRRQERARKLREEEQLLRRE 992
Query: 243 SMVLDSDAFNKLRNRARIISS--EERIKR-------------------DENLKNQKNEEM 359
L + K R +++ EER++R +E + +++ +
Sbjct: 993 EQELRQERDRKFREEEQLLQEREEERLRRQERDRKFREEERQLRRQELEEQFRQERDRKF 1052
Query: 360 MASQSRRQEMKRHDIMRQKNDKMTDLEEE-----------------AYQKAQTLLKKAME 488
+ RQE + + RQ+ D+ EE+ +++ + LL++ E
Sbjct: 1053 RLEEQIRQEKEEKQLRRQERDRKFREEEQQRRRQEREQQLRRERDRKFREEEQLLQEREE 1112
Query: 489 QRQEQEDEIKKLNE 530
+R +++ +KL E
Sbjct: 1113 ERLRRQERARKLRE 1126
Score = 36.6 bits (83), Expect = 0.093
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 13/107 (12%)
Frame = +3
Query: 231 PSLKSMVLDSDAFNKLRNRARIISSEERIKRDENLKNQKNEEMMASQSRRQEMKRHDIMR 410
PSL+ L ++ + R R E+R +R + L+ + EE + + R Q+++ D +
Sbjct: 446 PSLRERQLRAEERQEQEQRFRE-EEEQRRERRQELQFLEEEEQLQRRERAQQLQEEDSFQ 504
Query: 411 QKNDKMT-------------DLEEEAYQKAQTLLKKAMEQRQEQEDE 512
+ ++ L+EEA ++ TL K +Q Q +E+E
Sbjct: 505 EDRERRRRQQEQRPGQTWRWQLQEEAQRRRHTLYAKPGQQEQLREEE 551
Score = 36.6 bits (83), Expect = 0.093
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Frame = +3
Query: 162 EKEETIRIITKDMVRNLRVpreDPSLKSMVLDSDAFNKLRNRARIISS--EERIKRDENL 335
E E+ R + R L R++ L+ KLR +++ EER++R E
Sbjct: 576 EDEKRRRQERERQYRELEELRQEEQLRD--------RKLREEEQLLQEREEERLRRQERE 627
Query: 336 KNQKNEEMMASQSRRQ-EMKRHDIMRQKNDKMTDLEEEAYQKAQTLLKKAMEQRQEQEDE 512
+ + EE + Q ++ +R +R++ + E+E Q+ + L++ + QE+E+E
Sbjct: 628 RKLREEEQLLRQEEQELRQERERKLREEEQLLRREEQELRQERERKLREEEQLLQEREEE 687
Score = 36.6 bits (83), Expect = 0.093
Identities = 35/156 (22%), Positives = 73/156 (46%), Gaps = 3/156 (1%)
Frame = +3
Query: 63 RKANSNAELHIHEEPEMIISYGGNRKNYDNFIPEKEETIRIITKDMVRNL-RVpreDPSL 239
RK +L EE E+ R+ + + E+E+ +R +++ + R RE+ L
Sbjct: 628 RKLREEEQLLRQEEQEL-------RQERERKLREEEQLLRREEQELRQERERKLREEEQL 680
Query: 240 KSMVLDSDAFNKLRN--RARIISSEERIKRDENLKNQKNEEMMASQSRRQEMKRHDIMRQ 413
L +LR RAR + EE++ R E + ++ E + + + ++RQ
Sbjct: 681 ----LQEREEERLRRQERARKLREEEQLLRQEEQELRQERERKLREEEQLLRREEQLLRQ 736
Query: 414 KNDKMTDLEEEAYQKAQTLLKKAMEQRQEQEDEIKK 521
+ D+ EE+ Q+++ + +RQE+E ++++
Sbjct: 737 ERDRKLREEEQLLQESE----EERLRRQEREQQLRR 768
Score = 36.6 bits (83), Expect = 0.093
Identities = 24/108 (22%), Positives = 55/108 (50%), Gaps = 11/108 (10%)
Frame = +3
Query: 273 KLRNRARIISS--EERIKRDENLKNQKNEEMMASQSR---RQEMKR-----HDIMRQKND 422
KLR +++ EER++R E + + EE + Q RQE R ++RQ+
Sbjct: 1169 KLREEEQLLQEREEERLRRQERARKLREEEQLLRQEEQELRQERARKLREEEQLLRQEEQ 1228
Query: 423 KMTDLEEEAYQKAQTLLKK-AMEQRQEQEDEIKKLNELILNAKIQAVR 563
++ + +++ + LL++ E R+E++ + ++ +L+ + + +R
Sbjct: 1229 ELRQERDRKFREEEQLLRREEQELRRERDRKFREEEQLLQEREEERLR 1276
Score = 35.4 bits (80), Expect = 0.21
Identities = 26/132 (19%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
Frame = +3
Query: 147 DNFIPEKEETIRIITKDMVRNLRVpreDPSLKSMVLDSDAFNKLRNRARIISSEERIKRD 326
+ + E+EE R+ ++ R LR + + L + KLR E+ ++R+
Sbjct: 610 EQLLQEREEE-RLRRQERERKLREEEQLLRQEEQELRQERERKLREE------EQLLRRE 662
Query: 327 E-NLKNQKNEEMMASQSRRQEMKRHDIMRQKNDKMTDLEEEAYQKAQTLLKKAMEQRQEQ 503
E L+ ++ ++ + QE + + RQ+ + EE+ ++ + L++ E++ +
Sbjct: 663 EQELRQERERKLREEEQLLQEREEERLRRQERARKLREEEQLLRQEEQELRQERERKLRE 722
Query: 504 EDEIKKLNELIL 539
E+++ + E +L
Sbjct: 723 EEQLLRREEQLL 734
Score = 34.3 bits (77), Expect = 0.46
Identities = 23/100 (23%), Positives = 50/100 (50%), Gaps = 14/100 (14%)
Frame = +3
Query: 279 RNRARIISSEERIKRDENLKNQKNEEMMA----SQSRRQEMKRHDIMRQKNDKMTDLEEE 446
+ R R EE+++R+E+ K ++ E + R++E R +R++ + + EEE
Sbjct: 560 QEREREYREEEKLQREEDEKRRRQERERQYRELEELRQEEQLRDRKLREEEQLLQEREEE 619
Query: 447 AYQKA----------QTLLKKAMEQRQEQEDEIKKLNELI 536
++ Q L ++ E RQE+E ++++ +L+
Sbjct: 620 RLRRQERERKLREEEQLLRQEEQELRQERERKLREEEQLL 659
Score = 34.3 bits (77), Expect = 0.46
Identities = 42/192 (21%), Positives = 82/192 (42%), Gaps = 23/192 (11%)
Frame = +3
Query: 24 DENLFGEPNYLKLRKANSNAELHIHEE----PEMIISYGGNRK--NYDNFIPEKEETIRI 185
+E L E +LR+ +L E+ E ++ +RK + + E EE R+
Sbjct: 1103 EEQLLQEREEERLRRQERARKLREEEQLLRREEQLLRQERDRKFREEEQLLQESEEE-RL 1161
Query: 186 ITKDMVRNLRVpreDPSLKSMVLDSDAFNKLRN--RARIISSEERI-------KRDENLK 338
++ R LR + +L +LR RAR + EE++ R E +
Sbjct: 1162 RRQERERKLREEEQ-------LLQEREEERLRRQERARKLREEEQLLRQEEQELRQERAR 1214
Query: 339 NQKNEEMMASQSR---RQEMKR-----HDIMRQKNDKMTDLEEEAYQKAQTLLKKAMEQR 494
+ EE + Q RQE R ++R++ ++ + +++ + LL++ E+R
Sbjct: 1215 KLREEEQLLRQEEQELRQERDRKFREEEQLLRREEQELRRERDRKFREEEQLLQEREEER 1274
Query: 495 QEQEDEIKKLNE 530
+++ +KL E
Sbjct: 1275 LRRQERARKLRE 1286
Score = 33.1 bits (74), Expect = 1.0
Identities = 33/154 (21%), Positives = 67/154 (43%), Gaps = 1/154 (0%)
Frame = +3
Query: 63 RKANSNAELHIHEEPEMIISYGGNRKNYDNFIPEKEETIRIITKDMVRNLRVpreDPSLK 242
RK +L EE E+ + + + E+EE R+ ++ R LR E
Sbjct: 1236 RKFREEEQLLRREEQELRRERDRKFREEEQLLQEREEE-RLRRQERARKLREEEEQ---- 1290
Query: 243 SMVLDSDAFNKLRN-RARIISSEERIKRDENLKNQKNEEMMASQSRRQEMKRHDIMRQKN 419
++ + +LR R R +EE+ R+E + + E + RR+ R++
Sbjct: 1291 -LLFEEQEEQRLRQERDRRYRAEEQFAREEKSRRLERELRQEEEQRRR--------RERE 1341
Query: 420 DKMTDLEEEAYQKAQTLLKKAMEQRQEQEDEIKK 521
K + E+ Q+ + ++ + +RQ +ED+ ++
Sbjct: 1342 RKFRE-EQLRRQQEEEQRRRQLRERQFREDQSRR 1374
Score = 32.3 bits (72), Expect = 1.8
Identities = 18/88 (20%), Positives = 46/88 (52%)
Frame = +3
Query: 309 ERIKRDENLKNQKNEEMMASQSRRQEMKRHDIMRQKNDKMTDLEEEAYQKAQTLLKKAME 488
ER ++ E ++ E+++ + R+E + +R++ +++ + E+ Q+ + + E
Sbjct: 227 ERREQHERALQEEEEQLLRQRRWREEpreQQQLRRELEEIREREQRLEQEERREQQLRRE 286
Query: 489 QRQEQEDEIKKLNELILNAKIQAVRDAQ 572
QR EQE+ E L +++ +R+ +
Sbjct: 287 QRLEQEER----REQQLRRELEEIRERE 310
Score = 32.0 bits (71), Expect = 2.3
Identities = 29/137 (21%), Positives = 63/137 (45%), Gaps = 5/137 (3%)
Frame = +3
Query: 135 RKNYDNFIPEKEETIRIITKDMVRNLR---VpreDPSLKSMVLDSDAFNKLRNRARIISS 305
R+ ++ + E+EE ++R R pre L+ R I
Sbjct: 229 REQHERALQEEEE-------QLLRQRRWREEpreQQQLR------------RELEEIRER 269
Query: 306 EERIKRDENLKNQKNEEMMASQSRRQEMKRHDIMRQKNDKMTDLEEEAYQKAQTLLKKAM 485
E+R++++E + Q E Q R+E + +R++ +++ + E+ Q+ + +
Sbjct: 270 EQRLEQEERREQQLRREQRLEQEERREQQ----LRRELEEIREREQRLEQEERREQRLEQ 325
Query: 486 EQRQEQE--DEIKKLNE 530
E+R+EQ+ E++++ E
Sbjct: 326 EERREQQLKRELEEIRE 342
Score = 31.2 bits (69), Expect = 3.9
Identities = 35/173 (20%), Positives = 70/173 (40%), Gaps = 18/173 (10%)
Frame = +3
Query: 57 KLRKANSNAELHIHEEPEMIISYGGNRKNYDNFIPEKEETIRIITKDMVRNLRVpreDPS 236
+ RK +L EE E+ + + + ++E+ +R ++ R R +
Sbjct: 1190 RARKLREEEQLLRQEEQELRQERARKLREEEQLLRQEEQELR---QERDRKFREEEQLLR 1246
Query: 237 LKSMVLDSDAFNKLRNRARIISS--EERIKRDENLKNQKNEEMMA------SQSRRQEMK 392
+ L + K R +++ EER++R E + + EE Q RQE
Sbjct: 1247 REEQELRRERDRKFREEEQLLQEREEERLRRQERARKLREEEEQLLFEEQEEQRLRQERD 1306
Query: 393 RHDIMRQ---KNDKMTDLEEEAYQKAQTLLKKAMEQ-------RQEQEDEIKK 521
R + + +K LE E Q+ + ++ E+ R++QE+E ++
Sbjct: 1307 RRYRAEEQFAREEKSRRLERELRQEEEQRRRRERERKFREEQLRRQQEEEQRR 1359
Score = 30.8 bits (68), Expect = 5.1
Identities = 23/90 (25%), Positives = 45/90 (50%)
Frame = +3
Query: 279 RNRARIISSEERIKRDENLKNQKNEEMMASQSRRQEMKRHDIMRQKNDKMTDLEEEAYQK 458
R R + SE ++ + + +E QS RQ+ +R RQ+ ++ +LEE+A ++
Sbjct: 374 RRWQRQLESEAGARQSKVYSRPRRQE---EQSLRQDQER----RQRQERERELEEQARRQ 426
Query: 459 AQTLLKKAMEQRQEQEDEIKKLNELILNAK 548
Q ++ E+R+++ L E L A+
Sbjct: 427 QQWQAEEESERRRQRLSARPSLRERQLRAE 456
>sp|Q14152|IF3A_HUMAN Eukaryotic translation initiation factor 3 subunit 10 (eIF-3 theta)
(eIF3 p167) (eIF3 p180) (eIF3 p185) (eIF3a)
Length = 1382
Score = 42.4 bits (98), Expect = 0.002
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 6/151 (3%)
Frame = +3
Query: 99 EEPEMIISYGGNRKNYDNFIPEKEETIRIITKDMVRNLRVpreDPSLKSMVLDSDAFNKL 278
EE +I S ++ D + E++E RI T + R + ++ + M+ D D F
Sbjct: 705 EEIPLIKSAYEEQRIKDMDLWEQQEEERITTMQLEREKALEHKN-RMSRMLEDRDLFVMR 763
Query: 279 RNRARIISSEERIKR-DENLKNQKNEEMMASQSRRQEMKRHDIMRQKNDKMTDLEEEAYQ 455
AR EE++K+ +E L +++ + + +R+E +R R+K ++ EE
Sbjct: 764 LKAARQSVYEEKLKQFEERLAEERHNRLEERKRQRKEERRITYYREKEEEEQRRAEEQML 823
Query: 456 KAQTLLKKAMEQRQEQE-----DEIKKLNEL 533
K + ++A ++E+E + +KKL E+
Sbjct: 824 KEREERERAERAKREEELREYQERVKKLEEV 854
>sp|Q5R8U3|SEP11_PONPY Septin-11
Length = 425
Score = 41.2 bits (95), Expect = 0.004
Identities = 32/137 (23%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Frame = +3
Query: 138 KNYDNFIPEKEETIRIITKDMVRNLRVpreDPSLKSMVLDSDAFNKLRNRARIISSEERI 317
+N+ +F+ +E IR+ +D+ R R + L+ F ++ S +E
Sbjct: 265 ENHCDFVKLREMLIRVNMEDL-REQTHTRHYELYRRCKLEEMGFKDTDPDSKPFSLQETY 323
Query: 318 KRDENLKNQKNEEMMASQSRRQEMKRHDIMR--QKNDKMTDLEEEAYQKAQTLLKKAMEQ 491
K ++NE + Q + +EM++ +MR +K ++ + E+E ++K L + E+
Sbjct: 324 KA------KRNEFLGELQKKEEEMRQMFVMRVKEKEAELKEAEKELHEKFDLLKRTHQEE 377
Query: 492 RQEQEDEIKKLNELILN 542
+++ ED+ K+L E + N
Sbjct: 378 KKKVEDKKKELEEEVNN 394
>sp|Q07283|TRHY_HUMAN Trichohyalin
Length = 1898
Score = 40.8 bits (94), Expect = 0.005
Identities = 40/159 (25%), Positives = 70/159 (44%), Gaps = 2/159 (1%)
Frame = +3
Query: 42 EPNYLKLRKANSNAELHIHEEPEMIISYGGNRKNYDNFIPEKEETIRIITKDMVRNLRVP 221
E Y K +K E + EEPE +K + ++EE +++ ++ + R
Sbjct: 974 ERQYRKDKKLQQKEEQLLGEEPEKRRRQEREKKYREEEELQQEEE-QLLREEREKRRRQE 1032
Query: 222 REDPSLKSMVLDSDAFNKLRNRA--RIISSEERIKRDENLKNQKNEEMMASQSRRQEMKR 395
E K L + LR R + ER R+E Q+ E+++ + R+ +R
Sbjct: 1033 WERQYRKKDELQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQLLGEE--RETRRR 1090
Query: 396 HDIMRQKNDKMTDLEEEAYQKAQTLLKKAMEQRQEQEDE 512
++ RQ EEE Q+ + LL++ E+R+ QE E
Sbjct: 1091 QELERQYRK-----EEELQQEEEQLLREEPEKRRRQERE 1124
Score = 40.0 bits (92), Expect = 0.008
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Frame = +3
Query: 204 RNLRVpreDPSLKSMVLDSDAFNKLRNRARIISSEERIKRDENLKNQKNEEMMASQSRRQ 383
R R+ RE L + +L R +ER+KR+E + +++E + +S Q
Sbjct: 605 RQQRLKREQEERLEQRLKREEVERLEQEER---RDERLKREEPEEERRHELL---KSEEQ 658
Query: 384 EMKRHDIMR----QKNDKMTDLEEEAYQKAQTLLKKAMEQRQEQE 506
E +RH+ +R ++ ++ EEE + Q L ++ E+R+EQE
Sbjct: 659 EERRHEQLRREQQERREQRLKREEEEERLEQRLKREHEEERREQE 703
Score = 39.3 bits (90), Expect = 0.014
Identities = 23/117 (19%), Positives = 54/117 (46%)
Frame = +3
Query: 156 IPEKEETIRIITKDMVRNLRVpreDPSLKSMVLDSDAFNKLRNRARIISSEERIKRDENL 335
+ E+EE +R + + +R R E +LR ++ +E +R++
Sbjct: 271 LQEEEEQLRKLERQELRRERQEEEQQQ-----------QRLRREQQLRRKQEEERREQQE 319
Query: 336 KNQKNEEMMASQSRRQEMKRHDIMRQKNDKMTDLEEEAYQKAQTLLKKAMEQRQEQE 506
+ ++ +E Q R+E + ++ ++ E+E ++ Q L ++ E+R+EQ+
Sbjct: 320 ERREQQERREQQEERREQQLRREQEERREQQLRREQEEERREQQLRREQEEERREQQ 376
Score = 38.5 bits (88), Expect = 0.024
Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
Frame = +3
Query: 132 NRKNYDNFIPEKEETIRIITKDM-VRNLRVpreDPSLKSMVLDSDAFNKLRNRARIISSE 308
+R+ D E+E+ +R +D R + ++P K + + + R R + + E
Sbjct: 1435 HRQERDRKFLEEEQQLRRQERDRKFREQELRSQEPERKFLEEEQQLHRQQRQR-KFLQEE 1493
Query: 309 ERIKRDEN---LKNQKNEEMMASQSRRQEMKRHDIMRQKNDKMTDLEEEAYQKAQTLLKK 479
++++R E + ++ + + RQE + + RQ+ D+ LEE+ ++ Q +K
Sbjct: 1494 QQLRRQERGQQRRQDRDRKFREEEQLRQEREEQQLSRQERDRKFRLEEQKVRR-QEQERK 1552
Query: 480 AMEQRQE 500
ME Q+
Sbjct: 1553 FMEDEQQ 1559
Score = 37.0 bits (84), Expect = 0.071
Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Frame = +3
Query: 156 IPEKEETIRIITKDMVRNLRVpreDPSLKSMVLDSDAFNKLRNRARIISSEERIKRDENL 335
+ E+EE ++ ++ R R+ + + + + + R ER R +
Sbjct: 923 LQEEEEELQREEREKRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQERERQYRKDKK 982
Query: 336 KNQKNEEMMASQSRRQEMKRHDIMRQKNDKMTDLEEEAYQKAQTLLKKAME--QRQEQED 509
QK E+++ + ++ RQ+ +K EEE Q+ + LL++ E +RQE E
Sbjct: 983 LQQKEEQLLGEEPEKRR-------RQEREKKYREEEELQQEEEQLLREEREKRRRQEWER 1035
Query: 510 EIKKLNEL 533
+ +K +EL
Sbjct: 1036 QYRKKDEL 1043
Score = 36.6 bits (83), Expect = 0.093
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Frame = +3
Query: 204 RNLRVpreDPSLKSMVLDSDAFNKLRNRARIISSEERIKRDENLKNQKNEEMMASQSRRQ 383
R R + + L D + R R + EER ++ E + Q E + R Q
Sbjct: 479 REEETERHEQERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQ--EERREQ 536
Query: 384 EMKRHDI---MRQKNDKMTDLEEEAYQKAQTLLKKAMEQRQEQEDEIKKL 524
+KR + ++Q+ L E ++ + LLK+ E+R EQE ++L
Sbjct: 537 RLKRQEEEERLQQRLRSEQQLRREQEERLEQLLKREEEKRLEQERREQRL 586
Score = 36.2 bits (82), Expect = 0.12
Identities = 22/82 (26%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Frame = +3
Query: 306 EERIKRDEN-----LKNQKNEEMMASQSRRQEMKRHDIMRQKNDKMTDLEEEAYQKAQTL 470
E+R+KR++ LK ++ E + R+Q++KR D ++ ++ LEEE ++ Q
Sbjct: 463 EQRLKREQEERRDWLKREEETERHEQERRKQQLKR-DQEEERRERWLKLEEEERREQQER 521
Query: 471 LKKAM--EQRQEQEDEIKKLNE 530
++ + EQ + +E +K+ E
Sbjct: 522 REQQLRREQEERREQRLKRQEE 543
Score = 36.2 bits (82), Expect = 0.12
Identities = 21/112 (18%), Positives = 56/112 (50%), Gaps = 3/112 (2%)
Frame = +3
Query: 204 RNLRVpreDPSLKSMVLDSDAFNKLRNRARIISSEERIKRDENLKNQKNEEMMASQSRRQ 383
R R+ RE + +L + R + + E+ + ++ LK ++ E + + R +
Sbjct: 582 REQRLKREQEERRDQLLKREE----ERRQQRLKREQEERLEQRLKREEVERLEQEERRDE 637
Query: 384 EMKRHDIMRQKNDKMTDLEEEAYQKAQTLLKKAMEQRQE---QEDEIKKLNE 530
+KR + ++ ++ EE+ ++ + L ++ E+R++ +E+E ++L +
Sbjct: 638 RLKREEPEEERRHELLKSEEQEERRHEQLRREQQERREQRLKREEEEERLEQ 689
Score = 35.8 bits (81), Expect = 0.16
Identities = 34/162 (20%), Positives = 75/162 (46%), Gaps = 7/162 (4%)
Frame = +3
Query: 66 KANSNAELHIHEEPEMIISYGGNRKNYDNFIPEKEETIRIITKDMVRNLRVpreDPSLKS 245
K E H E + + + + ++ +EE R + + LR +E+ +
Sbjct: 478 KREEETERHEQERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQLRREQEERREQR 537
Query: 246 MVLDSDAFNKLRNRARIISSEERIKRDENLKNQ----KNEEMMASQSRRQEMKRHDIMRQ 413
+ + +L+ R R SE++++R++ + + + EE Q RR++ + + +
Sbjct: 538 LKRQEEE-ERLQQRLR---SEQQLRREQEERLEQLLKREEEKRLEQERREQRLKRE-QEE 592
Query: 414 KNDKMTDLEEEAYQKAQTLLKKAMEQRQEQ---EDEIKKLNE 530
+ D++ EEE + Q LK+ E+R EQ +E+++L +
Sbjct: 593 RRDQLLKREEE---RRQQRLKREQEERLEQRLKREEVERLEQ 631
Score = 35.4 bits (80), Expect = 0.21
Identities = 22/67 (32%), Positives = 38/67 (56%)
Frame = +3
Query: 309 ERIKRDENLKNQKNEEMMASQSRRQEMKRHDIMRQKNDKMTDLEEEAYQKAQTLLKKAME 488
E+ +R++ LK ++ EE R +E +RH+ R+K D EEE + + LK E
Sbjct: 458 EQERREQRLKREQ-EERRDWLKREEETERHEQERRKQQLKRDQEEE---RRERWLKLEEE 513
Query: 489 QRQEQED 509
+R+EQ++
Sbjct: 514 ERREQQE 520
Score = 35.4 bits (80), Expect = 0.21
Identities = 19/69 (27%), Positives = 41/69 (59%)
Frame = +3
Query: 306 EERIKRDENLKNQKNEEMMASQSRRQEMKRHDIMRQKNDKMTDLEEEAYQKAQTLLKKAM 485
+E++++++ L ++ EE+ Q +E +R RQ+ ++ EE+ Q+ + LL++
Sbjct: 913 QEQLRKEQQLLQEEEEEL---QREEREKRR----RQEQERQYREEEQLQQEEEQLLREER 965
Query: 486 EQRQEQEDE 512
E+R+ QE E
Sbjct: 966 EKRRRQERE 974
Score = 35.4 bits (80), Expect = 0.21
Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
Frame = +3
Query: 279 RNRARIISSEERIKRDENLKNQKNE-EMMASQSRRQEMKRHDIMRQKNDKMTDLE-EEAY 452
R + EE++ R+E K ++ E E + + + ++R++ +K E E Y
Sbjct: 1098 RKEEELQQEEEQLLREEPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQELERQY 1157
Query: 453 QKAQTLLKKAMEQRQEQEDEIKKLNELILNAKIQAVRD 566
++ + L ++ +QR ED+ L K AVRD
Sbjct: 1158 REEEELQRQKRKQRYRDEDQRSDLKWQWEPEKENAVRD 1195
Score = 34.7 bits (78), Expect = 0.35
Identities = 14/75 (18%), Positives = 40/75 (53%)
Frame = +3
Query: 285 RARIISSEERIKRDENLKNQKNEEMMASQSRRQEMKRHDIMRQKNDKMTDLEEEAYQKAQ 464
R + + E++++R++ L+ ++ R Q+++R +R++ + EEE +++
Sbjct: 398 REQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQKH 457
Query: 465 TLLKKAMEQRQEQED 509
++ ++EQE+
Sbjct: 458 EQERREQRLKREQEE 472
Score = 34.3 bits (77), Expect = 0.46
Identities = 17/80 (21%), Positives = 41/80 (51%)
Frame = +3
Query: 285 RARIISSEERIKRDENLKNQKNEEMMASQSRRQEMKRHDIMRQKNDKMTDLEEEAYQKAQ 464
R + + E++++R++ L+ ++ R QE +RH+ ++ + L+ E ++
Sbjct: 416 REQQLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERRD 475
Query: 465 TLLKKAMEQRQEQEDEIKKL 524
L ++ +R EQE ++L
Sbjct: 476 WLKREEETERHEQERRKQQL 495
Score = 33.9 bits (76), Expect = 0.60
Identities = 25/129 (19%), Positives = 59/129 (45%), Gaps = 5/129 (3%)
Frame = +3
Query: 159 PEKEETIRIITKDMVRNLRVpreDP--SLKSMVLDSDAFNKLRNRARIISSEERIKRDEN 332
P++E+ R ++ R R ++ + V + + R R ++ EE ++E
Sbjct: 205 PDEEQLRRRELLELRRKGREEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQEEE 264
Query: 333 LKNQKN---EEMMASQSRRQEMKRHDIMRQKNDKMTDLEEEAYQKAQTLLKKAMEQRQEQ 503
+ Q+ EE + RQE++R ++ + E++ +K + ++ E+R+EQ
Sbjct: 265 PQRQRELQEEEEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQ 324
Query: 504 EDEIKKLNE 530
++ ++ E
Sbjct: 325 QERREQQEE 333
Score = 33.5 bits (75), Expect = 0.79
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Frame = +3
Query: 285 RARIISSEERIKRDENLKNQKNEEMMASQSRRQEMKRHDIMRQKNDKMTDL--EEEAYQK 458
R + + E++++R++ L+ ++ EE Q QE + + R++ ++ L EEE +
Sbjct: 428 REQQLRREQQLRREQQLRREQEEERH-EQKHEQERREQRLKREQEERRDWLKREEETERH 486
Query: 459 AQTLLKKAMEQRQEQE 506
Q K+ +++ QE+E
Sbjct: 487 EQERRKQQLKRDQEEE 502
Score = 33.5 bits (75), Expect = 0.79
Identities = 31/163 (19%), Positives = 69/163 (42%), Gaps = 13/163 (7%)
Frame = +3
Query: 63 RKANSNAELHIHEEPEMIISYGGNRKNYDNFIPEKEETIRIITKDMVRNLRVpreDPSLK 242
RK +L E + ++ +RK + + +E+ + + ++ + LR RE LK
Sbjct: 1294 RKFREEEQLLQEREEQPLLRQERDRKFREEELLHQEQGRKFLEEE--QRLREERERKFLK 1351
Query: 243 SMV---------LDSDAFNKLRNRARIISSEERIKR----DENLKNQKNEEMMASQSRRQ 383
L D K R + +S +ER ++ ++ ++ Q+ E + ++
Sbjct: 1352 EEQQLRLEEREQLRQDRDRKFREEEQQLSRQERDRKFREEEQQVRRQERERKFLEEEQQL 1411
Query: 384 EMKRHDIMRQKNDKMTDLEEEAYQKAQTLLKKAMEQRQEQEDE 512
+RH R++ + + EE+ + + K E++Q + E
Sbjct: 1412 RQERHRKFREEEQLLQEREEQQLHRQERDRKFLEEEQQLRRQE 1454
Score = 32.3 bits (72), Expect = 1.8
Identities = 23/93 (24%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Frame = +3
Query: 306 EERIKRDENLKNQKNEEMMASQSRRQEMKRHDIMRQKNDKMTDLEEEAYQKAQTLLKKAM 485
EE+++R E L+ ++ Q RR+ R + +++ +K E +K + L++
Sbjct: 207 EEQLRRRELLELRRKGREEKQQQRRERQDR--VFQEEEEKEWRKRETVLRKEEEKLQEEE 264
Query: 486 EQRQ----EQEDEIKKLNELILNAKIQAVRDAQ 572
QRQ E+E++++KL L + Q Q
Sbjct: 265 PQRQRELQEEEEQLRKLERQELRRERQEEEQQQ 297
Score = 32.0 bits (71), Expect = 2.3
Identities = 15/79 (18%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +3
Query: 306 EERIKRDENLKNQKNEEMMASQSRRQEMKRHDIMRQKNDKMTDLEEEAY-QKAQTLLKKA 482
+ER R+E Q+ E+++ + ++ + + +K+ K+ EE+ ++ + ++
Sbjct: 943 QERQYREEEQLQQEEEQLLREEREKRRRQERERQYRKDKKLQQKEEQLLGEEPEKRRRQE 1002
Query: 483 MEQRQEQEDEIKKLNELIL 539
E++ +E+E+++ E +L
Sbjct: 1003 REKKYREEEELQQEEEQLL 1021
Score = 31.6 bits (70), Expect = 3.0
Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Frame = +3
Query: 285 RARIISSEERIKRDENLKNQKNEEMMASQSRRQEMKRHDIMR-----QKNDKMTDLEEEA 449
R R + +EER +R++ ++ E+ + RR+ K + Q+ ++ L+EE
Sbjct: 812 RERQLRAEERQQREQRFLPEEEEKEQRGRQRREREKELQFLEEEEQLQRRERAQQLQEEE 871
Query: 450 YQKAQTLLKKAMEQRQEQE 506
+ ++ EQR++Q+
Sbjct: 872 DGLQEDQERRRQEQRRDQK 890
Score = 30.8 bits (68), Expect = 5.1
Identities = 17/86 (19%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
Frame = +3
Query: 285 RARIISSEERIKRDENLKNQKNEEMMASQSRRQEMKRHDIMRQKNDKMTDLEEEAYQKAQ 464
R + + E+ +R++ L+ ++ EE RR++ R + ++ ++ E+E ++ Q
Sbjct: 335 REQQLRREQEERREQQLRREQEEE------RREQQLRREQEEERREQQLRREQEEERREQ 388
Query: 465 TLLKKAMEQRQEQ---EDEIKKLNEL 533
L ++ +R++Q E ++++ +L
Sbjct: 389 QLRREQQLRREQQLRREQQLRREQQL 414
Score = 30.0 bits (66), Expect = 8.7
Identities = 24/98 (24%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Frame = +3
Query: 252 LDSDAFNKLRNRARIISSEERIKRDENLKNQKNEE----MMASQSRRQEMKRHDIMRQKN 419
L+ + + + R R E+++ R+E + ++ +E + QE + ++RQ+
Sbjct: 1257 LEREEQKEAKRRDRKSQEEKQLLREEREEKRRRQETDRKFREEEQLLQEREEQPLLRQER 1316
Query: 420 DKMTDLEEEAYQK-AQTLLKKAMEQRQEQEDEIKKLNE 530
D+ EE +Q+ + L++ EQR +E E K L E
Sbjct: 1317 DRKFREEELLHQEQGRKFLEE--EQRLREERERKFLKE 1352
>sp|Q8C1B7|SEP11_MOUSE Septin-11
Length = 431
Score = 40.0 bits (92), Expect = 0.008
Identities = 31/137 (22%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Frame = +3
Query: 138 KNYDNFIPEKEETIRIITKDMVRNLRVpreDPSLKSMVLDSDAFNKLRNRARIISSEERI 317
+N+ +F+ +E IR+ +D+ R R + L+ F ++ S +E
Sbjct: 265 ENHCDFVKLREMLIRVNMEDL-REQTHTRHYELYRRCKLEEMGFKDTDPDSKPFSLQETY 323
Query: 318 KRDENLKNQKNEEMMASQSRRQEMKRHDIMR--QKNDKMTDLEEEAYQKAQTLLKKAMEQ 491
+ ++NE + Q + +EM++ +MR +K ++ + E+E ++K L + E+
Sbjct: 324 EA------KRNEFLGELQKKEEEMRQMFVMRVKEKEAELKEAEKELHEKFDLLKRTHQEE 377
Query: 492 RQEQEDEIKKLNELILN 542
+++ ED+ K+L E + N
Sbjct: 378 KKKVEDKKKELEEEVSN 394
>sp|Q9NVA2|SEP11_HUMAN Septin-11
Length = 429
Score = 39.7 bits (91), Expect = 0.011
Identities = 31/137 (22%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Frame = +3
Query: 138 KNYDNFIPEKEETIRIITKDMVRNLRVpreDPSLKSMVLDSDAFNKLRNRARIISSEERI 317
+N+ +F+ +E IR+ +D+ R R + L+ F ++ S +E
Sbjct: 265 ENHCDFVKLREMLIRVNMEDL-REQTHTRHYELYRRCKLEEMGFKDTDPDSKPFSLQETY 323
Query: 318 KRDENLKNQKNEEMMASQSRRQEMKRHDIMR--QKNDKMTDLEEEAYQKAQTLLKKAMEQ 491
+ ++NE + Q + +EM++ +MR +K ++ + E+E ++K L + E+
Sbjct: 324 EA------KRNEFLGELQKKEEEMRQMFVMRVKEKEAELKEAEKELHEKFDLLKRTHQEE 377
Query: 492 RQEQEDEIKKLNELILN 542
+++ ED+ K+L E + N
Sbjct: 378 KKKVEDKKKELEEEVNN 394
>sp|Q03001|BPA1_HUMAN Bullous pemphigoid antigen 1 isoforms 1/2/3/4/5/8 (230 kDa bullous
pemphigoid antigen) (BPA) (Hemidesmosomal plaque protein)
(Dystonia musculorum protein) (Dystonin)
Length = 3214
Score = 39.7 bits (91), Expect = 0.011
Identities = 34/156 (21%), Positives = 74/156 (47%), Gaps = 18/156 (11%)
Frame = +3
Query: 135 RKNYDNFIPEKEETIRIITKDMVR-NLRVpreDPSLKSMVLDSDAFNKLRNRARIISSEE 311
R+ +N + +++ + I+ +R + L+++V + +A + R R ++ E
Sbjct: 1730 REAAENELRKQQRNVEDISLQKIRAESEAKQYRRELETIVREKEAAERELERVRQLTIEA 1789
Query: 312 RIKR---DENLKNQKNE--------EMMASQSRRQEMKRHDIMRQKNDKMTDL------E 440
KR +ENL N +N+ + +R+++ +D+ +QKN M +L E
Sbjct: 1790 EAKRAAVEENLLNFRNQLEENTFTRRTLEDHLKRKDLSLNDLEQQKNKLMEELRRKRDNE 1849
Query: 441 EEAYQKAQTLLKKAMEQRQEQEDEIKKLNELILNAK 548
EE + + + K Q+Q E ++K+ ++ L A+
Sbjct: 1850 EELLKLIKQMEKDLAFQKQVAEKQLKEKQKIELEAR 1885
>sp|Q8IX21|CJ006_HUMAN Protein C10orf6
Length = 1173
Score = 38.9 bits (89), Expect = 0.019
Identities = 29/107 (27%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
Frame = +3
Query: 228 DPSLKSMVLDSDAFNKLRNRARIISSEERIKR---DENLKNQKNEEMMASQSRRQEMKRH 398
D ++ V ++D FN N +R +SS + R +E+ K + +AS R +E+KR
Sbjct: 196 DSKKQTTVAEADIFN---NSSRSLSSRSSLSRHHPEESPLGAKFQLSLASYCRERELKR- 251
Query: 399 DIMRQKNDKMTDLEEEAYQKAQTL-LKKAMEQRQEQEDEIKKLNELI 536
+R++ + E ++ +A +L LK ++E++ + E +K N++I
Sbjct: 252 --LRKEQMEQRINSENSFSEASSLSLKSSIERKYKPRQEQRKQNDII 296
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,422,245
Number of Sequences: 369166
Number of extensions: 1155234
Number of successful extensions: 5547
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4610
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5299
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8582957970
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)