Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_023_G21
(333 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P14586|HRP3_PLAFS Histidine-rich protein 33 0.27
sp|Q02930|CREB5_HUMAN cAMP response element-binding protein... 30 1.7
sp|P04929|HRPX_PLALO Histidine-rich glycoprotein precursor 30 1.7
sp|Q8K1L0|CREB5_MOUSE cAMP response element-binding protein... 30 1.7
sp|Q9W349|LOZEN_DROME Lozenge protein 30 2.3
sp|P09238|MMP10_HUMAN Stromelysin-2 precursor (Matrix metal... 28 8.7
sp|P08254|MMP3_HUMAN Stromelysin-1 precursor (Matrix metall... 28 8.7
>sp|P14586|HRP3_PLAFS Histidine-rich protein
Length = 82
Score = 32.7 bits (73), Expect = 0.27
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = -3
Query: 160 NHRLGHVFYLHHTLLSHPFYHPLRNLHAHFVYHRLH 53
NHR H F+ HH L H ++ + H H +H H
Sbjct: 3 NHRYHHYFHRHHHLNHHLYHRHHHHRHHHHRHHHRH 38
Score = 28.1 bits (61), Expect = 6.6
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = -3
Query: 181 HRLFYISNHRLGHVFYLHHTLLSHPFYHPLRNLHAHFVYHRLHIHPDHFVGLHL 20
H F+ +H H+++ HH H +H R+ H H + H+ + H H + L L
Sbjct: 7 HHYFHRHHHLNHHLYHRHH----HHRHHHHRHHHRHQILHQ-NRHQIHQILLSL 55
>sp|Q02930|CREB5_HUMAN cAMP response element-binding protein 5 (CRE-BPa)
Length = 508
Score = 30.0 bits (66), Expect = 1.7
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -3
Query: 157 HRLGHVFYLHHTLLSHPFYHPLRNLHAHFVYHRLHIHPDHFVG 29
H H H +HP +H +LHAH +H+ HP G
Sbjct: 296 HPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTG 338
Score = 28.1 bits (61), Expect = 6.6
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -3
Query: 130 HHTLLSHPFYHPLRNLHAHFVYHRLHIHPDH 38
HH + SHP H + L H Y H HP H
Sbjct: 271 HHHMHSHPHQH--QTLPPHHPYPHQHQHPAH 299
>sp|P04929|HRPX_PLALO Histidine-rich glycoprotein precursor
Length = 351
Score = 30.0 bits (66), Expect = 1.7
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -3
Query: 160 NHRLGHVFYLHHTLLSHPFYHPLRNLHAHFVYHRLHIHPDH 38
+H LGH + HH +H +H + H H +H H H +H
Sbjct: 112 HHHLGHHHHHHHA--AHHHHHEEHHHHHHAAHH--HHHEEH 148
Score = 30.0 bits (66), Expect = 1.7
Identities = 17/55 (30%), Positives = 22/55 (40%)
Frame = -3
Query: 187 HLHRLFYISNHRLGHVFYLHHTLLSHPFYHPLRNLHAHFVYHRLHIHPDHFVGLH 23
H H L Y +H H + HH H +H + H H +H H H H H
Sbjct: 162 HHHHLGYHHHHAPHHHHHHHHAPHHHHHHHHAPH-HHHHHHHAPHHHHHHHHAPH 215
Score = 29.6 bits (65), Expect = 2.3
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Frame = -3
Query: 187 HLHRLFYISNHRLGHVFYLHHTLLSHPFYHPLRNLHAHFVYHR-LHIHPDHFVGLH 23
H H + +H GH + HH +H +H + H H +H H H H H
Sbjct: 230 HHHGHHHHHHHHHGHHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAH 285
Score = 29.3 bits (64), Expect = 3.0
Identities = 14/46 (30%), Positives = 19/46 (41%)
Frame = -3
Query: 160 NHRLGHVFYLHHTLLSHPFYHPLRNLHAHFVYHRLHIHPDHFVGLH 23
+H H + HH H +H + H H +H H H H G H
Sbjct: 200 HHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHGHH 245
Score = 28.9 bits (63), Expect = 3.9
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = -3
Query: 160 NHRLGHVFYLHHTLLSHPFYHPLRNLHAHFVYHRLHIHPDHFVGLH 23
+H H + HH H +H H H +H H H H G H
Sbjct: 180 HHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHGHH 225
Score = 28.9 bits (63), Expect = 3.9
Identities = 16/56 (28%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Frame = -3
Query: 187 HLHRLFYISNHRLGHVFYLHHTLLSHPFYHPLRNLHAHFVYHR-LHIHPDHFVGLH 23
H H + +H GH + HH H +H + H H +H H H H H
Sbjct: 220 HHHGHHHHHHHHHGHHHHHHHHHGHHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAH 275
Score = 28.5 bits (62), Expect = 5.1
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = -3
Query: 160 NHRLGHVFYLHHTLLSHPFYHPLRNLHAHFVYHRLHIHPDHFVGLH 23
+H H + HH H +H H H +H H H H G H
Sbjct: 190 HHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHH 235
Score = 28.1 bits (61), Expect = 6.6
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -3
Query: 187 HLHRLFYISNHRLGHVFYLHHTLLSHPFYHPLRNLHAHFVYHRLHIHPDHFVGLH 23
H H + ++H H + HH +H +H + H H +H H H +G H
Sbjct: 117 HHHHHHHAAHHH-HHEEHHHHHHAAHHHHHEEHHHHHHAAHHHPWFH-HHHLGYH 169
Score = 28.1 bits (61), Expect = 6.6
Identities = 15/50 (30%), Positives = 20/50 (40%)
Frame = -3
Query: 187 HLHRLFYISNHRLGHVFYLHHTLLSHPFYHPLRNLHAHFVYHRLHIHPDH 38
H H + +H H + HH HP++H H H YH H H
Sbjct: 135 HHHHAAHHHHHEEHH--HHHHAAHHHPWFH-----HHHLGYHHHHAPHHH 177
Score = 28.1 bits (61), Expect = 6.6
Identities = 16/56 (28%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
Frame = -3
Query: 187 HLHRLFYISNHRLGHVFYLHHTLLSHPFYHPLRNLHAHFVYHR-LHIHPDHFVGLH 23
H H + +H GH + HH H +H H H +H H H H H
Sbjct: 210 HHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHGHHHHHHHHHDAHHHHHHHHDAH 265
Score = 28.1 bits (61), Expect = 6.6
Identities = 14/50 (28%), Positives = 19/50 (38%)
Frame = -3
Query: 187 HLHRLFYISNHRLGHVFYLHHTLLSHPFYHPLRNLHAHFVYHRLHIHPDH 38
H H + +H H + HH H +H H H +H H H H
Sbjct: 300 HHHDAHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHH 349
Score = 27.7 bits (60), Expect = 8.7
Identities = 14/55 (25%), Positives = 21/55 (38%)
Frame = -3
Query: 187 HLHRLFYISNHRLGHVFYLHHTLLSHPFYHPLRNLHAHFVYHRLHIHPDHFVGLH 23
H H + +H + HH +H +H + H H +H H H H H
Sbjct: 270 HHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHDAHHHHHHHHDAH 324
>sp|Q8K1L0|CREB5_MOUSE cAMP response element-binding protein 5 (CRE-BPa)
Length = 353
Score = 30.0 bits (66), Expect = 1.7
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -3
Query: 157 HRLGHVFYLHHTLLSHPFYHPLRNLHAHFVYHRLHIHPDHFVG 29
H H H +HP +H +LHAH +H+ HP G
Sbjct: 141 HPAHHPHPQPHHQQNHPHHHSHSHLHAHPAHHQTSPHPPLHTG 183
Score = 28.9 bits (63), Expect = 3.9
Identities = 14/31 (45%), Positives = 15/31 (48%)
Frame = -3
Query: 130 HHTLLSHPFYHPLRNLHAHFVYHRLHIHPDH 38
HH L SHP H + L H Y H HP H
Sbjct: 116 HHHLHSHPHQH--QTLPPHHPYPHQHQHPAH 144
>sp|Q9W349|LOZEN_DROME Lozenge protein
Length = 826
Score = 29.6 bits (65), Expect = 2.3
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -3
Query: 145 HVFYLHHTLLSHPFYHPLRNLHAHFVYHRLHIHPDH 38
H +LHH + HP H H +H H HP +
Sbjct: 108 HHHHLHHHYSPYHHAHPYHPPHPHAPHHHHHHHPPY 143
>sp|P09238|MMP10_HUMAN Stromelysin-2 precursor (Matrix metalloproteinase-10) (MMP-10)
(Transin-2) (SL-2)
Length = 476
Score = 27.7 bits (60), Expect = 8.7
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = -3
Query: 175 LFYISNHRLGHVFYLHHTLLSHPFYHPLRNLHAHFVYHRL 56
LF ++ H LGH L H+ + +PL N RL
Sbjct: 211 LFLVAAHELGHSLGLFHSANTEALMYPLYNSFTELAQFRL 250
>sp|P08254|MMP3_HUMAN Stromelysin-1 precursor (Matrix metalloproteinase-3) (MMP-3)
(Transin-1) (SL-1)
Length = 477
Score = 27.7 bits (60), Expect = 8.7
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Frame = -3
Query: 175 LFYISNHRLGHVFYLHHT----LLSHPFYHPLRNL 83
LF ++ H +GH L H+ L +P YH L +L
Sbjct: 212 LFLVAAHEIGHSLGLFHSANTEALMYPLYHSLTDL 246
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,922,590
Number of Sequences: 369166
Number of extensions: 460503
Number of successful extensions: 1312
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 68,354,980
effective HSP length: 78
effective length of database: 53,945,650
effective search space used: 1726260800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)