Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_023_G04
(724 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q05870|MYSP_SCHJA Paramyosin (Antigen Sj97) 241 1e-63
sp|P06198|MYSP_SCHMA Paramyosin 239 4e-63
sp|P35417|MYSP_ECHGR Paramyosin 222 7e-58
sp|Q8T305|MYSP_TAESA Paramyosin 222 7e-58
sp|P35418|MYSP_TAESO Paramyosin (Antigen B) (AgB) 222 7e-58
sp|O96064|MYSP_MYTGA Paramyosin 173 4e-43
sp|P05661|MYSA_DROME Myosin heavy chain, muscle 139 1e-32
sp|P02565|MYH3_CHICK Myosin heavy chain, fast skeletal musc... 136 6e-32
sp|Q90339|MYSS_CYPCA Myosin heavy chain, fast skeletal muscle 135 1e-31
sp|P13538|MYSS_CHICK Myosin heavy chain, skeletal muscle, a... 133 5e-31
>sp|Q05870|MYSP_SCHJA Paramyosin (Antigen Sj97)
Length = 866
Score = 241 bits (615), Expect = 1e-63
Identities = 126/169 (74%), Positives = 148/169 (87%)
Frame = +3
Query: 3 LEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFER 182
LEIEIREIT+KLEEAEA+ATREG+R +QKLQ R+RELE +F+ E RRCK+ALAQARKFER
Sbjct: 703 LEIEIREITVKLEEAEAFATREGRRMVQKLQARVRELEAEFDGESRRCKDALAQARKFER 762
Query: 183 QFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIED 362
Q+KELQ QA+DDRRMV+ELQDLLDKTQ+KM+AYKRQLEE+E+VS + MNKYRKAQQQIE+
Sbjct: 763 QYKELQTQAEDDRRMVLELQDLLDKTQMKMKAYKRQLEEMEEVSQITMNKYRKAQQQIEE 822
Query: 363 AEHRADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVNTSRGARATSI 509
AEHRADMAER +TVRR G PG RA+SV RE S V ++RG RATS+
Sbjct: 823 AEHRADMAERTVTVRRVG---PGG--RAVSVARELS-VTSNRGMRATSM 865
Score = 41.6 bits (96), Expect = 0.002
Identities = 24/120 (20%), Positives = 55/120 (45%)
Frame = +3
Query: 15 IREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKE 194
I E+T+ + E E E R ++ + + +LE +A + + + + ++ K+
Sbjct: 510 IEELTVTITEMEVKYKSELSRLKKRYESSIADLEIQLDATNKANANLMKENKNLAQRVKD 569
Query: 195 LQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHR 374
L+ DD+RR+ ++ L T+ K ++EE+ + A+ ++E+ + R
Sbjct: 570 LETFLDDERRLREAAENNLQITEHKRIQLANEVEELRSAMENLERLRKHAETELEETQSR 629
>sp|P06198|MYSP_SCHMA Paramyosin
Length = 866
Score = 239 bits (611), Expect = 4e-63
Identities = 126/169 (74%), Positives = 148/169 (87%)
Frame = +3
Query: 3 LEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFER 182
LEIEIREIT+KLEEAEA ATREG+R +QKLQ R+RELE++F+ E RRCK+ALAQARKFER
Sbjct: 703 LEIEIREITVKLEEAEASATREGRRMVQKLQARVRELESEFDGESRRCKDALAQARKFER 762
Query: 183 QFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIED 362
Q+KELQ QA+DDRRMV+ELQDLLDKTQ+KM+AYKRQLEE+E+VS + MNKYRKAQQQIE+
Sbjct: 763 QYKELQTQAEDDRRMVLELQDLLDKTQMKMKAYKRQLEEMEEVSQITMNKYRKAQQQIEE 822
Query: 363 AEHRADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVNTSRGARATSI 509
AEHRADMAER +TVRR G PG RA+SV RE S V ++RG RATS+
Sbjct: 823 AEHRADMAERTVTVRRVG---PGG--RAVSVARELS-VTSNRGMRATSM 865
Score = 42.0 bits (97), Expect = 0.002
Identities = 24/120 (20%), Positives = 55/120 (45%)
Frame = +3
Query: 15 IREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKE 194
I E+T+ + E E E R ++ + + +LE + + + + + ++ K+
Sbjct: 510 IEELTVTITEMEVKYKSELSRLKKRYESNIADLEIQLDTANKANANLMKENKNLSQRVKD 569
Query: 195 LQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHR 374
L+ D++RR+ ++ L T+ K ++EEI + A+ ++E+A+ R
Sbjct: 570 LETFLDEERRLREAAENNLQITEHKRLQLANEIEEIRSTLENLERLRKHAETELEEAQSR 629
>sp|P35417|MYSP_ECHGR Paramyosin
Length = 863
Score = 222 bits (566), Expect = 7e-58
Identities = 117/169 (69%), Positives = 143/169 (84%)
Frame = +3
Query: 3 LEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFER 182
LEIEIREIT+KLEEAEA+ATREG+R +QKLQ R+RELE + + E RR KEA A ARK+ER
Sbjct: 699 LEIEIREITVKLEEAEAFATREGRRMVQKLQNRVRELEAELDGEIRRAKEAFASARKYER 758
Query: 183 QFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIED 362
QFKELQ Q++DD+RM++ELQDLLDKTQ+KM+AYKRQLEE E+VS + M+KYRKAQQQIE+
Sbjct: 759 QFKELQTQSEDDKRMILELQDLLDKTQIKMKAYKRQLEEQEEVSQLTMSKYRKAQQQIEE 818
Query: 363 AEHRADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVNTSRGARATSI 509
AEHRADMAER +T++R + G RA+SVVRE ++V SRG RATSI
Sbjct: 819 AEHRADMAERTITIKR---TIGGPGSRAVSVVREINSV--SRGNRATSI 862
Score = 41.2 bits (95), Expect = 0.003
Identities = 26/120 (21%), Positives = 52/120 (43%)
Frame = +3
Query: 15 IREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKE 194
I E+T + E E + R +K + + ELE + + + + ++ +E
Sbjct: 506 IEELTTTISEMEVRFKSDMSRLKKKYEATISELEVQLDVANKANASLNRENKALAQRVQE 565
Query: 195 LQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHR 374
LQ +D+RR + L ++ K A ++EEI ++ + A+ ++ DA R
Sbjct: 566 LQTALEDERRAREAAESNLQVSERKRIALTSEVEEIRSQLELSDRARKNAESELNDANGR 625
>sp|Q8T305|MYSP_TAESA Paramyosin
Length = 863
Score = 222 bits (566), Expect = 7e-58
Identities = 117/169 (69%), Positives = 143/169 (84%)
Frame = +3
Query: 3 LEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFER 182
LEIEIREIT+KLEEAEA+ATREG+R +QKLQ R+RELE + + E RR KEA A ARK+ER
Sbjct: 699 LEIEIREITVKLEEAEAFATREGRRMVQKLQNRVRELEAELDGEIRRAKEAFANARKYER 758
Query: 183 QFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIED 362
QFKELQ Q++DD+RM++ELQDLLDKTQ+KM+AYKRQLEE E+VS + M+KYRKAQQQIE+
Sbjct: 759 QFKELQTQSEDDKRMILELQDLLDKTQIKMKAYKRQLEEQEEVSQLTMSKYRKAQQQIEE 818
Query: 363 AEHRADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVNTSRGARATSI 509
AEHRADMAER +T++R + G RA+SVVRE ++V SRG RATSI
Sbjct: 819 AEHRADMAERTITIKR---TIGGPGSRAVSVVREINSV--SRGNRATSI 862
Score = 41.2 bits (95), Expect = 0.003
Identities = 26/120 (21%), Positives = 52/120 (43%)
Frame = +3
Query: 15 IREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKE 194
I E+T + E E + R +K + + ELE + + + + ++ +E
Sbjct: 506 IEELTTTISEMEVRFKSDMSRLKKKYEATISELEVQLDVANKANANLNRENKTLAQRVQE 565
Query: 195 LQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHR 374
LQ +D+RR + L ++ K A ++EEI ++ + A+ ++ DA R
Sbjct: 566 LQAALEDERRAREAAESNLQVSERKRIALASEVEEIRSQLELSDRARKNAESELNDANGR 625
>sp|P35418|MYSP_TAESO Paramyosin (Antigen B) (AgB)
Length = 863
Score = 222 bits (566), Expect = 7e-58
Identities = 117/169 (69%), Positives = 143/169 (84%)
Frame = +3
Query: 3 LEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFER 182
LEIEIREIT+KLEEAEA+ATREG+R +QKLQ R+RELE + + E RR KEA A ARK+ER
Sbjct: 699 LEIEIREITVKLEEAEAFATREGRRMVQKLQNRVRELEAELDGEIRRAKEAFANARKYER 758
Query: 183 QFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIED 362
QFKELQ Q++DD+RM++ELQDLLDKTQ+KM+AYKRQLEE E+VS + M+KYRKAQQQIE+
Sbjct: 759 QFKELQTQSEDDKRMILELQDLLDKTQIKMKAYKRQLEEQEEVSQLTMSKYRKAQQQIEE 818
Query: 363 AEHRADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVNTSRGARATSI 509
AEHRADMAER +T++R + G RA+SVVRE ++V SRG RATSI
Sbjct: 819 AEHRADMAERTITIKR---TIGGPGSRAVSVVREINSV--SRGNRATSI 862
Score = 40.8 bits (94), Expect = 0.004
Identities = 26/120 (21%), Positives = 52/120 (43%)
Frame = +3
Query: 15 IREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKE 194
I E+T + E E + R +K + + ELE + + + + ++ +E
Sbjct: 506 IEELTTTISEMEVRFKSDMSRLKKKYEATISELEVQLDVANKANVNLNRENKTLAQRVQE 565
Query: 195 LQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHR 374
LQ +D+RR + L ++ K A ++EEI ++ + A+ ++ DA R
Sbjct: 566 LQAALEDERRAREAAESNLQVSERKRIALASEVEEIRSQLELSDRARKNAESELNDANGR 625
>sp|O96064|MYSP_MYTGA Paramyosin
Length = 864
Score = 173 bits (439), Expect = 4e-43
Identities = 92/159 (57%), Positives = 119/159 (74%), Gaps = 1/159 (0%)
Frame = +3
Query: 3 LEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFER 182
LEIEIREIT++LEEAEA+A REGKR I KLQ R+R+LE + EA+QRR +EA A ARKFER
Sbjct: 712 LEIEIREITVRLEEAEAFAQREGKRQIAKLQARIRDLENELEADQRRLREAAASARKFER 771
Query: 183 QFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIED 362
Q+KE Q +D+DRR V EL + D+ +K + YKR +EE EDV+++ MNKYRKAQ I++
Sbjct: 772 QWKETVQASDEDRRQVAELTSITDQLTMKCKTYKRMIEEAEDVASITMNKYRKAQSLIDE 831
Query: 363 AEHRADMAERHL-TVRRAGSVMPGSTYRAISVVRETSTV 476
AE RADMAE++L TVRR+ R++SV RE + V
Sbjct: 832 AEQRADMAEKNLQTVRRS---------RSMSVSREVTRV 861
Score = 47.8 bits (112), Expect = 3e-05
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Frame = +3
Query: 3 LEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFER 182
+E +RE K EE ++ + RAI +LQ L E+ET ++ E R K +K+E
Sbjct: 497 MEQRLRE---KDEEIDSIR-KSSARAIDELQRTLVEVETRYKTEISRIK------KKYET 546
Query: 183 QFKELQQQADDDRRMVVE-------LQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRK 341
+EL+ D+ R E LQ+ + +L++ RQL++ + +V+ K
Sbjct: 547 DIRELEGALDNANRANAEYLKQIKSLQNRNRELELQLEEATRQLDDTRNQLSVSERKRIT 606
Query: 342 AQQQIEDAEHRADMAER 392
QQ++EDA + AER
Sbjct: 607 IQQELEDARSLLEHAER 623
Score = 40.0 bits (92), Expect = 0.006
Identities = 33/127 (25%), Positives = 56/127 (44%)
Frame = +3
Query: 6 EIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQ 185
E +IRE+ L+ A A E + I+ LQ R RELE E R+ + Q ER+
Sbjct: 545 ETDIRELEGALDNANR-ANAEYLKQIKSLQNRNRELELQLEEATRQLDDTRNQLSVSERK 603
Query: 186 FKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDA 365
+QQ+ +D R ++ + + ++ +L E++ T N R+ + I
Sbjct: 604 RITIQQELEDARSLLEHAERARKNAENELGEVTVRLTEVQLQVTALTNDKRRMEADIAAM 663
Query: 366 EHRADMA 386
+ D A
Sbjct: 664 QSDLDDA 670
Score = 38.1 bits (87), Expect = 0.024
Identities = 36/151 (23%), Positives = 63/151 (41%), Gaps = 14/151 (9%)
Frame = +3
Query: 3 LEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFER 182
L +EIREITI+LE + +Q L R R+LE + A Q+RC + A+ +
Sbjct: 346 LTVEIREITIELENTQI--------IVQDLTKRNRQLENENAALQKRCDDLSAENGQLRN 397
Query: 183 QFKELQQQ-----------ADDDRRMVVE---LQDLLDKTQLKMRAYKRQLEEIEDVSTV 320
+ L+ + A+ + + E LQ+ L + +++A R + E+ +
Sbjct: 398 EKANLEAECARLKVANAELAEKNANLERENAGLQNALREANNELKAANRTINELTALKAQ 457
Query: 321 AMNKYRKAQQQIEDAEHRADMAERHLTVRRA 413
+ + D E AE L +A
Sbjct: 458 LEAERDNLASALRDTEEALRDAEAKLAAAQA 488
>sp|P05661|MYSA_DROME Myosin heavy chain, muscle
Length = 1962
Score = 139 bits (349), Expect = 1e-32
Identities = 78/170 (45%), Positives = 115/170 (67%)
Frame = +3
Query: 3 LEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFER 182
LE +I+E+ ++L+EAEA A + GK+AIQKL+ R+RELE + + EQRR +A RK ER
Sbjct: 1785 LEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQRRHADAQKNLRKSER 1844
Query: 183 QFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIED 362
+ KEL Q+++DR+ +QDL+DK Q K++ YKRQ+EE E+++ + + K+RKAQQ++E+
Sbjct: 1845 RVKELSFQSEEDRKNHERMQDLVDKLQQKIKTYKRQIEEAEEIAALNLAKFRKAQQELEE 1904
Query: 363 AEHRADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVNTSRGARATSIR 512
AE RAD+AE+ ++ RA RA SV R S RATS+R
Sbjct: 1905 AEERADLAEQAISKFRAKG-------RAGSVGR-----GASPAPRATSVR 1942
Score = 50.1 bits (118), Expect = 6e-06
Identities = 28/111 (25%), Positives = 58/111 (52%)
Frame = +3
Query: 42 EAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDR 221
EAEA E R +KL+ + ELE + + EA +++++Q K++Q ++++
Sbjct: 1601 EAEAKGKAEALRMKKKLEADINELEIALDHANKANAEAQKNIKRYQQQLKDIQTALEEEQ 1660
Query: 222 RMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHR 374
R + ++ L ++ + A + +LEE + A R+A+Q++ DA +
Sbjct: 1661 RARDDAREQLGISERRANALQNELEESRTLLEQADRGRRQAEQELADAHEQ 1711
Score = 48.9 bits (115), Expect = 1e-05
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 2/129 (1%)
Frame = +3
Query: 12 EIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFK 191
E+ IT KLE+ + + +R I++LQ R+ ELE + EAE++ +A Q R+ +
Sbjct: 1085 ELSSITAKLEDEQVVVLKH-QRQIKELQARIEELEEEVEAERQARAKAEKQRADLARELE 1143
Query: 192 ELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE--IEDVSTVAMNKYRKAQQQIEDA 365
EL ++ ++ +L K + ++ +R LEE I+ ST+A N +K + +
Sbjct: 1144 ELGERLEEAGGATSAQIELNKKREAELSKLRRDLEEANIQHESTLA-NLRKKHNDAVAEM 1202
Query: 366 EHRADMAER 392
+ D +
Sbjct: 1203 AEQVDQLNK 1211
Score = 41.2 bits (95), Expect = 0.003
Identities = 40/164 (24%), Positives = 66/164 (40%), Gaps = 28/164 (17%)
Frame = +3
Query: 3 LEIEIREITIKLEEAEAYATREGKRAI----------QKLQVRLRELETDFE-------- 128
LE E E+ LEEAEA +E + + Q++ R++E E +FE
Sbjct: 1532 LEAEKDELQAALEEAEAALEQEENKVLRAQLELSQVRQEIDRRIQEKEEEFENTRKNHQR 1591
Query: 129 ----------AEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRA 278
AE + EAL +K E EL+ D + E Q ++
Sbjct: 1592 ALDSMQASLEAEAKGKAEALRMKKKLEADINELEIALDHANKANAE-------AQKNIKR 1644
Query: 279 YKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRR 410
Y++QL++I+ A++Q+ +E RA+ + L R
Sbjct: 1645 YQQQLKDIQTALEEEQRARDDAREQLGISERRANALQNELEESR 1688
>sp|P02565|MYH3_CHICK Myosin heavy chain, fast skeletal muscle, embryonic
Length = 1940
Score = 136 bits (342), Expect = 6e-32
Identities = 66/139 (47%), Positives = 103/139 (74%)
Frame = +3
Query: 3 LEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFER 182
L+ ++++ +L+EAE A + GK+ IQKL+ R+RELE + +AEQ+R EA+ RK+ER
Sbjct: 1791 LDQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVRELEGEVDAEQKRSAEAVKGVRKYER 1850
Query: 183 QFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIED 362
+ KEL Q+++DR+ V+ LQDL+DK Q+K+++YKRQ EE E++S V ++K+RK Q ++E+
Sbjct: 1851 RVKELTYQSEEDRKNVLRLQDLVDKLQMKVKSYKRQAEEAEELSNVNLSKFRKIQHELEE 1910
Query: 363 AEHRADMAERHLTVRRAGS 419
AE RAD+AE + RA S
Sbjct: 1911 AEERADIAESQVNKLRAKS 1929
Score = 44.7 bits (104), Expect = 3e-04
Identities = 30/123 (24%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Frame = +3
Query: 6 EIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQ 185
+ EI +I K+E+ +A + K+ I++LQ R+ ELE + EAE+ +A R+
Sbjct: 1089 DFEISQIQSKIEDEQALGMQLQKK-IKELQARIEELEEEIEAERTSRAKAEKHRADLSRE 1147
Query: 186 FKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE--IEDVSTVAMNKYRKAQQQIE 359
+E+ ++ ++ D+ K + + + +R LEE ++ +T A + + A +
Sbjct: 1148 LEEISERLEEAGGATAAQIDMNKKREAEFQKMRRDLEEATLQHEATAAALRKKHADSTAD 1207
Query: 360 DAE 368
E
Sbjct: 1208 VGE 1210
Score = 33.5 bits (75), Expect = 0.59
Identities = 23/105 (21%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Frame = +3
Query: 12 EIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAE-------QRRCKEALAQAR 170
E + +L ++EA ++ + LQ + +L+ +AE + RC + +
Sbjct: 860 EFEKTKEELAKSEAKRKELEEKMVSLLQEK-NDLQLQVQAEADGLADAEERCDQLIKTKI 918
Query: 171 KFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIE 305
+ E + KEL ++A+D+ M EL K + + K+ ++++E
Sbjct: 919 QLEAKIKELTERAEDEEEMNAELTAKKRKLEDECSELKKDIDDLE 963
Score = 32.7 bits (73), Expect = 1.0
Identities = 18/98 (18%), Positives = 46/98 (46%)
Frame = +3
Query: 87 KLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQL 266
+L++ + +L ++ E+ + R E Q E++ + ++ +R + ++ + Q
Sbjct: 1228 ELKMEIDDLASNMESVSKAKANLEKMCRSLEDQLSEIKTKEEEQQRTINDISAQKARLQT 1287
Query: 267 KMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRAD 380
+ Y RQ+EE + + + + QQIE+ + +
Sbjct: 1288 ESGEYSRQVEEKDALISQLSRGKQAFTQQIEELKRHLE 1325
>sp|Q90339|MYSS_CYPCA Myosin heavy chain, fast skeletal muscle
Length = 1935
Score = 135 bits (340), Expect = 1e-31
Identities = 64/139 (46%), Positives = 101/139 (72%)
Frame = +3
Query: 3 LEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFER 182
LE+ ++++ +L+EAE+ A + GK+ +QKL+ R+RELE + EAEQRR +A+ RK+ER
Sbjct: 1787 LEVTVKDLQHRLDEAESLAMKGGKKQLQKLESRVRELEAEVEAEQRRGADAVKGVRKYER 1846
Query: 183 QFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIED 362
+ KEL Q ++D++ V+ LQDL+DK QLK++ YKRQ EE E+ + +++YRK Q ++E+
Sbjct: 1847 RVKELTYQTEEDKKNVIRLQDLVDKLQLKVKVYKRQAEEAEEQTNTHLSRYRKVQHELEE 1906
Query: 363 AEHRADMAERHLTVRRAGS 419
A+ RAD+AE + RA S
Sbjct: 1907 AQERADVAESQVNKLRAKS 1925
Score = 42.4 bits (98), Expect = 0.001
Identities = 28/123 (22%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Frame = +3
Query: 6 EIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQ 185
+ EI ++ K+E+ ++ + K+ I++LQ R+ ELE + EAE+ + Q R+
Sbjct: 1085 DFEISQLLSKIEDEQSLGAQLQKK-IKELQARIEELEEEIEAERAARAKVEKQRADLSRE 1143
Query: 186 FKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE--IEDVSTVAMNKYRKAQQQIE 359
+E+ ++ ++ ++ K + + + +R LEE ++ +T A + +A E
Sbjct: 1144 LEEISERLEEAGGATAAQIEMNKKREAEFQKMRRDLEESTLQHEATAAALRKEQADSVAE 1203
Query: 360 DAE 368
E
Sbjct: 1204 LGE 1206
Score = 34.7 bits (78), Expect = 0.27
Identities = 28/126 (22%), Positives = 61/126 (48%)
Frame = +3
Query: 6 EIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQ 185
++EI ++T +E A A A ++ + L+ +L E++T + R+ + AQ + + +
Sbjct: 1226 KMEIDDLTSNME-AVAKAKANLEKMCRTLEDQLSEIKTKSDENVRQLNDMNAQRARLQTE 1284
Query: 186 FKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDA 365
E +Q ++ +V +L T+ K +AY +Q+EE++ + ++ A
Sbjct: 1285 NGEFSRQLEEKEALVSQL------TRGK-QAYTQQIEELKRHIEEEVKAKNALAHAVQSA 1337
Query: 366 EHRADM 383
H D+
Sbjct: 1338 RHDCDL 1343
>sp|P13538|MYSS_CHICK Myosin heavy chain, skeletal muscle, adult
Length = 1939
Score = 133 bits (334), Expect = 5e-31
Identities = 61/135 (45%), Positives = 100/135 (74%)
Frame = +3
Query: 15 IREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKE 194
++++ ++L+EAE A + GK+ +QKL+ R+RELE + ++EQ+R EA+ RK+ER+ KE
Sbjct: 1793 VKDLHVRLDEAEQLALKGGKKQLQKLEARVRELEGEVDSEQKRSAEAVKGVRKYERRVKE 1852
Query: 195 LQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHR 374
L Q ++DR+ ++ LQDL+DK Q+K+++YKRQ EE E++S V ++K+RK Q ++E+AE R
Sbjct: 1853 LTYQCEEDRKNILRLQDLVDKLQMKVKSYKRQAEEAEELSNVNLSKFRKIQHELEEAEER 1912
Query: 375 ADMAERHLTVRRAGS 419
AD+AE + R S
Sbjct: 1913 ADIAESQVNKLRVKS 1927
Score = 43.9 bits (102), Expect = 4e-04
Identities = 30/123 (24%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Frame = +3
Query: 6 EIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQ 185
+ EI +I K+E+ +A + K+ I++LQ R+ ELE + EAE+ +A R+
Sbjct: 1087 DFEISQIQSKIEDEQALGMQLQKK-IKELQARIEELEEEIEAERTSRAKAEKHRADLSRE 1145
Query: 186 FKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE--IEDVSTVAMNKYRKAQQQIE 359
+E+ ++ ++ ++ K + + + +R LEE ++ +T A + + A E
Sbjct: 1146 LEEISERLEEAGGATAAQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRKKHADSTAE 1205
Query: 360 DAE 368
E
Sbjct: 1206 LGE 1208
Score = 34.3 bits (77), Expect = 0.35
Identities = 20/98 (20%), Positives = 46/98 (46%)
Frame = +3
Query: 87 KLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQL 266
+L++ + +L ++ E+ + R E Q E++ + + ++RM+ +L + Q
Sbjct: 1226 ELKMEIDDLASNMESVSKAKANLEKMCRTLEDQLSEIKTKEEQNQRMINDLNTQRARLQT 1285
Query: 267 KMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRAD 380
+ Y RQ EE + + + + QQIE+ + +
Sbjct: 1286 ETGEYSRQAEEKDALISQLSRGKQGFTQQIEELKRHLE 1323
Score = 32.0 bits (71), Expect = 1.7
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Frame = +3
Query: 33 KLEEAEAYATREGKRAIQKLQVRLRE-----LETDFEAE-----QRRCKEALAQARKFER 182
K +E A + + K +K+ V L+E L+ EA+ + RC + + + E
Sbjct: 861 KTKEELAKSEAKRKELEEKMVVLLQEKNDLQLQVQAEADSLADAEERCDQLIKTKIQLEA 920
Query: 183 QFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIE 305
+ KE+ ++A+D+ + EL K + + K+ ++++E
Sbjct: 921 KIKEVTERAEDEEEINAELTAKKRKLEDECSELKKDIDDLE 961
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,230,412
Number of Sequences: 369166
Number of extensions: 974985
Number of successful extensions: 4769
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4629
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6462248555
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)