Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dr_sW_024_A21-2 (157 letters) Database: Non-redundant SwissProt sequences 184,735 sequences; 68,354,980 total letters Score E Sequences producing significant alignments: (bits) Value sp|Q03792|RIM13_YEAST Calpain-like protease 1 (Cysteine pro... 31 0.78 sp|P22348|PUR6_METSM Probable phosphoribosylaminoimidazole ... 28 8.7
>sp|Q03792|RIM13_YEAST Calpain-like protease 1 (Cysteine protease RIM13) (Calpain-7) (Regulator of IME2 protein 13) Length = 727 Score = 31.2 bits (69), Expect = 0.78 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = -1 Query: 142 CSIKTGNNFSRYIFTV*KSSCYIGITSTNSLFGNV 38 C T NNFS + F+V K C+ + T SLF V Sbjct: 423 CYSTTNNNFSIHSFSVVKEICFQRLKDTKSLFAKV 457
>sp|P22348|PUR6_METSM Probable phosphoribosylaminoimidazole carboxylase (AIR carboxylase) (AIRC) Length = 339 Score = 27.7 bits (60), Expect = 8.7 Identities = 11/30 (36%), Positives = 18/30 (60%) Frame = -1 Query: 142 CSIKTGNNFSRYIFTV*KSSCYIGITSTNS 53 C I++G F Y+ T+ + +IGI S +S Sbjct: 230 CPIRSGKKFRAYVNTMKNAKIFIGINSNSS 259
Database: Non-redundant SwissProt sequences Posted date: Dec 6, 2005 7:40 AM Number of letters in database: 68,354,980 Number of sequences in database: 184,735 Database: swissprot.01 Posted date: Dec 6, 2005 8:18 AM Number of letters in database: 66,202,850 Number of sequences in database: 184,431 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,195,916 Number of Sequences: 369166 Number of extensions: 301768 Number of successful extensions: 815 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 806 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 815 length of database: 68,354,980 effective HSP length: 24 effective length of database: 63,921,340 effective search space used: 1725876180 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)