Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_023_K19
(754 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P07688|CATB_BOVIN Cathepsin B precursor [Contains: Cathe... 317 2e-86
sp|P07858|CATB_HUMAN Cathepsin B precursor (Cathepsin B1) (... 308 1e-83
sp|P10605|CATB_MOUSE Cathepsin B precursor (Cathepsin B1) [... 305 9e-83
sp|P00787|CATB_RAT Cathepsin B precursor (Cathepsin B1) (RS... 303 2e-82
sp|P43233|CATB_CHICK Cathepsin B precursor (Cathepsin B1) [... 294 2e-79
sp|P43157|CYSP_SCHJA Cathepsin B-like cysteine proteinase p... 284 2e-76
sp|P25792|CYSP_SCHMA Cathepsin B-like cysteine proteinase p... 265 1e-70
sp|P43510|CPR6_CAEEL Cathepsin B-like cysteine proteinase 6... 243 5e-64
sp|P25807|CPR1_CAEEL Gut-specific cysteine proteinase precu... 239 4e-63
sp|P43509|CPR5_CAEEL Cathepsin B-like cysteine proteinase 5... 234 1e-61
>sp|P07688|CATB_BOVIN Cathepsin B precursor [Contains: Cathepsin B light chain; Cathepsin
B heavy chain]
Length = 335
Score = 317 bits (813), Expect = 2e-86
Identities = 146/239 (61%), Positives = 173/239 (72%)
Frame = +3
Query: 15 KLPKRKPLLNRVRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSN 194
KLP+R V LP +FDAR QWP C +I EIRDQ +CGSCWAFGAVEAI+DR CIHSN
Sbjct: 67 KLPQRDAFAADVVLPESFDAREQWPNCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHSN 126
Query: 195 GTQTPRISAEDLLTCCGFRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFPK 374
G +SAED+LTCCG CGDGCNGGFPSGAW++W GLV+GG Y +H+GC+ Y+ P
Sbjct: 127 GRVNVEVSAEDMLTCCGGECGDGCNGGFPSGAWNFWTKKGLVSGGLYNSHVGCRPYSIPP 186
Query: 375 CSHHVIGPYPNCTGEFPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEILTN 554
C HHV G P CTGE TPKC K C+ GYS +Y EDK +G SSYSV +N++ IM EI N
Sbjct: 187 CEHHVNGSRPPCTGEGDTPKCNKTCEPGYSPSYKEDKHFGCSSYSVANNEKEIMAEIYKN 246
Query: 555 GPVEAAFSVYADFPNYKSGVYQHVTGGMLGGHAIKILGLGCRKQHPILVGG*FMESDLG 731
GPVE AFSVY+DF YKSGVYQHV+G ++GGHAI+ILG G P + G +D G
Sbjct: 247 GPVEGAFSVYSDFLLYKSGVYQHVSGEIMGGHAIRILGWGVENGTPYWLVGNSWNTDWG 305
Score = 67.4 bits (163), Expect = 4e-11
Identities = 26/32 (81%), Positives = 27/32 (84%)
Frame = +1
Query: 658 RFLGWGVENNTPYWLVANSWNPTWGDNGYFKI 753
R LGWGVEN TPYWLV NSWN WGDNG+FKI
Sbjct: 281 RILGWGVENGTPYWLVGNSWNTDWGDNGFFKI 312
>sp|P07858|CATB_HUMAN Cathepsin B precursor (Cathepsin B1) (APP secretase) (APPS)
[Contains: Cathepsin B light chain; Cathepsin B heavy
chain]
Length = 339
Score = 308 bits (788), Expect = 1e-83
Identities = 138/226 (61%), Positives = 168/226 (74%)
Frame = +3
Query: 15 KLPKRKPLLNRVRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSN 194
K P+R ++LP +FDAR QWP+C +I EIRDQ +CGSCWAFGAVEAI+DR CIH+N
Sbjct: 67 KPPQRVMFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTN 126
Query: 195 GTQTPRISAEDLLTCCGFRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFPK 374
+ +SAEDLLTCCG CGDGCNGG+P+ AW++W GLV+GG Y +H+GC+ Y+ P
Sbjct: 127 AHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIPP 186
Query: 375 CSHHVIGPYPNCTGEFPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEILTN 554
C HHV G P CTGE TPKC K C+ GYS TY +DK YG +SYSV ++++ IM EI N
Sbjct: 187 CEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKN 246
Query: 555 GPVEAAFSVYADFPNYKSGVYQHVTGGMLGGHAIKILGLGCRKQHP 692
GPVE AFSVY+DF YKSGVYQHVTG M+GGHAI+ILG G P
Sbjct: 247 GPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTP 292
Score = 68.9 bits (167), Expect = 1e-11
Identities = 27/32 (84%), Positives = 28/32 (87%)
Frame = +1
Query: 658 RFLGWGVENNTPYWLVANSWNPTWGDNGYFKI 753
R LGWGVEN TPYWLVANSWN WGDNG+FKI
Sbjct: 281 RILGWGVENGTPYWLVANSWNTDWGDNGFFKI 312
>sp|P10605|CATB_MOUSE Cathepsin B precursor (Cathepsin B1) [Contains: Cathepsin B light
chain; Cathepsin B heavy chain]
Length = 339
Score = 305 bits (781), Expect = 9e-83
Identities = 136/226 (60%), Positives = 164/226 (72%)
Frame = +3
Query: 15 KLPKRKPLLNRVRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSN 194
KLP R + LP TFDAR QW C +IG+IRDQ +CGSCWAFGAVEAI+DR CIH+N
Sbjct: 67 KLPGRVAFGEDIDLPETFDAREQWSNCPTIGQIRDQGSCGSCWAFGAVEAISDRTCIHTN 126
Query: 195 GTQTPRISAEDLLTCCGFRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFPK 374
G +SAEDLLTCCG +CGDGCNGG+PSGAW +W GLV+GG Y +H+GC Y P
Sbjct: 127 GRVNVEVSAEDLLTCCGIQCGDGCNGGYPSGAWSFWTKKGLVSGGVYNSHVGCLPYTIPP 186
Query: 375 CSHHVIGPYPNCTGEFPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEILTN 554
C HHV G P CTGE TP+C K+C+AGYS +Y EDK +G +SYSV ++ + IM EI N
Sbjct: 187 CEHHVNGSRPPCTGEGDTPRCNKSCEAGYSPSYKEDKHFGYTSYSVSNSVKEIMAEIYKN 246
Query: 555 GPVEAAFSVYADFPNYKSGVYQHVTGGMLGGHAIKILGLGCRKQHP 692
GPVE AF+V++DF YKSGVY+H G M+GGHAI+ILG G P
Sbjct: 247 GPVEGAFTVFSDFLTYKSGVYKHEAGDMMGGHAIRILGWGVENGVP 292
Score = 64.7 bits (156), Expect = 3e-10
Identities = 25/32 (78%), Positives = 26/32 (81%)
Frame = +1
Query: 658 RFLGWGVENNTPYWLVANSWNPTWGDNGYFKI 753
R LGWGVEN PYWL ANSWN WGDNG+FKI
Sbjct: 281 RILGWGVENGVPYWLAANSWNLDWGDNGFFKI 312
>sp|P00787|CATB_RAT Cathepsin B precursor (Cathepsin B1) (RSG-2) [Contains: Cathepsin B
light chain; Cathepsin B heavy chain]
Length = 339
Score = 303 bits (777), Expect = 2e-82
Identities = 133/225 (59%), Positives = 163/225 (72%)
Frame = +3
Query: 18 LPKRKPLLNRVRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSNG 197
LP+R + LP +FDAR QW C +I +IRDQ +CGSCWAFGAVEA++DR CIH+NG
Sbjct: 68 LPERVGFSEDINLPESFDAREQWSNCPTIAQIRDQGSCGSCWAFGAVEAMSDRICIHTNG 127
Query: 198 TQTPRISAEDLLTCCGFRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFPKC 377
+SAEDLLTCCG +CGDGCNGG+PSGAW++W GLV+GG Y +H+GC Y P C
Sbjct: 128 RVNVEVSAEDLLTCCGIQCGDGCNGGYPSGAWNFWTRKGLVSGGVYNSHIGCLPYTIPPC 187
Query: 378 SHHVIGPYPNCTGEFPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEILTNG 557
HHV G P CTGE TPKC K C+AGYS +Y EDK YG +SYSV +++ IM EI NG
Sbjct: 188 EHHVNGSRPPCTGEGDTPKCNKMCEAGYSTSYKEDKHYGYTSYSVSDSEKEIMAEIYKNG 247
Query: 558 PVEAAFSVYADFPNYKSGVYQHVTGGMLGGHAIKILGLGCRKQHP 692
PVE AF+V++DF YKSGVY+H G ++GGHAI+ILG G P
Sbjct: 248 PVEGAFTVFSDFLTYKSGVYKHEAGDVMGGHAIRILGWGIENGVP 292
Score = 66.2 bits (160), Expect = 9e-11
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = +1
Query: 658 RFLGWGVENNTPYWLVANSWNPTWGDNGYFKI 753
R LGWG+EN PYWLVANSWN WGDNG+FKI
Sbjct: 281 RILGWGIENGVPYWLVANSWNVDWGDNGFFKI 312
>sp|P43233|CATB_CHICK Cathepsin B precursor (Cathepsin B1) [Contains: Cathepsin B light
chain; Cathepsin B heavy chain]
Length = 340
Score = 294 bits (753), Expect = 2e-79
Identities = 135/240 (56%), Positives = 163/240 (67%), Gaps = 1/240 (0%)
Frame = +3
Query: 15 KLPKRKPLLNRVRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSN 194
K P+R + LP TFD R QWP C +I EIRDQ +CGSCWAFGAVEAI+DR C+H+N
Sbjct: 67 KAPERVDFAEDMDLPDTFDTRKQWPNCPTISEIRDQGSCGSCWAFGAVEAISDRICVHTN 126
Query: 195 GTQTPRISAEDLLTCCGFRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFPK 374
+ +SAEDLL+CCGF CG GCNGG+PSGAW YW GLV+GG Y +H+GC+ Y P
Sbjct: 127 AKVSVEVSAEDLLSCCGFECGMGCNGGYPSGAWRYWTERGLVSGGLYDSHVGCRAYTIPP 186
Query: 375 CSHHVIGPYPNCTGE-FPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEILT 551
C HHV G P CTGE TP+C + C+ GYS +Y EDK YG +SY V +++ IM EI
Sbjct: 187 CEHHVNGSRPPCTGEGGETPRCSRHCEPGYSPSYKEDKHYGITSYGVPRSEKEIMAEIYK 246
Query: 552 NGPVEAAFSVYADFPNYKSGVYQHVTGGMLGGHAIKILGLGCRKQHPILVGG*FMESDLG 731
NGPVE AF VY DF YKSGVYQHV+G +GGHAI+ILG G P + +D G
Sbjct: 247 NGPVEGAFIVYEDFLMYKSGVYQHVSGEQVGGHAIRILGWGVENGTPYWLAANSWNTDWG 306
Score = 61.6 bits (148), Expect = 2e-09
Identities = 24/32 (75%), Positives = 25/32 (78%)
Frame = +1
Query: 658 RFLGWGVENNTPYWLVANSWNPTWGDNGYFKI 753
R LGWGVEN TPYWL ANSWN WG G+FKI
Sbjct: 282 RILGWGVENGTPYWLAANSWNTDWGITGFFKI 313
>sp|P43157|CYSP_SCHJA Cathepsin B-like cysteine proteinase precursor (Antigen Sj31)
Length = 342
Score = 284 bits (727), Expect = 2e-76
Identities = 127/216 (58%), Positives = 156/216 (72%), Gaps = 1/216 (0%)
Frame = +3
Query: 48 VRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSNGTQTPRISAED 227
V +P+ FD+R +WP CKSI +IRDQS CGSCWAFGAVEA+TDR CI S G Q+ +SA D
Sbjct: 88 VEIPSQFDSRKKWPHCKSISQIRDQSRCGSCWAFGAVEAMTDRICIQSGGGQSAELSALD 147
Query: 228 LLTCCGFRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFPKCSHHVIGPYPN 407
L++CC CGDGC GGFP AW YWV G+VTGG H GCQ Y FPKC HH G YP
Sbjct: 148 LISCCK-DCGDGCQGGFPGVAWDYWVKRGIVTGGSKENHTGCQPYPFPKCEHHTKGKYPA 206
Query: 408 C-TGEFPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEILTNGPVEAAFSVY 584
C T + TP+CK+ CQ GY Y +DK YG SY+V +N++ I ++I+ GPVEAAF VY
Sbjct: 207 CGTKIYKTPQCKQTCQKGYKTPYEQDKHYGDESYNVQNNEKVIQRDIMMYGPVEAAFDVY 266
Query: 585 ADFPNYKSGVYQHVTGGMLGGHAIKILGLGCRKQHP 692
DF NYKSG+Y+HVTG ++GGHAI+I+G G K+ P
Sbjct: 267 EDFLNYKSGIYRHVTGSIVGGHAIRIIGWGVEKRTP 302
Score = 57.8 bits (138), Expect = 3e-08
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = +1
Query: 658 RFLGWGVENNTPYWLVANSWNPTWGDNGYFKI 753
R +GWGVE TPYWL+ANSWN WG+ G F++
Sbjct: 291 RIIGWGVEKRTPYWLIANSWNEDWGEKGLFRM 322
>sp|P25792|CYSP_SCHMA Cathepsin B-like cysteine proteinase precursor (Antigen Sm31)
Length = 340
Score = 265 bits (677), Expect = 1e-70
Identities = 122/228 (53%), Positives = 156/228 (68%), Gaps = 5/228 (2%)
Frame = +3
Query: 24 KRKPLLNR----VRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHS 191
KR+P ++ V +P+ FD+R +WP CKSI IRDQS CGSCW+FGAVEA++DR CI S
Sbjct: 75 KRRPTVDHNDWNVEIPSNFDSRKKWPGCKSIATIRDQSRCGSCWSFGAVEAMSDRSCIQS 134
Query: 192 NGTQTPRISAEDLLTCCGFRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFP 371
G Q +SA DLLTCC CG GC GG AW YWV +G+VT H GC+ Y FP
Sbjct: 135 GGKQNVELSAVDLLTCCE-SCGLGCEGGILGPAWDYWVKEGIVTASSKENHTGCEPYPFP 193
Query: 372 KCSHHVIGPYPNCTGE-FPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEIL 548
KC HH G YP C + + TP+CK+ CQ Y Y +DK GKSSY+V ++++AI +EI+
Sbjct: 194 KCEHHTKGKYPPCGSKIYNTPRCKQTCQRKYKTPYTQDKHRGKSSYNVKNDEKAIQKEIM 253
Query: 549 TNGPVEAAFSVYADFPNYKSGVYQHVTGGMLGGHAIKILGLGCRKQHP 692
GPVEA+F+VY DF NYKSG+Y+H+TG LGGHAI+I+G G + P
Sbjct: 254 KYGPVEASFTVYEDFLNYKSGIYKHITGEALGGHAIRIIGWGVENKTP 301
Score = 66.6 bits (161), Expect = 7e-11
Identities = 24/32 (75%), Positives = 28/32 (87%)
Frame = +1
Query: 658 RFLGWGVENNTPYWLVANSWNPTWGDNGYFKI 753
R +GWGVEN TPYWL+ANSWN WG+NGYF+I
Sbjct: 290 RIIGWGVENKTPYWLIANSWNEDWGENGYFRI 321
>sp|P43510|CPR6_CAEEL Cathepsin B-like cysteine proteinase 6 precursor (Cysteine
protease-related 6)
Length = 379
Score = 243 bits (619), Expect = 5e-64
Identities = 115/212 (54%), Positives = 147/212 (69%), Gaps = 5/212 (2%)
Frame = +3
Query: 54 LPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSNGTQTPRISAEDLL 233
+P +FD+R WPKC SI IRDQS+CGSCWAFGAVEA++DR CI S+G +SA+DLL
Sbjct: 105 IPESFDSRDNWPKCDSIKVIRDQSSCGSCWAFGAVEAMSDRICIASHGELQVTLSADDLL 164
Query: 234 TCCGFRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFPKCSHHV----IGPY 401
+CC CG GCNGG P AW YWV DG+VTG Y A+ GC+ Y FP C HH P
Sbjct: 165 SCCK-SCGFGCNGGDPLAAWRYWVKDGIVTGSNYTANNGCKPYPFPPCEHHSKKTHFDPC 223
Query: 402 PNCTGEFPTPKCKKACQAGYS-KTYAEDKQYGKSSYSVDSNQQAIMQEILTNGPVEAAFS 578
P+ +PTPKC+K C + Y+ KTY+EDK +G S+Y V + +AI +E++T+GP+E AF
Sbjct: 224 PH--DLYPTPKCEKKCVSDYTDKTYSEDKFFGASAYGVKDDVEAIQKELMTHGPLEIAFE 281
Query: 579 VYADFPNYKSGVYQHVTGGMLGGHAIKILGLG 674
VY DF NY GVY H G + GGHA+K++G G
Sbjct: 282 VYEDFLNYDGGVYVHTGGKLGGGHAVKLIGWG 313
Score = 54.7 bits (130), Expect = 3e-07
Identities = 17/32 (53%), Positives = 26/32 (81%)
Frame = +1
Query: 658 RFLGWGVENNTPYWLVANSWNPTWGDNGYFKI 753
+ +GWG+++ PYW VANSWN WG++G+F+I
Sbjct: 308 KLIGWGIDDGIPYWTVANSWNTDWGEDGFFRI 339
>sp|P25807|CPR1_CAEEL Gut-specific cysteine proteinase precursor
Length = 329
Score = 239 bits (611), Expect = 4e-63
Identities = 115/213 (53%), Positives = 140/213 (65%)
Frame = +3
Query: 54 LPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSNGTQTPRISAEDLL 233
+P TFD+R QW +CKSI IRDQ+ CGSCWAFGA E I+DR CI + G Q P IS +DLL
Sbjct: 85 VPATFDSRTQWSECKSIKLIRDQATCGSCWAFGAAEMISDRTCIETKGAQQPIISPDDLL 144
Query: 234 TCCGFRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFPKCSHHVIGPYPNCT 413
+CCG CG+GC GG+P A +W + G+VTGG+Y GC+ Y C+ NC
Sbjct: 145 SCCGSSCGNGCEGGYPIQALRWWDSKGVVTGGDYHG-AGCKPYPIAPCTS------GNCP 197
Query: 414 GEFPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEILTNGPVEAAFSVYADF 593
E TP C +CQ+GYS YA+DK +G S+Y+V N +I EI NGPVEAAFSVY DF
Sbjct: 198 -ESKTPSCSMSCQSGYSTAYAKDKHFGVSAYAVPKNAASIQAEIYANGPVEAAFSVYEDF 256
Query: 594 PNYKSGVYQHVTGGMLGGHAIKILGLGCRKQHP 692
YKSGVY+H G LGGHAIKI+G G P
Sbjct: 257 YKYKSGVYKHTAGKYLGGHAIKIIGWGTESGSP 289
Score = 56.2 bits (134), Expect = 9e-08
Identities = 19/32 (59%), Positives = 26/32 (81%)
Frame = +1
Query: 658 RFLGWGVENNTPYWLVANSWNPTWGDNGYFKI 753
+ +GWG E+ +PYWLVANSW WG++G+FKI
Sbjct: 278 KIIGWGTESGSPYWLVANSWGVNWGESGFFKI 309
>sp|P43509|CPR5_CAEEL Cathepsin B-like cysteine proteinase 5 precursor (Cysteine
protease-related 5)
Length = 344
Score = 234 bits (598), Expect = 1e-61
Identities = 112/213 (52%), Positives = 138/213 (64%), Gaps = 6/213 (2%)
Frame = +3
Query: 54 LPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSNGTQTPRISAEDLL 233
+P FDAR QWP C SI IRDQS+CGSCWAF A EAI+DR CI SNG +S+EDLL
Sbjct: 82 IPDHFDARDQWPNCMSINNIRDQSDCGSCWAFAAAEAISDRTCIASNGAVNTLLSSEDLL 141
Query: 234 TCCG--FRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFPKCSHHVIG-PYP 404
+CC F CG+GC GG+P AW +WV GLVTGG Y GC+ Y+ C V G +P
Sbjct: 142 SCCTGMFSCGNGCEGGYPIQAWKWWVKHGLVTGGSYETQFGCKPYSIAPCGETVNGVKWP 201
Query: 405 NCTGEF-PTPKCKKACQA--GYSKTYAEDKQYGKSSYSVDSNQQAIMQEILTNGPVEAAF 575
C + PTPKC +C + Y+ Y +DK +G ++Y+V + I EILTNGP+E AF
Sbjct: 202 ACPEDTEPTPKCVDSCTSKNNYATPYLQDKHFGSTAYAVGKKVEQIQTEILTNGPIEVAF 261
Query: 576 SVYADFPNYKSGVYQHVTGGMLGGHAIKILGLG 674
+VY DF Y +GVY H G LGGHA+KILG G
Sbjct: 262 TVYEDFYQYTTGVYVHTAGASLGGHAVKILGWG 294
Score = 63.2 bits (152), Expect = 7e-10
Identities = 23/32 (71%), Positives = 27/32 (84%)
Frame = +1
Query: 658 RFLGWGVENNTPYWLVANSWNPTWGDNGYFKI 753
+ LGWGV+N TPYWLVANSWN WG+ GYF+I
Sbjct: 289 KILGWGVDNGTPYWLVANSWNVAWGEKGYFRI 320
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,733,280
Number of Sequences: 369166
Number of extensions: 2181267
Number of successful extensions: 6558
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6386
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6873311200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)