Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_023_K03
(821 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P29190|PPCK_HAECO Phosphoenolpyruvate carboxykinase [GTP... 394 e-109
sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP... 372 e-103
sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mi... 364 e-100
sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mi... 361 2e-99
sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cyto... 349 5e-96
sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cy... 347 2e-95
sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP... 337 2e-92
sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cy... 336 4e-92
sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cy... 336 4e-92
sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cy... 335 7e-92
>sp|P29190|PPCK_HAECO Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 619
Score = 394 bits (1012), Expect = e-109
Identities = 181/276 (65%), Positives = 220/276 (79%), Gaps = 3/276 (1%)
Frame = +2
Query: 2 GFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWEGLEDEV-DKNLEITSWLGV 178
GFFGVAPGT+ KTNP A+ TFQKNSIFTNV ET++G Y+WEGLEDE+ DKN+++ +WLG
Sbjct: 326 GFFGVAPGTSKKTNPMAVATFQKNSIFTNVGETANGEYFWEGLEDEIKDKNVDMINWLGE 385
Query: 179 KMKVGDKSKGLAAHANSRFCCPASQCPIIHPKWEDPKGVPISAIVFGGRRPEGIPLIMQA 358
K ++GD GL AH NSRF PASQCPIIHP+WE PKGVPI AI+FGGRRP G+PL+ +
Sbjct: 386 KWRIGDP--GLCAHPNSRFAAPASQCPIIHPEWESPKGVPIDAIIFGGRRPAGVPLVFET 443
Query: 359 FNWKHGVMLGASLKSEATAAAEFKGKQIMHDPMAMRPFMGYNFGKYLQHWLDLEKPGRKM 538
+W HG+ GA LKSEATAAAE KGK +MHDPMAMRPFMGYNFG YLQHW+DL K GRK+
Sbjct: 444 RSWLHGIFTGACLKSEATAAAEHKGKTVMHDPMAMRPFMGYNFGHYLQHWIDLNKDGRKV 503
Query: 539 PLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRVNGE-DIAEPSPIGLLPKHGTINVT 715
P I+HVNWFR + KF+WPG+G+NIRVIDW+ RR++GE DI +PIG++PK G IN +
Sbjct: 504 PKIYHVNWFRRDANNKFLWPGYGQNIRVIDWIVRRLDGEPDIGVDTPIGIVPKKGAINAS 563
Query: 716 GL-DAKWDEMFSLPKAYLSEDVQETMKFLREQTGED 820
GL D +WDE+ S+PK Y + D +E KFL EQ G D
Sbjct: 564 GLPDIQWDELMSVPKEYWTNDAKEIRKFLEEQVGPD 599
>sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 643
Score = 372 bits (956), Expect = e-103
Identities = 171/276 (61%), Positives = 217/276 (78%), Gaps = 3/276 (1%)
Frame = +2
Query: 2 GFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWEGLEDEV-DKNLEITSWLGV 178
GFFGVAPGT++KTNP AM +FQ+N+IFTNVAET+DG Y+WEGLE EV + +++ +WLG
Sbjct: 349 GFFGVAPGTSHKTNPMAMASFQENTIFTNVAETADGEYFWEGLEHEVKNPKVDMINWLGE 408
Query: 179 KMKVGDKSKGLAAHANSRFCCPASQCPIIHPKWEDPKGVPISAIVFGGRRPEGIPLIMQA 358
+GD+SK AAH NSRF PA QCPIIHP WE P+GVPI AI+FGGRRPEG+PL+ ++
Sbjct: 409 PWHIGDESK--AAHPNSRFTAPAGQCPIIHPDWEKPEGVPIDAIIFGGRRPEGVPLVFES 466
Query: 359 FNWKHGVMLGASLKSEATAAAEFKGKQIMHDPMAMRPFMGYNFGKYLQHWLDLEKPGRKM 538
+W HG+ +GA +KSEATAAAE GKQ+MHDPMAMRPFMGYNFG+Y++HW+ L +P K+
Sbjct: 467 RSWVHGIFVGACVKSEATAAAEHTGKQVMHDPMAMRPFMGYNFGRYMRHWMKLGQPPHKV 526
Query: 539 PLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRVNGE-DIAEPSPIGLLPKHGTINVT 715
P IFHVNWFR + KF+WPG+G+NIRVIDW+ RR +G+ IAE +PIG +PK GTIN+
Sbjct: 527 PKIFHVNWFRQSADHKFLWPGYGDNIRVIDWILRRCSGDATIAEETPIGFIPKKGTINLE 586
Query: 716 GL-DAKWDEMFSLPKAYLSEDVQETMKFLREQTGED 820
GL + WDE+ S+PK+Y ED+ ET F Q G D
Sbjct: 587 GLPNVNWDELMSIPKSYWLEDMVETKTFFENQVGSD 622
>sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 364 bits (935), Expect = e-100
Identities = 162/275 (58%), Positives = 213/275 (77%), Gaps = 2/275 (0%)
Frame = +2
Query: 2 GFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWEGLEDEVDKNLEITSWLGVK 181
GFFGVAPGT+ TNPNAM T Q N++FTNVAETSDG YWEG++ + + ITSWLG
Sbjct: 349 GFFGVAPGTSAATNPNAMATIQSNTLFTNVAETSDGGVYWEGIDQPLPPGVTITSWLGKP 408
Query: 182 MKVGDKSKGLAAHANSRFCCPASQCPIIHPKWEDPKGVPISAIVFGGRRPEGIPLIMQAF 361
K GDK AH NSRFC PA QCPI+ P WE P+GVPI AI+FGGRRP+G+PL+ +AF
Sbjct: 409 WKPGDKEP--CAHPNSRFCVPARQCPIMDPAWEAPEGVPIDAIIFGGRRPKGVPLVYEAF 466
Query: 362 NWKHGVMLGASLKSEATAAAEFKGKQIMHDPMAMRPFMGYNFGKYLQHWLDLE-KPGRKM 538
NW+HGV +G++++SE+TAAAE KGK IMHDP AMRPF GYNFG+YL+HWL +E + G ++
Sbjct: 467 NWRHGVFVGSAMRSESTAAAEHKGKTIMHDPFAMRPFFGYNFGRYLEHWLSMEGQKGARL 526
Query: 539 PLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRVNGEDIAEPSPIGLLPKHGTINVTG 718
P IFHVNWFR ++ G+F+WPGFGEN RV+DW+CRR+ GED A+ +PIGL+PK G ++++G
Sbjct: 527 PRIFHVNWFRRDEAGRFLWPGFGENARVLDWICRRLEGEDSAQETPIGLVPKEGALDLSG 586
Query: 719 LDA-KWDEMFSLPKAYLSEDVQETMKFLREQTGED 820
L A ++FS+PK + ++V++ +L EQ +D
Sbjct: 587 LSAVDTSQLFSIPKDFWEQEVRDIRGYLTEQVNQD 621
>sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 361 bits (926), Expect = 2e-99
Identities = 163/275 (59%), Positives = 209/275 (76%), Gaps = 2/275 (0%)
Frame = +2
Query: 2 GFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWEGLEDEVDKNLEITSWLGVK 181
GFFGVAPGT+ TNPNAM T Q N+IFTNVAETSDG YWEG++ + + +TSWLG
Sbjct: 349 GFFGVAPGTSATTNPNAMATIQSNTIFTNVAETSDGGVYWEGIDQPLPPGVTVTSWLGKP 408
Query: 182 MKVGDKSKGLAAHANSRFCCPASQCPIIHPKWEDPKGVPISAIVFGGRRPEGIPLIMQAF 361
K GDK AH NSRFC PA QCPI+ P WE P+GVPI AI+FGGRRP+G+PL+ +AF
Sbjct: 409 WKPGDKEP--CAHPNSRFCAPARQCPIMDPAWEAPEGVPIDAIIFGGRRPKGVPLVYEAF 466
Query: 362 NWKHGVMLGASLKSEATAAAEFKGKQIMHDPMAMRPFMGYNFGKYLQHWLDLE-KPGRKM 538
NW+HGV +G +++SE+TAAAE KGK IMHDP AMRPF GYNFG YL+HWL +E + G ++
Sbjct: 467 NWRHGVFVGRAMRSESTAAAEHKGKIIMHDPFAMRPFFGYNFGHYLEHWLSMEGRKGAQL 526
Query: 539 PLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRVNGEDIAEPSPIGLLPKHGTINVTG 718
P IFHVNWFR ++ G F+WPGFGEN RV+DW+CRR+ GED A +PIGL+PK G ++++G
Sbjct: 527 PRIFHVNWFRRDEAGHFLWPGFGENARVLDWICRRLEGEDSARETPIGLVPKEGALDLSG 586
Query: 719 LDA-KWDEMFSLPKAYLSEDVQETMKFLREQTGED 820
L A ++FSLPK + ++V++ +L EQ +D
Sbjct: 587 LRAIDTTQLFSLPKDFWEQEVRDIRSYLTEQVNQD 621
>sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 349 bits (896), Expect = 5e-96
Identities = 160/275 (58%), Positives = 204/275 (74%), Gaps = 2/275 (0%)
Frame = +2
Query: 2 GFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWEGLEDEVDKNLEITSWLGVK 181
GFFGVAPGT+ KTNPNA+KT QKN+IFTNVAETSDG YWEG+++ + + ITSW +
Sbjct: 331 GFFGVAPGTSVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGIDEPLAPGVTITSWKNKE 390
Query: 182 MKVGDKSKGLAAHANSRFCCPASQCPIIHPKWEDPKGVPISAIVFGGRRPEGIPLIMQAF 361
+ D+ AH NSRFC PASQCPII P WE P+GVPI I+FGGRRP G+PL+ +A
Sbjct: 391 WRPQDEEP--CAHPNSRFCTPASQCPIIDPAWESPEGVPIEGIIFGGRRPAGVPLVYEAL 448
Query: 362 NWKHGVMLGASLKSEATAAAEFKGKQIMHDPMAMRPFMGYNFGKYLQHWLDL-EKPGRKM 538
+W+HGV +GA+++SEATAAAE KGK IMHDP AMRPF GYNFGKYL HWL + +P K+
Sbjct: 449 SWQHGVFVGAAMRSEATAAAEHKGKVIMHDPFAMRPFFGYNFGKYLAHWLSMAHRPAAKL 508
Query: 539 PLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRVNGEDIAEPSPIGLLPKHGTINVTG 718
P IFHVNWFR + GKF+WPGFGEN RV++WM R+ GED A+ +PIG +PK +N+ G
Sbjct: 509 PKIFHVNWFRKDKNGKFLWPGFGENSRVLEWMFGRIEGEDSAKLTPIGYVPKEDALNLKG 568
Query: 719 L-DAKWDEMFSLPKAYLSEDVQETMKFLREQTGED 820
L D +E+F + K + ++V+E K+L +Q D
Sbjct: 569 LGDVNVEELFGISKEFWEKEVEEIDKYLEDQVNAD 603
>sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 347 bits (890), Expect = 2e-95
Identities = 159/275 (57%), Positives = 203/275 (73%), Gaps = 2/275 (0%)
Frame = +2
Query: 2 GFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWEGLEDEVDKNLEITSWLGVK 181
GFFGVAPGT+ KTNPNA+KT QKN+IFTNVAETSDG YWEG+++ + + ITSW +
Sbjct: 331 GFFGVAPGTSVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGIDEPLAPGVTITSWKNKE 390
Query: 182 MKVGDKSKGLAAHANSRFCCPASQCPIIHPKWEDPKGVPISAIVFGGRRPEGIPLIMQAF 361
+ D AH NSRFC PASQCPII P WE P+GVPI I+FGGRRPEG+PL+ +A
Sbjct: 391 WRPQDAEP--CAHPNSRFCTPASQCPIIDPAWESPEGVPIEGIIFGGRRPEGVPLVYEAL 448
Query: 362 NWKHGVMLGASLKSEATAAAEFKGKQIMHDPMAMRPFMGYNFGKYLQHWLDL-EKPGRKM 538
+W+HGV +GA+++SEATAAAE KGK IMHDP AMRPF GYNFGKYL HWL + +P K+
Sbjct: 449 SWQHGVFVGAAMRSEATAAAEHKGKIIMHDPFAMRPFFGYNFGKYLAHWLSMAHRPAAKL 508
Query: 539 PLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRVNGEDIAEPSPIGLLPKHGTINVTG 718
P IFHVNWFR + GKF+WPGFGEN RV++WM R+ GED A+ +PIG +PK +N+ G
Sbjct: 509 PKIFHVNWFRKDKDGKFLWPGFGENSRVLEWMFGRIEGEDSAKLTPIGYIPKENALNLKG 568
Query: 719 L-DAKWDEMFSLPKAYLSEDVQETMKFLREQTGED 820
L +E+F + K + ++V+E ++L +Q D
Sbjct: 569 LGGVNVEELFGISKEFWEKEVEEIDRYLEDQVNTD 603
>sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 647
Score = 337 bits (864), Expect = 2e-92
Identities = 162/276 (58%), Positives = 202/276 (73%), Gaps = 3/276 (1%)
Frame = +2
Query: 2 GFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWEGLEDEVDKNLEITSWLGVK 181
GFFGVAPGT+ +TNP AM T KN+IFTNVA TSDG +WEG+E + N++IT WLG
Sbjct: 357 GFFGVAPGTSMETNPIAMNTVFKNTIFTNVASTSDGGVFWEGMESSLAPNVQITDWLG-- 414
Query: 182 MKVGDKSKGL-AAHANSRFCCPASQCPIIHPKWEDPKGVPISAIVFGGRRPEGIPLIMQA 358
K K G AAH NSRFC PA+QCPII WEDP GVPISA++FGGRRP G+PLI +A
Sbjct: 415 -KPWTKDSGKPAAHPNSRFCTPAAQCPIIDEAWEDPAGVPISAMLFGGRRPAGVPLIYEA 473
Query: 359 FNWKHGVMLGASLKSEATAAAEFKGKQIMHDPMAMRPFMGYNFGKYLQHWLDLEKPGRKM 538
+W HGV +GA+++SEATAAAE KGK IMHDP AMRPF GYNFG Y+ HWL +EK G ++
Sbjct: 474 RDWTHGVFIGAAMRSEATAAAEHKGKVIMHDPFAMRPFFGYNFGDYVAHWLSMEKRG-QV 532
Query: 539 PLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRVNGEDIAEPSPIGLLPKHGTINVTG 718
P IFHVNWFR + +GKF+WPG+GEN RV++W+ RRVNGE S IG +P G +N+ G
Sbjct: 533 PKIFHVNWFRKSAEGKFMWPGYGENSRVLEWILRRVNGESCYVDSAIGHIPAEGALNLDG 592
Query: 719 LDAKWD--EMFSLPKAYLSEDVQETMKFLREQTGED 820
+ K D E+FSLPK + S++V++ + Q G D
Sbjct: 593 MKDKVDVKEIFSLPKEFWSQEVKDIRTYFESQVGAD 628
>sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 336 bits (862), Expect = 4e-92
Identities = 155/275 (56%), Positives = 200/275 (72%), Gaps = 2/275 (0%)
Frame = +2
Query: 2 GFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWEGLEDEVDKNLEITSWLGVK 181
GFFGVAPGT+ KTNPNA+KT QKN+IFTNVAETSDG YWEG+++ + + ITSW +
Sbjct: 331 GFFGVAPGTSVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGIDEPLASGVTITSWKNKE 390
Query: 182 MKVGDKSKGLAAHANSRFCCPASQCPIIHPKWEDPKGVPISAIVFGGRRPEGIPLIMQAF 361
D AH NSRFC PASQCPII WE P+GVPI I+FGGRRP G+PL+ +A
Sbjct: 391 WSSEDGEP--CAHPNSRFCTPASQCPIIDAAWESPEGVPIEGIIFGGRRPAGVPLVYEAL 448
Query: 362 NWKHGVMLGASLKSEATAAAEFKGKQIMHDPMAMRPFMGYNFGKYLQHWLDL-EKPGRKM 538
+W+HGV +GA+++SEATAAAE KGK IMHDP AMRPF GYNFGKYL HWL + + P K+
Sbjct: 449 SWQHGVFVGAAMRSEATAAAEHKGKIIMHDPFAMRPFFGYNFGKYLAHWLSMAQHPAAKL 508
Query: 539 PLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRVNGEDIAEPSPIGLLPKHGTINVTG 718
P IFHVNWFR + +GKF+WPGFGEN RV++WM R++G+ + +PIG +PK +N+ G
Sbjct: 509 PKIFHVNWFRKDKEGKFLWPGFGENSRVLEWMFNRIDGKASTKLTPIGYIPKEDALNLKG 568
Query: 719 L-DAKWDEMFSLPKAYLSEDVQETMKFLREQTGED 820
L E+FS+ K + ++V++ K+L +Q D
Sbjct: 569 LGHINMMELFSISKEFWEKEVEDIEKYLEDQVNAD 603
>sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 336 bits (862), Expect = 4e-92
Identities = 156/275 (56%), Positives = 201/275 (73%), Gaps = 2/275 (0%)
Frame = +2
Query: 2 GFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWEGLEDEVDKNLEITSWLGVK 181
GFFGVAPGT+ KTNPNA+KT QKN+IFTNVAETSDG YWEG+++ + + ITSW +
Sbjct: 331 GFFGVAPGTSVKTNPNAIKTIQKNTIFTNVAETSDGGVYWEGIDEPLASGVTITSWKNKE 390
Query: 182 MKVGDKSKGLAAHANSRFCCPASQCPIIHPKWEDPKGVPISAIVFGGRRPEGIPLIMQAF 361
D AH NSRFC PASQCPII WE P+GVPI I+FGGRRP G+PL+ +A
Sbjct: 391 WSPEDGEP--CAHPNSRFCTPASQCPIIDAAWESPEGVPIEGIIFGGRRPAGVPLVYEAL 448
Query: 362 NWKHGVMLGASLKSEATAAAEFKGKQIMHDPMAMRPFMGYNFGKYLQHWLDL-EKPGRKM 538
+W+HGV +GA+++SEATAAAE KGK IMHDP AMRPF GYNFGKYL HWL + + P K+
Sbjct: 449 SWQHGVFVGAAMRSEATAAAEHKGKIIMHDPFAMRPFFGYNFGKYLAHWLSMAQHPAAKL 508
Query: 539 PLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRVNGEDIAEPSPIGLLPKHGTINVTG 718
P IFHVNWFR + +GKF+WPGFGEN RV++WM R++G+ A+ +PIG +PK +N+ G
Sbjct: 509 PKIFHVNWFRKDKEGKFLWPGFGENSRVLEWMFNRIDGKAGAKLTPIGYIPKEDALNLKG 568
Query: 719 L-DAKWDEMFSLPKAYLSEDVQETMKFLREQTGED 820
L E+FS+ K + ++V++ K+L +Q D
Sbjct: 569 LGHINVMELFSISKEFWEKEVEDIEKYLEDQVNAD 603
>sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 335 bits (860), Expect = 7e-92
Identities = 155/275 (56%), Positives = 199/275 (72%), Gaps = 2/275 (0%)
Frame = +2
Query: 2 GFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSYYWEGLEDEVDKNLEITSWLGVK 181
GFFGVAPGT+ +TNPNA+KT QKN+IFTNVAETSDG YWEG++ + +++ SW G +
Sbjct: 331 GFFGVAPGTSVRTNPNAIKTIQKNTIFTNVAETSDGGVYWEGIDQPLAARVKLISWKGKE 390
Query: 182 MKVGDKSKGLAAHANSRFCCPASQCPIIHPKWEDPKGVPISAIVFGGRRPEGIPLIMQAF 361
D AH NSRFC PASQCPII P WE P+GVPI I+FGGRRP G+PL+ +A
Sbjct: 391 WDPKDGEP--CAHPNSRFCTPASQCPIIDPDWESPEGVPIEGIIFGGRRPVGVPLVYEAL 448
Query: 362 NWKHGVMLGASLKSEATAAAEFKGKQIMHDPMAMRPFMGYNFGKYLQHWLDL-EKPGRKM 538
+W+HGV +GA+++SEATAAAE+KGK IMHDP AM PF GYNFG+YL HWL + ++P K+
Sbjct: 449 SWQHGVFVGAAMRSEATAAAEYKGKVIMHDPFAMGPFFGYNFGQYLAHWLSMAQRPAAKL 508
Query: 539 PLIFHVNWFRLNDKGKFVWPGFGENIRVIDWMCRRVNGEDIAEPSPIGLLPKHGTINVTG 718
P IFHVNWFR + G+F+WPGFGEN RV++WM RV GE A +PIG +P +++ G
Sbjct: 509 PKIFHVNWFRKDKAGRFLWPGFGENSRVLEWMFNRVVGEGGASVTPIGYIPDEDALDLRG 568
Query: 719 L-DAKWDEMFSLPKAYLSEDVQETMKFLREQTGED 820
L D E+F + K + E+V+E K+L EQ D
Sbjct: 569 LGDVDVKELFHISKEFWEEEVEEIQKYLEEQVNVD 603
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 108,775,800
Number of Sequences: 369166
Number of extensions: 2514089
Number of successful extensions: 6889
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6758
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7907893860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)