Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_024_C04
(254 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q04831|GLNA_PANAR Glutamine synthetase (Glutamate--ammon... 132 3e-31
sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (... 119 3e-27
sp|P09606|GLNA_RAT Glutamine synthetase (Glutamate--ammonia... 108 4e-24
sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammon... 107 1e-23
sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammon... 105 3e-23
sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammon... 103 1e-22
sp|P51121|GLNA_XENLA Glutamine synthetase (Glutamate--ammon... 101 6e-22
sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammon... 101 6e-22
sp|P04773|GLNA_CRIGR Glutamine synthetase (Glutamate--ammon... 101 6e-22
sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammon... 100 1e-21
>sp|Q04831|GLNA_PANAR Glutamine synthetase (Glutamate--ammonia ligase)
Length = 361
Score = 132 bits (331), Expect = 3e-31
Identities = 58/81 (71%), Positives = 68/81 (83%)
Frame = +2
Query: 11 NKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTG 190
NK +L RYL L PD++ Q MYIW+DGTGENLRSKTRTLNF P P ++PIWNFDGSSTG
Sbjct: 6 NKTVLDRYLRLDIPDQKCQAMYIWVDGTGENLRSKTRTLNFTPKSPSELPIWNFDGSSTG 65
Query: 191 QAEGSNSDIYLHPVALFNDPF 253
QAE SNSD+YL+PVA++ DPF
Sbjct: 66 QAERSNSDVYLYPVAVYRDPF 86
>sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (Glutamate--ammonia ligase 2)
Length = 369
Score = 119 bits (297), Expect = 3e-27
Identities = 52/83 (62%), Positives = 66/83 (79%)
Frame = +2
Query: 5 RENKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSS 184
R NK +L RYL+LP + VQ Y+WIDGTGE+LR K RTL+F+P PK++P+WN+DGSS
Sbjct: 13 RINKTILDRYLSLPLQENIVQATYVWIDGTGEDLRCKDRTLDFIPQSPKELPVWNYDGSS 72
Query: 185 TGQAEGSNSDIYLHPVALFNDPF 253
QAEGSNSD YL+PVA++ DPF
Sbjct: 73 CYQAEGSNSDTYLYPVAIYKDPF 95
>sp|P09606|GLNA_RAT Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 108 bits (270), Expect = 4e-24
Identities = 51/81 (62%), Positives = 64/81 (79%)
Frame = +2
Query: 11 NKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTG 190
NK + Y+NLP E++Q+MYIW+DGTGE LR KTRTL+ P +++P WNFDGSST
Sbjct: 10 NKGIKQMYMNLPQ-GEKIQLMYIWVDGTGEGLRCKTRTLDCDPKCVEELPEWNFDGSSTF 68
Query: 191 QAEGSNSDIYLHPVALFNDPF 253
Q+EGSNSD+YLHPVA+F DPF
Sbjct: 69 QSEGSNSDMYLHPVAMFRDPF 89
>sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 107 bits (266), Expect = 1e-23
Identities = 51/81 (62%), Positives = 63/81 (77%)
Frame = +2
Query: 11 NKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTG 190
NK + Y++LP E+VQ MYIW+DGTGE LR KTRTL+ P +++P WNFDGSST
Sbjct: 10 NKGIKQMYMSLPQ-GEKVQAMYIWVDGTGEGLRCKTRTLDCEPKCVEELPEWNFDGSSTF 68
Query: 191 QAEGSNSDIYLHPVALFNDPF 253
Q+EGSNSD+YLHPVA+F DPF
Sbjct: 69 QSEGSNSDMYLHPVAMFRDPF 89
>sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 105 bits (262), Expect = 3e-23
Identities = 51/81 (62%), Positives = 61/81 (75%)
Frame = +2
Query: 11 NKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTG 190
+K + Y+ LP E+VQ MYIWIDGTGE+LR KTRTL+ P +D+P WNFDGSST
Sbjct: 10 SKAIKHMYMKLPQ-GEKVQAMYIWIDGTGEHLRCKTRTLDHEPKSLEDLPEWNFDGSSTF 68
Query: 191 QAEGSNSDIYLHPVALFNDPF 253
QAEGSNSD+YL P A+F DPF
Sbjct: 69 QAEGSNSDMYLRPAAMFRDPF 89
>sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 103 bits (257), Expect = 1e-22
Identities = 50/81 (61%), Positives = 62/81 (76%)
Frame = +2
Query: 11 NKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTG 190
NK + Y++LP E+VQ MYIW+DGTGE LR KTRTL+ P +++P WNFDGSST
Sbjct: 10 NKGIKQMYMSLPQ-GEKVQAMYIWVDGTGEGLRCKTRTLDCEPKCVEELPEWNFDGSSTF 68
Query: 191 QAEGSNSDIYLHPVALFNDPF 253
Q+EGSNSD+YL PVA+F DPF
Sbjct: 69 QSEGSNSDMYLSPVAMFRDPF 89
>sp|P51121|GLNA_XENLA Glutamine synthetase (Glutamate--ammonia ligase)
Length = 392
Score = 101 bits (251), Expect = 6e-22
Identities = 50/83 (60%), Positives = 61/83 (73%)
Frame = +2
Query: 5 RENKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSS 184
R NK + +Y+ LP E+VQV Y+WIDGTGE +R KTRTL+ P ++P WNFDGSS
Sbjct: 8 RLNKGVREQYMKLPQ-GEKVQVTYVWIDGTGEGVRCKTRTLDQEPKTIDEIPEWNFDGSS 66
Query: 185 TGQAEGSNSDIYLHPVALFNDPF 253
T QAEGSNSD+YL PV +F DPF
Sbjct: 67 THQAEGSNSDMYLIPVQMFRDPF 89
>sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 101 bits (251), Expect = 6e-22
Identities = 50/81 (61%), Positives = 61/81 (75%)
Frame = +2
Query: 11 NKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTG 190
NK + Y++LP E+VQ MYIWIDGTGE LR KTRTL+ P +++P WNFDGSST
Sbjct: 10 NKGIKQVYMSLPQ-GEKVQAMYIWIDGTGEGLRCKTRTLDSEPKGVEELPEWNFDGSSTF 68
Query: 191 QAEGSNSDIYLHPVALFNDPF 253
Q+EGSNSD+YL P A+F DPF
Sbjct: 69 QSEGSNSDMYLVPAAMFRDPF 89
>sp|P04773|GLNA_CRIGR Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 101 bits (251), Expect = 6e-22
Identities = 49/81 (60%), Positives = 61/81 (75%)
Frame = +2
Query: 11 NKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTG 190
NK + Y++LP E+VQ MYIW+DGTGE LR KTRTL+ P +++P WNFDGSST
Sbjct: 10 NKGIKQMYMSLPQ-GEKVQAMYIWVDGTGEGLRCKTRTLDCEPKCVEELPEWNFDGSSTF 68
Query: 191 QAEGSNSDIYLHPVALFNDPF 253
Q+E SNSD+YL PVA+F DPF
Sbjct: 69 QSESSNSDMYLSPVAMFRDPF 89
>sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 100 bits (249), Expect = 1e-21
Identities = 50/81 (61%), Positives = 61/81 (75%)
Frame = +2
Query: 11 NKLLLTRYLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTG 190
NK + Y++LP E+VQ MYIWIDGTGE LR KTRTL+ P +++P WNFDGSST
Sbjct: 10 NKGIKQVYMSLPQ-GEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCVEELPEWNFDGSSTL 68
Query: 191 QAEGSNSDIYLHPVALFNDPF 253
Q+EGSNSD+YL P A+F DPF
Sbjct: 69 QSEGSNSDMYLVPAAMFRDPF 89
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,016,761
Number of Sequences: 369166
Number of extensions: 483198
Number of successful extensions: 1379
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1369
length of database: 68,354,980
effective HSP length: 55
effective length of database: 58,194,555
effective search space used: 1687642095
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)