Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_023_G20
(331 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2) 201 6e-52
sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2) 199 2e-51
sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2) 197 5e-51
sp|P05086|EF2_MESAU Elongation factor 2 (EF-2) 197 5e-51
sp|P05197|EF2_RAT Elongation factor 2 (EF-2) 197 5e-51
sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2) 194 4e-50
sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2) 188 4e-48
sp|P13060|EF2_DROME Elongation factor 2 (EF-2) 182 2e-46
sp|Q6BJ25|EF2_DEBHA Elongation factor 2 (EF-2) 167 7e-42
sp|Q875Z2|EF2_SACCA Elongation factor 2 (EF-2) 165 3e-41
>sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2)
Length = 858
Score = 201 bits (510), Expect = 6e-52
Identities = 88/109 (80%), Positives = 100/109 (91%)
Frame = +2
Query: 2 TARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAA 181
+AR E+K+R RYL E Y+WDVTE+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA
Sbjct: 623 SARQELKQRARYLAEKYEWDVTEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAG 682
Query: 182 FNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYA 328
F WATK+GVLCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YA
Sbjct: 683 FQWATKEGVLCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYA 731
>sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2)
Length = 858
Score = 199 bits (505), Expect = 2e-51
Identities = 87/110 (79%), Positives = 99/110 (90%)
Frame = +2
Query: 2 TARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAA 181
+AR E+K+R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA
Sbjct: 623 SARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAG 682
Query: 182 FNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYAS 331
F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YAS
Sbjct: 683 FQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYAS 732
>sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2)
Length = 858
Score = 197 bits (502), Expect = 5e-51
Identities = 87/110 (79%), Positives = 98/110 (89%)
Frame = +2
Query: 2 TARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAA 181
+AR E+K R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA
Sbjct: 623 SARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAG 682
Query: 182 FNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYAS 331
F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YAS
Sbjct: 683 FQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYAS 732
>sp|P05086|EF2_MESAU Elongation factor 2 (EF-2)
Length = 858
Score = 197 bits (502), Expect = 5e-51
Identities = 87/110 (79%), Positives = 98/110 (89%)
Frame = +2
Query: 2 TARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAA 181
+AR E+K R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA
Sbjct: 623 SARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAG 682
Query: 182 FNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYAS 331
F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YAS
Sbjct: 683 FQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYAS 732
>sp|P05197|EF2_RAT Elongation factor 2 (EF-2)
Length = 858
Score = 197 bits (502), Expect = 5e-51
Identities = 87/110 (79%), Positives = 98/110 (89%)
Frame = +2
Query: 2 TARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAA 181
+AR E+K R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA
Sbjct: 623 SARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAG 682
Query: 182 FNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYAS 331
F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC YAS
Sbjct: 683 FQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLYAS 732
>sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2)
Length = 858
Score = 194 bits (494), Expect = 4e-50
Identities = 86/110 (78%), Positives = 97/110 (88%)
Frame = +2
Query: 2 TARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAA 181
+AR E+K R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQYLNEIKDSVVA
Sbjct: 623 SARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVAG 682
Query: 182 FNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYAS 331
F WATK+G LCEENMRGVRF++HDVTLHADAIHR GGQIIPTARRC YAS
Sbjct: 683 FQWATKEGALCEENMRGVRFDVHDVTLHADAIHRRGGQIIPTARRCLYAS 732
>sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2)
Length = 852
Score = 188 bits (477), Expect = 4e-48
Identities = 86/109 (78%), Positives = 97/109 (88%)
Frame = +2
Query: 5 ARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAF 184
AR E K R + L E Y++DVTE+RKIWCFGPDG GPNL++DV+KGVQYLNEIKDSVVA F
Sbjct: 618 ARDEFKARAKILAEKYEYDVTEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVAGF 677
Query: 185 NWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYAS 331
WAT++GVL +ENMRGVRFN+HDVTLHADAIHRGGGQIIPTARR FYAS
Sbjct: 678 QWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFYAS 726
>sp|P13060|EF2_DROME Elongation factor 2 (EF-2)
Length = 844
Score = 182 bits (463), Expect = 2e-46
Identities = 81/110 (73%), Positives = 95/110 (86%)
Frame = +2
Query: 2 TARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAA 181
+A+ E K R RYL E YD+DVTE+RKIWCFGPDG GPN ++D +K VQYLNEIKDSVVA
Sbjct: 609 SAKDEFKARARYLSEKYDYDVTEARKIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVAG 668
Query: 182 FNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYAS 331
F WA+K+G+L +EN+RGVRFNI+DVTLHADAIHRGGGQIIPT RRC YA+
Sbjct: 669 FQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLYAA 718
>sp|Q6BJ25|EF2_DEBHA Elongation factor 2 (EF-2)
Length = 842
Score = 167 bits (423), Expect = 7e-42
Identities = 79/108 (73%), Positives = 88/108 (81%)
Frame = +2
Query: 8 RSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFN 187
R + K R R L + + WDVT++RKIWCFGPDGNGPNLVVD +K VQYLNEIKDSVVAAF
Sbjct: 609 RDDFKARARILADNHGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVAAFQ 668
Query: 188 WATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYAS 331
WATK+G + EN+R VR NI DVTLHADAIHRGGGQIIPT RR YAS
Sbjct: 669 WATKEGPIFGENVRSVRVNILDVTLHADAIHRGGGQIIPTMRRVTYAS 716
>sp|Q875Z2|EF2_SACCA Elongation factor 2 (EF-2)
Length = 842
Score = 165 bits (418), Expect = 3e-41
Identities = 77/107 (71%), Positives = 87/107 (81%)
Frame = +2
Query: 8 RSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQYLNEIKDSVVAAFN 187
R ++K R R + + + WDVT++RKIWCFGPDGNGPNLVVD +K VQYLNEIKDSVVAAF
Sbjct: 609 RDDLKARARVMADEFGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVAAFQ 668
Query: 188 WATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFYA 328
WATK+G + E MR VR NI DVTLHADAIHRGGGQIIPT RR YA
Sbjct: 669 WATKEGPIFGEQMRSVRVNILDVTLHADAIHRGGGQIIPTMRRATYA 715
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,825,946
Number of Sequences: 369166
Number of extensions: 757763
Number of successful extensions: 2398
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2373
length of database: 68,354,980
effective HSP length: 78
effective length of database: 53,945,650
effective search space used: 1672315150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)