Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_023_H11
(868 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P41759|PGK_SCHMA Phosphoglycerate kinase 382 e-106
sp|Q8MIF7|PGK2_HORSE Phosphoglycerate kinase, testis specific 357 2e-98
sp|P51903|PGK_CHICK Phosphoglycerate kinase 355 1e-97
sp|P00558|PGK1_HUMAN Phosphoglycerate kinase 1 (Primer reco... 353 4e-97
sp|Q60HD8|PGK1_MACFA Phosphoglycerate kinase 1 353 4e-97
sp|P29408|PGK1_MACEU Phosphoglycerate kinase 1 352 6e-97
sp|P91427|PGK_CAEEL Probable phosphoglycerate kinase 351 2e-96
sp|P50310|PGK1_CRIGR Phosphoglycerate kinase 1 350 2e-96
sp|P16617|PGK1_RAT Phosphoglycerate kinase 1 349 5e-96
sp|Q6RI85|PGK2_PIG Phosphoglycerate kinase, testis specific 349 5e-96
>sp|P41759|PGK_SCHMA Phosphoglycerate kinase
Length = 416
Score = 382 bits (981), Expect = e-106
Identities = 191/245 (77%), Positives = 212/245 (86%)
Frame = +3
Query: 78 RVLIRVDFNVPMKEGKITNNQRLVAALPTIKYALEKNAKSVVLMSHLGRPDGTPNKKYSL 257
RVLIRVDFNVPMK+GK+TN QR+ AA+PTIKYAL+K AKSVVLMSHLGRPDG KYSL
Sbjct: 17 RVLIRVDFNVPMKDGKVTNTQRIAAAIPTIKYALDKGAKSVVLMSHLGRPDGHKVDKYSL 76
Query: 258 EPVAAEVSKLLGKEVKFLHDCVGDEVVAACKNPAHGSIFLLENLRFHVEEEGKGVDASGN 437
+PV EVSKLLGKEV FL+DCVG +VV AC NPA GS+FLLENLRFHVEEEGKGV +G
Sbjct: 77 KPVCPEVSKLLGKEVTFLNDCVGPDVVNACANPAPGSVFLLENLRFHVEEEGKGVSPTGE 136
Query: 438 KTKASAEAVKKFSECLTSLGDVYVNDAFGTAHRAHASMVGCSLPQKASGFLLKTELTYFA 617
KTKA+A+ +K FSE LT LGDVYVNDAFGTAHRAHASMVGC LPQKA GFL+ ELTYFA
Sbjct: 137 KTKATADQIKAFSESLTKLGDVYVNDAFGTAHRAHASMVGCQLPQKACGFLMNKELTYFA 196
Query: 618 KALENPARPFLAIIGGAKVSDKILLIKNMLNIVDELIITGGMAFTFLKVLNNMEIGNSLF 797
KALENP RPFLAI+GGAKVSDKI LI NML+ V+ELII GGMA+TFLK ++NM IGNSLF
Sbjct: 197 KALENPERPFLAILGGAKVSDKIQLINNMLDKVNELIIGGGMAYTFLKQIHNMHIGNSLF 256
Query: 798 DEPGS 812
D PG+
Sbjct: 257 DAPGA 261
>sp|Q8MIF7|PGK2_HORSE Phosphoglycerate kinase, testis specific
Length = 417
Score = 357 bits (916), Expect = 2e-98
Identities = 180/246 (73%), Positives = 207/246 (84%), Gaps = 1/246 (0%)
Frame = +3
Query: 78 RVLIRVDFNVPMKEGKITNNQRLVAALPTIKYALEKNAKSVVLMSHLGRPDGTPNK-KYS 254
R+++RVDFNVPMK+ +ITNNQR+ A++P+IKY L+ A+SVVLMSHLGRPDG P KYS
Sbjct: 18 RIIMRVDFNVPMKKNQITNNQRIKASIPSIKYCLDNGARSVVLMSHLGRPDGVPMPDKYS 77
Query: 255 LEPVAAEVSKLLGKEVKFLHDCVGDEVVAACKNPAHGSIFLLENLRFHVEEEGKGVDASG 434
LEPVAAE+ LLGK+V FL DCVG EV AC NPA GS+ LLENLRFHVEEEGKG D SG
Sbjct: 78 LEPVAAELKSLLGKDVLFLKDCVGSEVEKACANPATGSVILLENLRFHVEEEGKGQDPSG 137
Query: 435 NKTKASAEAVKKFSECLTSLGDVYVNDAFGTAHRAHASMVGCSLPQKASGFLLKTELTYF 614
NK KA A ++ F L+ LGDVYVNDAFGTAHRAH+SMVG +LPQKASGFL+K EL YF
Sbjct: 138 NKLKAEAGKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGINLPQKASGFLMKKELEYF 197
Query: 615 AKALENPARPFLAIIGGAKVSDKILLIKNMLNIVDELIITGGMAFTFLKVLNNMEIGNSL 794
AKALENP RPFLAI+GGAKV+DKI LIKNML+ V+E+II GGMA+TFLKVLNNMEIG SL
Sbjct: 198 AKALENPERPFLAILGGAKVADKIQLIKNMLDKVNEMIIGGGMAYTFLKVLNNMEIGASL 257
Query: 795 FDEPGS 812
FDE G+
Sbjct: 258 FDEEGA 263
>sp|P51903|PGK_CHICK Phosphoglycerate kinase
Length = 417
Score = 355 bits (910), Expect = 1e-97
Identities = 181/246 (73%), Positives = 204/246 (82%), Gaps = 1/246 (0%)
Frame = +3
Query: 78 RVLIRVDFNVPMKEGKITNNQRLVAALPTIKYALEKNAKSVVLMSHLGRPDGTPNK-KYS 254
RV++RVDFNVPMK+ KITNNQR+ AA+PTIK+ L+ AKSVVLMSHLGRPDG P K+S
Sbjct: 18 RVVMRVDFNVPMKDHKITNNQRIKAAVPTIKHCLDHGAKSVVLMSHLGRPDGVPMPDKFS 77
Query: 255 LEPVAAEVSKLLGKEVKFLHDCVGDEVVAACKNPAHGSIFLLENLRFHVEEEGKGVDASG 434
PVA E+ LLG+EV FL DCVG EV AC NPA+GS+ LLENLRFHVEEEGKG DASG
Sbjct: 78 FSPVAVELKALLGREVSFLKDCVGPEVEKACANPANGSVILLENLRFHVEEEGKGKDASG 137
Query: 435 NKTKASAEAVKKFSECLTSLGDVYVNDAFGTAHRAHASMVGCSLPQKASGFLLKTELTYF 614
NK KA A V+ F L+ LGDVYVNDAFGTAHRAH+SMVG LPQKA+GFL+K EL YF
Sbjct: 138 NKIKADAAKVEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVHLPQKAAGFLMKKELDYF 197
Query: 615 AKALENPARPFLAIIGGAKVSDKILLIKNMLNIVDELIITGGMAFTFLKVLNNMEIGNSL 794
AKALE+P RPFLAI+GGAKV DKI LI NML+ V+E+II GGMAFTFLKVLNNM+IGNSL
Sbjct: 198 AKALESPERPFLAILGGAKVQDKIQLISNMLDKVNEMIIGGGMAFTFLKVLNNMQIGNSL 257
Query: 795 FDEPGS 812
FDE GS
Sbjct: 258 FDEEGS 263
>sp|P00558|PGK1_HUMAN Phosphoglycerate kinase 1 (Primer recognition protein 2) (PRP 2)
Length = 417
Score = 353 bits (905), Expect = 4e-97
Identities = 179/246 (72%), Positives = 203/246 (82%), Gaps = 1/246 (0%)
Frame = +3
Query: 78 RVLIRVDFNVPMKEGKITNNQRLVAALPTIKYALEKNAKSVVLMSHLGRPDGTPNK-KYS 254
RV++RVDFNVPMK +ITNNQR+ AA+P+IK+ L+ AKSVVLMSHLGRPDG P KYS
Sbjct: 18 RVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYS 77
Query: 255 LEPVAAEVSKLLGKEVKFLHDCVGDEVVAACKNPAHGSIFLLENLRFHVEEEGKGVDASG 434
LEPVA E+ LLGK+V FL DCVG EV AC NPA GS+ LLENLRFHVEEEGKG DASG
Sbjct: 78 LEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASG 137
Query: 435 NKTKASAEAVKKFSECLTSLGDVYVNDAFGTAHRAHASMVGCSLPQKASGFLLKTELTYF 614
NK KA ++ F L+ LGDVYVNDAFGTAHRAH+SMVG +LPQKA GFL+K EL YF
Sbjct: 138 NKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPQKAGGFLMKKELNYF 197
Query: 615 AKALENPARPFLAIIGGAKVSDKILLIKNMLNIVDELIITGGMAFTFLKVLNNMEIGNSL 794
AKALE+P RPFLAI+GGAKV+DKI LI NML+ V+E+II GGMAFTFLKVLNNMEIG SL
Sbjct: 198 AKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFLKVLNNMEIGTSL 257
Query: 795 FDEPGS 812
FDE G+
Sbjct: 258 FDEEGA 263
>sp|Q60HD8|PGK1_MACFA Phosphoglycerate kinase 1
Length = 417
Score = 353 bits (905), Expect = 4e-97
Identities = 179/246 (72%), Positives = 203/246 (82%), Gaps = 1/246 (0%)
Frame = +3
Query: 78 RVLIRVDFNVPMKEGKITNNQRLVAALPTIKYALEKNAKSVVLMSHLGRPDGTPNK-KYS 254
RV++RVDFNVPMK +ITNNQR+ AA+P+IK+ L+ AKSVVLMSHLGRPDG P KYS
Sbjct: 18 RVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYS 77
Query: 255 LEPVAAEVSKLLGKEVKFLHDCVGDEVVAACKNPAHGSIFLLENLRFHVEEEGKGVDASG 434
LEPVA E+ LLGK+V FL DCVG EV AC NPA GS+ LLENLRFHVEEEGKG DASG
Sbjct: 78 LEPVAVELKSLLGKDVLFLKDCVGPEVEKACANPAAGSVILLENLRFHVEEEGKGKDASG 137
Query: 435 NKTKASAEAVKKFSECLTSLGDVYVNDAFGTAHRAHASMVGCSLPQKASGFLLKTELTYF 614
NK KA ++ F L+ LGDVYVNDAFGTAHRAH+SMVG +LPQKA GFL+K EL YF
Sbjct: 138 NKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPQKAGGFLMKKELNYF 197
Query: 615 AKALENPARPFLAIIGGAKVSDKILLIKNMLNIVDELIITGGMAFTFLKVLNNMEIGNSL 794
AKALE+P RPFLAI+GGAKV+DKI LI NML+ V+E+II GGMAFTFLKVLNNMEIG SL
Sbjct: 198 AKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFLKVLNNMEIGTSL 257
Query: 795 FDEPGS 812
FDE G+
Sbjct: 258 FDEEGA 263
>sp|P29408|PGK1_MACEU Phosphoglycerate kinase 1
Length = 417
Score = 352 bits (904), Expect = 6e-97
Identities = 180/246 (73%), Positives = 203/246 (82%), Gaps = 1/246 (0%)
Frame = +3
Query: 78 RVLIRVDFNVPMKEGKITNNQRLVAALPTIKYALEKNAKSVVLMSHLGRPDGTPNK-KYS 254
RV++RVDFNVPMK +ITNNQR+ AALP+I Y L+ AKSVVLMSHLGRPDG P KYS
Sbjct: 18 RVIMRVDFNVPMKNKEITNNQRIKAALPSINYCLDNGAKSVVLMSHLGRPDGVPMPDKYS 77
Query: 255 LEPVAAEVSKLLGKEVKFLHDCVGDEVVAACKNPAHGSIFLLENLRFHVEEEGKGVDASG 434
LEPVAAE+ LLGK+V FL DCVG EV AC NP +GSI LLENLRFHVEEEGKG DASG
Sbjct: 78 LEPVAAELKSLLGKDVLFLKDCVGPEVEQACANPPNGSIILLENLRFHVEEEGKGKDASG 137
Query: 435 NKTKASAEAVKKFSECLTSLGDVYVNDAFGTAHRAHASMVGCSLPQKASGFLLKTELTYF 614
NK KA ++ F L+ LGDVYVNDAFGTAHRAH+SMVG +LPQKA GFL+K ELTYF
Sbjct: 138 NKIKAEPAKMEAFQASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPQKACGFLMKKELTYF 197
Query: 615 AKALENPARPFLAIIGGAKVSDKILLIKNMLNIVDELIITGGMAFTFLKVLNNMEIGNSL 794
AKAL++P RPFLAI+GGAKV+DKI LI NML+ V+E+II GGM FTFLKVLNNMEIG SL
Sbjct: 198 AKALDSPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMGFTFLKVLNNMEIGTSL 257
Query: 795 FDEPGS 812
FDE G+
Sbjct: 258 FDEEGA 263
>sp|P91427|PGK_CAEEL Probable phosphoglycerate kinase
Length = 417
Score = 351 bits (900), Expect = 2e-96
Identities = 175/245 (71%), Positives = 207/245 (84%)
Frame = +3
Query: 78 RVLIRVDFNVPMKEGKITNNQRLVAALPTIKYALEKNAKSVVLMSHLGRPDGTPNKKYSL 257
RVLIRVDFNVP+K+GKITNNQR+ AA+PTI++AL AKSVVLMSHLGRPDG KY+L
Sbjct: 18 RVLIRVDFNVPLKDGKITNNQRIAAAVPTIQHALSNGAKSVVLMSHLGRPDGRRQDKYTL 77
Query: 258 EPVAAEVSKLLGKEVKFLHDCVGDEVVAACKNPAHGSIFLLENLRFHVEEEGKGVDASGN 437
+PVA E+ LL K+V FL DCVG EV AAC +PA GS+ LLENLR+H+EEEGKGVDASG
Sbjct: 78 KPVAEELKALLKKDVLFLDDCVGSEVEAACADPAPGSVILLENLRYHLEEEGKGVDASGA 137
Query: 438 KTKASAEAVKKFSECLTSLGDVYVNDAFGTAHRAHASMVGCSLPQKASGFLLKTELTYFA 617
K KA + AVKKF E LT LGD+YVNDAFGTAHRAH+SMVG Q+ASGFLLK EL+YF+
Sbjct: 138 KVKADSAAVKKFRESLTKLGDIYVNDAFGTAHRAHSSMVGVEHSQRASGFLLKNELSYFS 197
Query: 618 KALENPARPFLAIIGGAKVSDKILLIKNMLNIVDELIITGGMAFTFLKVLNNMEIGNSLF 797
KAL+NPARPFLAI+GGAKV+DKI LIKN+L+ V+E+II GGMA+TFLKV ++IGNSL+
Sbjct: 198 KALDNPARPFLAILGGAKVADKIQLIKNLLDKVNEMIIGGGMAYTFLKVAQGVKIGNSLY 257
Query: 798 DEPGS 812
DE G+
Sbjct: 258 DEEGA 262
>sp|P50310|PGK1_CRIGR Phosphoglycerate kinase 1
Length = 417
Score = 350 bits (899), Expect = 2e-96
Identities = 178/246 (72%), Positives = 203/246 (82%), Gaps = 1/246 (0%)
Frame = +3
Query: 78 RVLIRVDFNVPMKEGKITNNQRLVAALPTIKYALEKNAKSVVLMSHLGRPDGTPNK-KYS 254
RV++RVDFNVPMK +ITNNQR+ AA+P+IK+ L+ AKSVVLMSHLGRPDG P KYS
Sbjct: 18 RVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRPDGVPMPDKYS 77
Query: 255 LEPVAAEVSKLLGKEVKFLHDCVGDEVVAACKNPAHGSIFLLENLRFHVEEEGKGVDASG 434
LEPVAAE+ LLGK+V FL DCVG EV AC NPA G++ LLENLRFHVEEEGKG DASG
Sbjct: 78 LEPVAAELKSLLGKDVLFLKDCVGPEVENACANPAAGTVILLENLRFHVEEEGKGKDASG 137
Query: 435 NKTKASAEAVKKFSECLTSLGDVYVNDAFGTAHRAHASMVGCSLPQKASGFLLKTELTYF 614
NK KA + F L+ LGDVYVNDAFGTAHRAH+SMVG +LPQKA GFL+K EL YF
Sbjct: 138 NKIKAEPAKIDAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPQKAGGFLMKKELNYF 197
Query: 615 AKALENPARPFLAIIGGAKVSDKILLIKNMLNIVDELIITGGMAFTFLKVLNNMEIGNSL 794
AKALE+P RPFLAI+GGAKV+DKI LI NML+ V+E+II GGMAFTFLKVLNNMEIG SL
Sbjct: 198 AKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFLKVLNNMEIGTSL 257
Query: 795 FDEPGS 812
+DE G+
Sbjct: 258 YDEEGA 263
>sp|P16617|PGK1_RAT Phosphoglycerate kinase 1
Length = 417
Score = 349 bits (896), Expect = 5e-96
Identities = 177/246 (71%), Positives = 202/246 (82%), Gaps = 1/246 (0%)
Frame = +3
Query: 78 RVLIRVDFNVPMKEGKITNNQRLVAALPTIKYALEKNAKSVVLMSHLGRPDGTPNK-KYS 254
RV++RVDFNVPMK +ITNNQR+ AA+P+IK+ L+ A SVVLMSHLGRPDG P KYS
Sbjct: 18 RVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGANSVVLMSHLGRPDGVPMPDKYS 77
Query: 255 LEPVAAEVSKLLGKEVKFLHDCVGDEVVAACKNPAHGSIFLLENLRFHVEEEGKGVDASG 434
LEPVAAE+ LLGK+V FL DCVG EV AC NPA G++ LLENLRFHVEEEGKG DASG
Sbjct: 78 LEPVAAELKSLLGKDVLFLKDCVGSEVENACANPAAGTVILLENLRFHVEEEGKGKDASG 137
Query: 435 NKTKASAEAVKKFSECLTSLGDVYVNDAFGTAHRAHASMVGCSLPQKASGFLLKTELTYF 614
NK KA + F L+ LGDVYVNDAFGTAHRAH+SMVG +LPQKA GFL+K EL YF
Sbjct: 138 NKVKAEPAKIDAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPQKAGGFLMKKELNYF 197
Query: 615 AKALENPARPFLAIIGGAKVSDKILLIKNMLNIVDELIITGGMAFTFLKVLNNMEIGNSL 794
AKALE+P RPFLAI+GGAKV+DKI LI NML+ V+E+II GGMAFTFLKVLNNMEIG SL
Sbjct: 198 AKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFLKVLNNMEIGTSL 257
Query: 795 FDEPGS 812
+DE G+
Sbjct: 258 YDEEGA 263
>sp|Q6RI85|PGK2_PIG Phosphoglycerate kinase, testis specific
Length = 417
Score = 349 bits (896), Expect = 5e-96
Identities = 177/246 (71%), Positives = 203/246 (82%), Gaps = 1/246 (0%)
Frame = +3
Query: 78 RVLIRVDFNVPMKEGKITNNQRLVAALPTIKYALEKNAKSVVLMSHLGRPDGTPNK-KYS 254
RV++RVDFNVPMK ++TNNQR+ A+LP+I+Y L+ A+SVVLMSHLGRPDG KYS
Sbjct: 18 RVIMRVDFNVPMKRNQVTNNQRIKASLPSIRYCLDNGARSVVLMSHLGRPDGVAMPDKYS 77
Query: 255 LEPVAAEVSKLLGKEVKFLHDCVGDEVVAACKNPAHGSIFLLENLRFHVEEEGKGVDASG 434
LEPVAAE+ LLGK+V FL DCVG E AC NP GS+ LLENLRFHVEEEGKG D SG
Sbjct: 78 LEPVAAELKSLLGKDVLFLKDCVGSEAEQACANPPAGSVILLENLRFHVEEEGKGQDPSG 137
Query: 435 NKTKASAEAVKKFSECLTSLGDVYVNDAFGTAHRAHASMVGCSLPQKASGFLLKTELTYF 614
NK KA + V+ F L+ LGDVYVNDAFGTAHRAH+SMVG +LPQKASGFL+K EL YF
Sbjct: 138 NKLKAEPDKVEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVNLPQKASGFLMKKELDYF 197
Query: 615 AKALENPARPFLAIIGGAKVSDKILLIKNMLNIVDELIITGGMAFTFLKVLNNMEIGNSL 794
AKALENP RPFLAI+GGAKV+DKI LIKNML+ V+E+II GGMAFTFLKVLNNMEIG SL
Sbjct: 198 AKALENPERPFLAILGGAKVADKIQLIKNMLDKVNEMIIGGGMAFTFLKVLNNMEIGASL 257
Query: 795 FDEPGS 812
FD+ G+
Sbjct: 258 FDKEGA 263
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,167,357
Number of Sequences: 369166
Number of extensions: 1768303
Number of successful extensions: 5557
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4918
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8550075140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)