Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_023_E14
(872 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cy... 424 e-118
sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cy... 422 e-118
sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cyto... 422 e-118
sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cy... 421 e-117
sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cy... 418 e-116
sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cy... 413 e-115
sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP... 407 e-113
sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mi... 406 e-113
sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mi... 405 e-112
sp|P21642|PPCKM_CHICK Phosphoenolpyruvate carboxykinase, mi... 377 e-104
>sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 424 bits (1089), Expect = e-118
Identities = 205/289 (70%), Positives = 234/289 (80%)
Frame = +3
Query: 6 MKSLTKYENCWLVRTDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDME 185
++ L KY+NCWL TDP DVAR+ESKT I T+ +R T+P Q LG WMSE D E
Sbjct: 66 LRRLKKYDNCWLALTDPRDVARIESKTVIVTQEQRDTVPIPKTGLSQ--LGRWMSEEDFE 123
Query: 186 AALNDRFPGCMKGRTMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLES 365
A N RFPGCMKGRTMYVIPFSMGP+G PLSKIGIELTDSPYVV SM+IMTRMG VLE+
Sbjct: 124 KAFNARFPGCMKGRTMYVIPFSMGPLGSPLSKIGIELTDSPYVVASMRIMTRMGTPVLEA 183
Query: 366 MTDSTPFVKALHSVGVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLG 545
+ D FVK LHSVG PLP ++ ++N WPCNPE TLIAH+P + EI SFGSGYGGNSLLG
Sbjct: 184 LGDGE-FVKCLHSVGCPLPLQKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLG 242
Query: 546 KKCFALRLGSILARDEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPG 725
KKCFALR+ S LA++E W AEHMLILG+T P GEK Y+ AAFPSACGKTNLAM+ P++PG
Sbjct: 243 KKCFALRMASRLAKEEGWLAEHMLILGITNPEGEKKYLAAAFPSACGKTNLAMMNPSLPG 302
Query: 726 YKVECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTSHSTNPNAMKCI 872
+KVECVGDDIAWMKFD++G LRAINPE GFFGVAPGTS TNPNA+K I
Sbjct: 303 WKVECVGDDIAWMKFDAQGHLRAINPENGFFGVAPGTSVKTNPNAIKTI 351
>sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 422 bits (1086), Expect = e-118
Identities = 205/289 (70%), Positives = 234/289 (80%)
Frame = +3
Query: 6 MKSLTKYENCWLVRTDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDME 185
++ L KY+NCWL TDP DVAR+ SKT I T+ +R T+P Q LG WMSE D E
Sbjct: 66 LRRLKKYDNCWLALTDPRDVARIGSKTVIVTQEQRDTVPIPKTGLSQ--LGRWMSEEDFE 123
Query: 186 AALNDRFPGCMKGRTMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLES 365
ALN RFPGCMKGRTMYVIPFSMGP+G PLSKIGIELTDSPYVV SM+IMTRMG VLE+
Sbjct: 124 KALNARFPGCMKGRTMYVIPFSMGPLGSPLSKIGIELTDSPYVVASMRIMTRMGTPVLEA 183
Query: 366 MTDSTPFVKALHSVGVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLG 545
+ D FVK LHSVG PLP ++ ++N WPCNPE TLIAH+P + EI SFGSGYGGNSLLG
Sbjct: 184 LGDGE-FVKCLHSVGCPLPLQKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLG 242
Query: 546 KKCFALRLGSILARDEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPG 725
KKCFALR+ S LA++E W AEHMLILG+T P GEK Y+ AAFPSACGKTNLAM+ P++PG
Sbjct: 243 KKCFALRMASRLAKEEGWLAEHMLILGITNPEGEKKYLAAAFPSACGKTNLAMMNPSLPG 302
Query: 726 YKVECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTSHSTNPNAMKCI 872
+KVECVGDDIAWMKFD++G LRAINPE GFFGVAPGTS TNPNA+K I
Sbjct: 303 WKVECVGDDIAWMKFDAQGHLRAINPENGFFGVAPGTSVKTNPNAIKTI 351
>sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 422 bits (1085), Expect = e-118
Identities = 202/289 (69%), Positives = 235/289 (81%)
Frame = +3
Query: 6 MKSLTKYENCWLVRTDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDME 185
++ L KY+NCWL TDP DVAR+ESKT I T+ +R T+P Q +LG WMSE D E
Sbjct: 66 IRKLKKYDNCWLALTDPRDVARIESKTVIITQEQRDTVPIPKSG--QSQLGRWMSEEDFE 123
Query: 186 AALNDRFPGCMKGRTMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLES 365
A N RFPGCMKGRTMYVIPFSMGP+G PL+KIGIELTDSPYVV SM+IMTRMG VLE+
Sbjct: 124 KAFNARFPGCMKGRTMYVIPFSMGPLGSPLAKIGIELTDSPYVVASMRIMTRMGTSVLEA 183
Query: 366 MTDSTPFVKALHSVGVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLG 545
+ D F+K LHSVG PLP ++ ++N W CNPE TLIAH+P + EI SFGSGYGGNSLLG
Sbjct: 184 LGDGE-FIKCLHSVGCPLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLG 242
Query: 546 KKCFALRLGSILARDEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPG 725
KKCFALR+ S LA++E W AEHMLILG+T P G+K Y+ AAFPSACGKTNLAM+ PT+PG
Sbjct: 243 KKCFALRIASRLAKEEGWLAEHMLILGITNPEGKKKYLAAAFPSACGKTNLAMMNPTLPG 302
Query: 726 YKVECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTSHSTNPNAMKCI 872
+KVECVGDDIAWMKFD++G+LRAINPE GFFGVAPGTS TNPNA+K I
Sbjct: 303 WKVECVGDDIAWMKFDAQGNLRAINPENGFFGVAPGTSVKTNPNAIKTI 351
>sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 421 bits (1083), Expect = e-117
Identities = 205/289 (70%), Positives = 233/289 (80%)
Frame = +3
Query: 6 MKSLTKYENCWLVRTDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDME 185
+K L KY+NCWL TDP DVAR+ESKT I T+ +R T+P + Q LG WMSE D E
Sbjct: 66 IKRLKKYDNCWLALTDPRDVARIESKTVIITREQRDTVPIPKNGLSQ--LGRWMSEEDFE 123
Query: 186 AALNDRFPGCMKGRTMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLES 365
A N RFPGCMKGRTMYVIPFSMGP+G PLSKIGIELTDSPYVV SM+IMTRMG VLE+
Sbjct: 124 KAFNIRFPGCMKGRTMYVIPFSMGPLGSPLSKIGIELTDSPYVVTSMRIMTRMGTSVLEA 183
Query: 366 MTDSTPFVKALHSVGVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLG 545
+ D FVK LHSVG PLP ++ ++N W CNPE TLIAH+P + EI SFGSGYGGNSLLG
Sbjct: 184 LGDGE-FVKCLHSVGCPLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLG 242
Query: 546 KKCFALRLGSILARDEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPG 725
KKCFALR+ S LA++E W AEHMLILG+T P G+K Y AAFPSACGKTNLAM+ PT+PG
Sbjct: 243 KKCFALRMASRLAKEEGWLAEHMLILGITNPKGQKKYFAAAFPSACGKTNLAMMNPTLPG 302
Query: 726 YKVECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTSHSTNPNAMKCI 872
+KVECVGDDIAWMKFD +G+LRAINPE GFFGVAPGTS TNPNA+K I
Sbjct: 303 WKVECVGDDIAWMKFDQQGNLRAINPENGFFGVAPGTSVRTNPNAIKTI 351
>sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 418 bits (1074), Expect = e-116
Identities = 201/289 (69%), Positives = 234/289 (80%)
Frame = +3
Query: 6 MKSLTKYENCWLVRTDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDME 185
++ L KY+NCWL TDP DVAR+ESKT I T+ +R T+P Q LG WMSE D E
Sbjct: 66 IRKLKKYDNCWLALTDPRDVARIESKTVIITQEQRDTVPIPKTGLSQ--LGRWMSEEDFE 123
Query: 186 AALNDRFPGCMKGRTMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLES 365
A N RFPGCMKGRTMYVIPFSMGP+G PL+KIGIELTDSPYVV SM+IMTRMG VLE+
Sbjct: 124 KAFNARFPGCMKGRTMYVIPFSMGPLGSPLAKIGIELTDSPYVVASMRIMTRMGISVLEA 183
Query: 366 MTDSTPFVKALHSVGVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLG 545
+ D F+K LHSVG PLP ++ ++N W CNPE TLIAH+P + EI SFGSGYGGNSLLG
Sbjct: 184 LGDGE-FIKCLHSVGCPLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLG 242
Query: 546 KKCFALRLGSILARDEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPG 725
KKCFALR+ S LA++E W AEHMLILG+T P G+K Y+ AAFPSACGKTNLAM+ P++PG
Sbjct: 243 KKCFALRIASRLAKEEGWLAEHMLILGITNPEGKKKYLAAAFPSACGKTNLAMMNPSLPG 302
Query: 726 YKVECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTSHSTNPNAMKCI 872
+KVECVGDDIAWMKFD++G+LRAINPE GFFGVAPGTS TNPNA+K I
Sbjct: 303 WKVECVGDDIAWMKFDAQGNLRAINPENGFFGVAPGTSVKTNPNAIKTI 351
>sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 413 bits (1061), Expect = e-115
Identities = 201/289 (69%), Positives = 230/289 (79%)
Frame = +3
Query: 6 MKSLTKYENCWLVRTDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDME 185
+K L+KYENCWL T+P DVAR+ESKT I T+ +R TIP Q LG WMSE D E
Sbjct: 66 IKKLSKYENCWLALTNPRDVARIESKTVIITQEQRDTIPIPKTGSSQ--LGRWMSEEDFE 123
Query: 186 AALNDRFPGCMKGRTMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLES 365
A N RFPGCM+GRTMYVIPFSMGPIG PL+KIGIELTDSPYVV SM++MTRMG L++
Sbjct: 124 KAFNTRFPGCMQGRTMYVIPFSMGPIGSPLAKIGIELTDSPYVVASMRMMTRMGTAALKA 183
Query: 366 MTDSTPFVKALHSVGVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLG 545
+ + FVK LHSVG PLP + +IN WPCNPE TLIAH+P + EI SFGSGYGGNSLLG
Sbjct: 184 LGNGE-FVKCLHSVGCPLPLKEPLINNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLG 242
Query: 546 KKCFALRLGSILARDEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPG 725
KKCFALR+ S +A++E W AEHMLILG+T P GEK Y AAFPSACGKTNLAM+ P+ PG
Sbjct: 243 KKCFALRIASRIAKEEGWLAEHMLILGITNPEGEKKYFAAAFPSACGKTNLAMMNPSRPG 302
Query: 726 YKVECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTSHSTNPNAMKCI 872
+K+ECVGDDIAWMKFD G+LRAINPE GFFGVAPGTS TNPNA+K I
Sbjct: 303 WKIECVGDDIAWMKFDELGNLRAINPENGFFGVAPGTSIKTNPNAIKTI 351
>sp|P20007|PPCK_DROME Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 647
Score = 407 bits (1046), Expect = e-113
Identities = 198/286 (69%), Positives = 229/286 (80%)
Frame = +3
Query: 15 LTKYENCWLVRTDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAAL 194
L KY+NCWL RT+PADVARVES+TFI T+ + TIP T ++G LGNW+S SDM+AA+
Sbjct: 94 LPKYDNCWLARTNPADVARVESRTFICTERREETIP-TPVEGVKGTLGNWISPSDMDAAV 152
Query: 195 NDRFPGCMKGRTMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTD 374
RFPGCMKGRTMYV+PFSMGP+G PLSKIGIELTDS YVV SM+IMTRMG VL +
Sbjct: 153 QQRFPGCMKGRTMYVVPFSMGPVGSPLSKIGIELTDSAYVVASMRIMTRMGAAVLRQLAK 212
Query: 375 STPFVKALHSVGVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKC 554
FV+ALHSVG P + + WPC+PE+T+I H PA+N I S+GSGYGGNSLLGKKC
Sbjct: 213 KEEFVRALHSVGAPANGQVEQPS-WPCDPERTIILHKPAENLIVSYGSGYGGNSLLGKKC 271
Query: 555 FALRLGSILARDEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPGYKV 734
FALR+GS +A+ E W AEHMLILG+T P GEK YITAAFPSACGKTNLAM+ P++ YKV
Sbjct: 272 FALRIGSTIAKQEGWLAEHMLILGITDPKGEKKYITAAFPSACGKTNLAMLNPSLANYKV 331
Query: 735 ECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTSHSTNPNAMKCI 872
ECVGDDIAWMKFDS+G LRAINPE GFFGVAPGTS TNP AM +
Sbjct: 332 ECVGDDIAWMKFDSQGVLRAINPENGFFGVAPGTSMETNPIAMNTV 377
>sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 406 bits (1044), Expect = e-113
Identities = 195/289 (67%), Positives = 231/289 (79%)
Frame = +3
Query: 6 MKSLTKYENCWLVRTDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDME 185
++ L KY NCWL RTDP DVARVESKT I T +R T+P +G+LGNWMS +D +
Sbjct: 83 IRKLPKYNNCWLARTDPKDVARVESKTVIVTPSQRDTVP-LPPGGARGQLGNWMSPADFQ 141
Query: 186 AALNDRFPGCMKGRTMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLES 365
A+++RFPGCM+GRTMYV+PFSMGP+G PLS+IG++LTDS YVV SM+IMTR+G VL++
Sbjct: 142 RAVDERFPGCMQGRTMYVLPFSMGPVGSPLSRIGVQLTDSAYVVASMRIMTRLGTPVLQA 201
Query: 366 MTDSTPFVKALHSVGVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLG 545
+ D FVK LHSVG PL + ++ WPCNPEKTLI H+P + EI SFGSGYGGNSLLG
Sbjct: 202 LGDGD-FVKCLHSVGQPLTGQGEPVSQWPCNPEKTLIGHVPDQREIISFGSGYGGNSLLG 260
Query: 546 KKCFALRLGSILARDEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPG 725
KKCFALR+ S LARDE W AEHMLILG+T P G+K AAFPSACGKTNLAM+ P +PG
Sbjct: 261 KKCFALRIASRLARDEGWLAEHMLILGITSPAGKKALCAAAFPSACGKTNLAMMRPALPG 320
Query: 726 YKVECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTSHSTNPNAMKCI 872
+KVECVGDDIAWM+FDS+G LRAINPE GFFGVAPGTS +TNPNAM I
Sbjct: 321 WKVECVGDDIAWMRFDSEGRLRAINPENGFFGVAPGTSATTNPNAMATI 369
>sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 405 bits (1040), Expect = e-112
Identities = 193/289 (66%), Positives = 231/289 (79%)
Frame = +3
Query: 6 MKSLTKYENCWLVRTDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDME 185
++ L KY+NCWL RTDP DVARVESKT I T +R T+P + +G+LGNWMS + +
Sbjct: 83 IRKLPKYKNCWLARTDPKDVARVESKTVIVTPSQRDTVPLLAGGA-RGQLGNWMSPDEFQ 141
Query: 186 AALNDRFPGCMKGRTMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLES 365
A+++RFPGCM+GR MYV+PFSMGP+G PLS+IG++LTDS YVV SM+IMTR+G VL++
Sbjct: 142 RAVDERFPGCMQGRIMYVLPFSMGPVGSPLSRIGVQLTDSAYVVASMRIMTRLGTPVLQA 201
Query: 366 MTDSTPFVKALHSVGVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLG 545
+ D F+K LHSVG PL + WPCNPEKTLI H+P + EI SFGSGYGGNSLLG
Sbjct: 202 LGDGD-FIKCLHSVGQPLTGHGDPVGQWPCNPEKTLIGHVPDQREIVSFGSGYGGNSLLG 260
Query: 546 KKCFALRLGSILARDEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPG 725
KKCFALR+ S LARDE W AEHMLILG+T P G+K Y+ AAFPSACGKTNLAM+ P +PG
Sbjct: 261 KKCFALRIASRLARDEGWLAEHMLILGITNPAGKKRYVAAAFPSACGKTNLAMMRPALPG 320
Query: 726 YKVECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTSHSTNPNAMKCI 872
+KVECVGDDIAWM+FDS+G LRAINPE GFFGVAPGTS +TNPNAM I
Sbjct: 321 WKVECVGDDIAWMRFDSEGQLRAINPENGFFGVAPGTSAATNPNAMATI 369
>sp|P21642|PPCKM_CHICK Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 377 bits (969), Expect = e-104
Identities = 178/286 (62%), Positives = 220/286 (76%)
Frame = +3
Query: 15 LTKYENCWLVRTDPADVARVESKTFISTKLKRTTIPETSDPKIQGKLGNWMSESDMEAAL 194
L KY+NCWL RTDP DVARVESKT + T + +P P +LGNWMS + +AA+
Sbjct: 87 LPKYDNCWLARTDPRDVARVESKTVLVTPEQSDAVPPPP-PSGSPQLGNWMSPNAFQAAV 145
Query: 195 NDRFPGCMKGRTMYVIPFSMGPIGGPLSKIGIELTDSPYVVCSMKIMTRMGHKVLESMTD 374
+RFPGCM GR +YVIPFSMGP PL+K+G+++TDSPYVV SM+IMTR+G VL+ + D
Sbjct: 146 QERFPGCMAGRPLYVIPFSMGPPTSPLAKLGVQVTDSPYVVLSMRIMTRVGPAVLQRLDD 205
Query: 375 STPFVKALHSVGVPLPTERHIINGWPCNPEKTLIAHIPAKNEICSFGSGYGGNSLLGKKC 554
FV+ LHSVG PLP +++ WPC+ + L+AHIP++ I SFGSGYGGNSLLGKKC
Sbjct: 206 D--FVRCLHSVGRPLPLTEPLVSSWPCDRSRVLVAHIPSERRIVSFGSGYGGNSLLGKKC 263
Query: 555 FALRLGSILARDEKWFAEHMLILGLTPPNGEKIYITAAFPSACGKTNLAMIEPTIPGYKV 734
FAL + S +A+ + W AEHMLILG+T P+GEK Y+ AAFPSACGKTNLAM+ P++PG+++
Sbjct: 264 FALAIASRMAQQQGWLAEHMLILGVTSPSGEKRYMAAAFPSACGKTNLAMMTPSLPGWRI 323
Query: 735 ECVGDDIAWMKFDSKGSLRAINPEAGFFGVAPGTSHSTNPNAMKCI 872
CVGDDIAWMKFD +G LRAINPE GFFGVAPGTS TNPNAM I
Sbjct: 324 HCVGDDIAWMKFDDRGRLRAINPERGFFGVAPGTSSRTNPNAMATI 369
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,572,778
Number of Sequences: 369166
Number of extensions: 2500365
Number of successful extensions: 6479
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6353
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8646143400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)