Planarian EST Database


Dr_sW_023_G06

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_023_G06
         (688 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P12717|ACTM_PISOC  Actin, muscle                               258   8e-69
sp|P92179|ACTC_BIOGL  Actin, cytoplasmic                          258   8e-69
sp|Q964E3|ACTC_BIOAL  Actin, cytoplasmic                          258   8e-69
sp|O17320|ACT_CRAGI  Actin                                        258   8e-69
sp|P41339|ACTA_LIMPO  Actin, acrosomal process isoform (Acti...   258   1e-68
sp|P92176|ACT2_LUMTE  Actin-2                                     258   1e-68
sp|Q964D9|ACTC_HELTI  Actin, cytoplasmic                          258   1e-68
sp|Q964E0|ACTC_BIOTE  Actin, cytoplasmic                          258   1e-68
sp|Q964E1|ACTC_BIOOB  Actin, cytoplasmic                          258   1e-68
sp|Q964E2|ACTC_BIOPF  Actin, cytoplasmic                          258   1e-68
>sp|P12717|ACTM_PISOC Actin, muscle
          Length = 376

 Score =  258 bits (660), Expect = 8e-69
 Identities = 158/247 (63%), Positives = 171/247 (69%), Gaps = 18/247 (7%)
 Frame = +1

Query: 1   MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 180
           M DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 181 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE*M 360
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 361 TQIMFELSMLRLCTLQFKRCCRYMHLVEQLVLY------WIL------VME*LTPYQSMR 504
           TQIMFE          F     Y+ +   L LY       I+      V   +  Y+   
Sbjct: 121 TQIMFE---------TFNSPAMYVAIQAVLSLYASGRTTGIVFDTGDGVSHTVPIYEGYA 171

Query: 505 LCSSTCYFEIRSCWRDLTDY**DSY-RRGTVHTQL--KRIVRDIK-RTC-TSL*LMQN-E 666
           L  +    ++    RDLTDY       RG   T    + IVRDIK + C T+L   Q  +
Sbjct: 172 LPHAILRLDLAG--RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYTALDFEQEMQ 229

Query: 667 TASASSS 687
           TAS+SSS
Sbjct: 230 TASSSSS 236

 Score = 80.9 bits (198), Expect = 3e-15
 Identities = 38/42 (90%), Positives = 41/42 (97%)
 Frame = +3

Query: 378 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE 503
           TFN+PAMYVAIQAVLSLYASGRTTGIV D+GDGV+HTVPIYE
Sbjct: 127 TFNSPAMYVAIQAVLSLYASGRTTGIVFDTGDGVSHTVPIYE 168

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 18/28 (64%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
 Frame = +2

Query: 503 GYALPHAILRLDLAG-EILPIIDEILTD 583
           GYALPHAILRLDLAG ++   + +ILT+
Sbjct: 169 GYALPHAILRLDLAGRDLTDYLMKILTE 196
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
          Length = 376

 Score =  258 bits (660), Expect = 8e-69
 Identities = 155/247 (62%), Positives = 168/247 (68%), Gaps = 18/247 (7%)
 Frame = +1

Query: 1   MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 180
           M DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 181 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE*M 360
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 361 TQIMFELSMLRLCTLQFKRCCRYMHLVEQLVLYWI-----LVME-------*LTPYQSMR 504
           TQIMFE          F     Y+ +   L LY       +VM+        +  Y+   
Sbjct: 121 TQIMFE---------TFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 171

Query: 505 LCSSTCYFEIRSCWRDLTDY**DSY-RRGTVHTQL--KRIVRDIKRTCTSL*L---MQNE 666
           L  +    ++    RDLTDY       RG   T    + IVRDIK     + L    + +
Sbjct: 172 LPHAIMRLDLAG--RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQ 229

Query: 667 TASASSS 687
           TAS SSS
Sbjct: 230 TASTSSS 236

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 40/42 (95%), Positives = 41/42 (97%)
 Frame = +3

Query: 378 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE 503
           TFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYE
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYE 168

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 17/28 (60%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
 Frame = +2

Query: 503 GYALPHAILRLDLAG-EILPIIDEILTD 583
           GYALPHAI+RLDLAG ++   + +ILT+
Sbjct: 169 GYALPHAIMRLDLAGRDLTDYLMKILTE 196
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
          Length = 376

 Score =  258 bits (660), Expect = 8e-69
 Identities = 155/247 (62%), Positives = 168/247 (68%), Gaps = 18/247 (7%)
 Frame = +1

Query: 1   MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 180
           M DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 181 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE*M 360
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 361 TQIMFELSMLRLCTLQFKRCCRYMHLVEQLVLYWI-----LVME-------*LTPYQSMR 504
           TQIMFE          F     Y+ +   L LY       +VM+        +  Y+   
Sbjct: 121 TQIMFE---------TFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYA 171

Query: 505 LCSSTCYFEIRSCWRDLTDY**DSY-RRGTVHTQL--KRIVRDIKRTCTSL*L---MQNE 666
           L  +    ++    RDLTDY       RG   T    + IVRDIK     + L    + +
Sbjct: 172 LPHAIMRLDLAG--RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQ 229

Query: 667 TASASSS 687
           TAS SSS
Sbjct: 230 TASTSSS 236

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 40/42 (95%), Positives = 41/42 (97%)
 Frame = +3

Query: 378 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE 503
           TFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYE
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYE 168

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 17/28 (60%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
 Frame = +2

Query: 503 GYALPHAILRLDLAG-EILPIIDEILTD 583
           GYALPHAI+RLDLAG ++   + +ILT+
Sbjct: 169 GYALPHAIMRLDLAGRDLTDYLMKILTE 196
>sp|O17320|ACT_CRAGI Actin
          Length = 376

 Score =  258 bits (660), Expect = 8e-69
 Identities = 155/246 (63%), Positives = 168/246 (68%), Gaps = 17/246 (6%)
 Frame = +1

Query: 1   MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 180
           M DED+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MGDEDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 181 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE*M 360
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 361 TQIMFELSMLRLCTLQFKRCCRYMHLVEQLVLY-------WIL-----VME*LTPYQSMR 504
           TQIMFE          F     Y+ +   L LY        +L     V   +  Y+   
Sbjct: 121 TQIMFE---------TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYA 171

Query: 505 LCSSTCYFEIRSCWRDLTDY**DSY-RRGTVHTQL--KRIVRDIK-RTC-TSL*LMQNET 669
           L  +    ++    RDLTDY       RG   T    + IVRDIK + C  +L   Q  T
Sbjct: 172 LPHAIMRLDLAG--RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMT 229

Query: 670 ASASSS 687
            +ASSS
Sbjct: 230 TAASSS 235

 Score = 83.6 bits (205), Expect = 5e-16
 Identities = 40/42 (95%), Positives = 42/42 (100%)
 Frame = +3

Query: 378 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE 503
           TFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYE
Sbjct: 127 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE 168

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 17/28 (60%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
 Frame = +2

Query: 503 GYALPHAILRLDLAG-EILPIIDEILTD 583
           GYALPHAI+RLDLAG ++   + +ILT+
Sbjct: 169 GYALPHAIMRLDLAGRDLTDYLMKILTE 196
>sp|P41339|ACTA_LIMPO Actin, acrosomal process isoform (Actin-5)
          Length = 376

 Score =  258 bits (659), Expect = 1e-68
 Identities = 124/126 (98%), Positives = 124/126 (98%)
 Frame = +1

Query: 1   MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 180
           M DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 181 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE*M 360
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 361 TQIMFE 378
           TQIMFE
Sbjct: 121 TQIMFE 126

 Score = 83.2 bits (204), Expect = 6e-16
 Identities = 40/42 (95%), Positives = 41/42 (97%)
 Frame = +3

Query: 378 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE 503
           TFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYE
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYE 168

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 18/28 (64%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
 Frame = +2

Query: 503 GYALPHAILRLDLAG-EILPIIDEILTD 583
           GYALPHAILRLDLAG ++   + +ILT+
Sbjct: 169 GYALPHAILRLDLAGRDLTDYLMKILTE 196
>sp|P92176|ACT2_LUMTE Actin-2
          Length = 376

 Score =  258 bits (659), Expect = 1e-68
 Identities = 155/247 (62%), Positives = 168/247 (68%), Gaps = 18/247 (7%)
 Frame = +1

Query: 1   MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 180
           M++EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MAEEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 181 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE*M 360
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 361 TQIMFELSMLRLCTLQFKRCCRYMHLVEQLVLY-------WIL-----VME*LTPYQSMR 504
           TQIMFE          F     Y+ +   L LY        +L     V   +  Y+   
Sbjct: 121 TQIMFE---------TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYA 171

Query: 505 LCSSTCYFEIRSCWRDLTDY**DSY-RRGTVHTQL--KRIVRDIKRTCTSL*L---MQNE 666
           L  +    ++    RDLTDY       RG   T    + IVRDIK     + L    +  
Sbjct: 172 LPHAILRLDLAG--RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMN 229

Query: 667 TASASSS 687
           TASASSS
Sbjct: 230 TASASSS 236

 Score = 85.1 bits (209), Expect = 2e-16
 Identities = 41/42 (97%), Positives = 42/42 (100%)
 Frame = +3

Query: 378 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE 503
           TFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE
Sbjct: 127 TFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE 168

 Score = 35.8 bits (81), Expect = 0.11
 Identities = 18/28 (64%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
 Frame = +2

Query: 503 GYALPHAILRLDLAG-EILPIIDEILTD 583
           GYALPHAILRLDLAG ++   + +ILT+
Sbjct: 169 GYALPHAILRLDLAGRDLTDYLMKILTE 196
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
          Length = 376

 Score =  258 bits (659), Expect = 1e-68
 Identities = 124/126 (98%), Positives = 124/126 (98%)
 Frame = +1

Query: 1   MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 180
           M DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 181 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE*M 360
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 361 TQIMFE 378
           TQIMFE
Sbjct: 121 TQIMFE 126

 Score = 84.0 bits (206), Expect = 3e-16
 Identities = 40/42 (95%), Positives = 41/42 (97%)
 Frame = +3

Query: 378 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE 503
           TFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYE
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGIVIDSGDGVTHTVPIYE 168

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 17/28 (60%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
 Frame = +2

Query: 503 GYALPHAILRLDLAG-EILPIIDEILTD 583
           GYALPHAI+RLDLAG ++   + +ILT+
Sbjct: 169 GYALPHAIMRLDLAGRDLTDYLMKILTE 196
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
          Length = 376

 Score =  258 bits (659), Expect = 1e-68
 Identities = 124/126 (98%), Positives = 124/126 (98%)
 Frame = +1

Query: 1   MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 180
           M DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 181 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE*M 360
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 361 TQIMFE 378
           TQIMFE
Sbjct: 121 TQIMFE 126

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 41/42 (97%), Positives = 41/42 (97%)
 Frame = +3

Query: 378 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE 503
           TFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE 168

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 17/28 (60%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
 Frame = +2

Query: 503 GYALPHAILRLDLAG-EILPIIDEILTD 583
           GYALPHAI+RLDLAG ++   + +ILT+
Sbjct: 169 GYALPHAIMRLDLAGRDLTDYLMKILTE 196
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
          Length = 376

 Score =  258 bits (659), Expect = 1e-68
 Identities = 124/126 (98%), Positives = 124/126 (98%)
 Frame = +1

Query: 1   MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 180
           M DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 181 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE*M 360
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 361 TQIMFE 378
           TQIMFE
Sbjct: 121 TQIMFE 126

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 41/42 (97%), Positives = 41/42 (97%)
 Frame = +3

Query: 378 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE 503
           TFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE 168

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 17/28 (60%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
 Frame = +2

Query: 503 GYALPHAILRLDLAG-EILPIIDEILTD 583
           GYALPHAI+RLDLAG ++   + +ILT+
Sbjct: 169 GYALPHAIMRLDLAGRDLTDYLMKILTE 196
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
          Length = 376

 Score =  258 bits (659), Expect = 1e-68
 Identities = 124/126 (98%), Positives = 124/126 (98%)
 Frame = +1

Query: 1   MSDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 180
           M DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1   MCDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60

Query: 181 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE*M 360
           SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE M
Sbjct: 61  SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120

Query: 361 TQIMFE 378
           TQIMFE
Sbjct: 121 TQIMFE 126

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 41/42 (97%), Positives = 41/42 (97%)
 Frame = +3

Query: 378 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE 503
           TFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE
Sbjct: 127 TFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYE 168

 Score = 35.0 bits (79), Expect = 0.19
 Identities = 17/28 (60%), Positives = 23/28 (82%), Gaps = 1/28 (3%)
 Frame = +2

Query: 503 GYALPHAILRLDLAG-EILPIIDEILTD 583
           GYALPHAI+RLDLAG ++   + +ILT+
Sbjct: 169 GYALPHAIMRLDLAGRDLTDYLMKILTE 196
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,463,038
Number of Sequences: 369166
Number of extensions: 1793422
Number of successful extensions: 6150
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5306
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6055
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 5879188535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)