Planarian EST Database


Dr_sW_023_C07

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_023_C07
         (819 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q964E0|ACTC_BIOTE  Actin, cytoplasmic                          525   e-149
sp|Q964E1|ACTC_BIOOB  Actin, cytoplasmic                          525   e-149
sp|Q964D9|ACTC_HELTI  Actin, cytoplasmic                          524   e-148
sp|Q964E2|ACTC_BIOPF  Actin, cytoplasmic                          524   e-148
sp|Q964E3|ACTC_BIOAL  Actin, cytoplasmic                          524   e-148
sp|P92176|ACT2_LUMTE  Actin-2                                     523   e-148
sp|P12716|ACTC_PISOC  Actin, cytoplasmic                          523   e-148
sp|P92179|ACTC_BIOGL  Actin, cytoplasmic                          523   e-148
sp|P53486|ACT3_FUGRU  Actin, cytoplasmic 3 (Beta-actin-3)         523   e-148
sp|P30163|ACT2_ONCVO  Actin-2                                     523   e-148
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
          Length = 376

 Score =  525 bits (1351), Expect = e-149
 Identities = 258/273 (94%), Positives = 268/273 (98%)
 Frame = +1

Query: 1   YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTG 180
           YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTG
Sbjct: 92  YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 151

Query: 181 IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 360
           IVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 152 IVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211

Query: 361 DIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLE 540
           DIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLG+E
Sbjct: 212 DIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGME 271

Query: 541 SVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIV 720
           + GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+
Sbjct: 272 AAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKII 331

Query: 721 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 819
           APPERKYSVWIGGSILASLSTFQQMWISKQEYD
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 364
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
          Length = 376

 Score =  525 bits (1351), Expect = e-149
 Identities = 258/273 (94%), Positives = 269/273 (98%)
 Frame = +1

Query: 1   YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTG 180
           YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTG
Sbjct: 92  YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 151

Query: 181 IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 360
           IVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 152 IVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211

Query: 361 DIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLE 540
           DIKEKLCY+ALDF+ EM+TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG+E
Sbjct: 212 DIKEKLCYVALDFEQEMQTATSSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 271

Query: 541 SVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIV 720
           + GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+
Sbjct: 272 AAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKII 331

Query: 721 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 819
           APPERKYSVWIGGSILASLSTFQQMWISKQEYD
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 364
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
          Length = 376

 Score =  524 bits (1349), Expect = e-148
 Identities = 257/273 (94%), Positives = 268/273 (98%)
 Frame = +1

Query: 1   YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTG 180
           YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTG
Sbjct: 92  YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 151

Query: 181 IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 360
           IV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 152 IVIDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211

Query: 361 DIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLE 540
           DIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERFRCPEA++QPSFLG+E
Sbjct: 212 DIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMYQPSFLGME 271

Query: 541 SVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIV 720
           S GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+
Sbjct: 272 SAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKII 331

Query: 721 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 819
           APPERKYSVWIGGSILASLSTFQQMWISKQEYD
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 364
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
          Length = 376

 Score =  524 bits (1349), Expect = e-148
 Identities = 258/273 (94%), Positives = 267/273 (97%)
 Frame = +1

Query: 1   YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTG 180
           YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTG
Sbjct: 92  YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 151

Query: 181 IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 360
           IVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 152 IVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211

Query: 361 DIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLE 540
           DIKEKLCY+ALDF+ EM TA+ SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLG+E
Sbjct: 212 DIKEKLCYVALDFEQEMHTAATSSSLEKSYELPDGQVITIGNERFRCPEAVFQPSFLGME 271

Query: 541 SVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIV 720
           S GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+
Sbjct: 272 SAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKII 331

Query: 721 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 819
           APPERKYSVWIGGSILASLSTFQQMWISKQEYD
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 364
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
          Length = 376

 Score =  524 bits (1349), Expect = e-148
 Identities = 257/273 (94%), Positives = 268/273 (98%)
 Frame = +1

Query: 1   YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTG 180
           YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTG
Sbjct: 92  YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 151

Query: 181 IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 360
           IV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 152 IVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211

Query: 361 DIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLE 540
           DIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSFLG+E
Sbjct: 212 DIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGME 271

Query: 541 SVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIV 720
           + GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+
Sbjct: 272 AAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKII 331

Query: 721 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 819
           APPERKYSVWIGGSILASLSTFQQMWISKQEYD
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 364
>sp|P92176|ACT2_LUMTE Actin-2
          Length = 376

 Score =  523 bits (1348), Expect = e-148
 Identities = 259/273 (94%), Positives = 268/273 (98%)
 Frame = +1

Query: 1   YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTG 180
           YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTG
Sbjct: 92  YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTG 151

Query: 181 IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 360
           IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 152 IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211

Query: 361 DIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLE 540
           DIKEKLCY+ALDF+ EM TASASSSLEKSYELPDGQVITIGNERFRCPEA+F  SFLG+E
Sbjct: 212 DIKEKLCYVALDFEQEMNTASASSSLEKSYELPDGQVITIGNERFRCPEAMFHASFLGME 271

Query: 541 SVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIV 720
           SVGIHETTYNSIMKCDVDIRKDLYAN VLSGG+TM+PGIADRMQKEI+ALAPPTMKIKI+
Sbjct: 272 SVGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEITALAPPTMKIKII 331

Query: 721 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 819
           APPERKYSVWIGGSILASLSTFQQMWISKQEYD
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 364
>sp|P12716|ACTC_PISOC Actin, cytoplasmic
          Length = 376

 Score =  523 bits (1347), Expect = e-148
 Identities = 257/273 (94%), Positives = 268/273 (98%)
 Frame = +1

Query: 1   YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTG 180
           YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTG
Sbjct: 92  YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 151

Query: 181 IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 360
           IV DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 152 IVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211

Query: 361 DIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLE 540
           DIKEKLCY+ALDF+ EM+TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG+E
Sbjct: 212 DIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 271

Query: 541 SVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIV 720
           S GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKE++ALAPPTMKIKI+
Sbjct: 272 SAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEVTALAPPTMKIKII 331

Query: 721 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 819
           APPERKYSVWIGGSILASLSTFQQMWISKQEYD
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 364
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
          Length = 376

 Score =  523 bits (1346), Expect = e-148
 Identities = 257/273 (94%), Positives = 267/273 (97%)
 Frame = +1

Query: 1   YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTG 180
           YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTG
Sbjct: 92  YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 151

Query: 181 IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 360
           IV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 152 IVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211

Query: 361 DIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLE 540
           DIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERFRCPEA FQPSFLG+E
Sbjct: 212 DIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEATFQPSFLGME 271

Query: 541 SVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIV 720
           + GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+
Sbjct: 272 AAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMKIKII 331

Query: 721 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 819
           APPERKYSVWIGGSILASLSTFQQMWISKQEYD
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 364
>sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3)
          Length = 375

 Score =  523 bits (1346), Expect = e-148
 Identities = 259/273 (94%), Positives = 267/273 (97%)
 Frame = +1

Query: 1   YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTG 180
           YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTG
Sbjct: 91  YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 150

Query: 181 IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 360
           IV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 151 IVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 210

Query: 361 DIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLE 540
           DIKEKLCY+ALDF+ EM TAS+SSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLG+E
Sbjct: 211 DIKEKLCYVALDFEQEMATASSSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGME 270

Query: 541 SVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIV 720
           S GIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMYPGIADRMQKEI+ALAP TMKIKI+
Sbjct: 271 SSGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKII 330

Query: 721 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 819
           APPERKYSVWIGGSILASLSTFQQMWISKQEYD
Sbjct: 331 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 363
>sp|P30163|ACT2_ONCVO Actin-2
          Length = 376

 Score =  523 bits (1346), Expect = e-148
 Identities = 258/273 (94%), Positives = 267/273 (97%)
 Frame = +1

Query: 1   YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTG 180
           YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTG
Sbjct: 92  YNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTG 151

Query: 181 IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 360
           IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR
Sbjct: 152 IVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 211

Query: 361 DIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGLE 540
           DIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVIT+GNERFRCPEALFQPSFLG+E
Sbjct: 212 DIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSFLGME 271

Query: 541 SVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMKIKIV 720
           S GIHETTYNSIMKCD+DIRKDLYAN VLSGGSTMYPGIADRMQKEI+ALAP TMKIKI+
Sbjct: 272 SAGIHETTYNSIMKCDIDIRKDLYANNVLSGGSTMYPGIADRMQKEITALAPSTMKIKII 331

Query: 721 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 819
           APPERKYSVWIGGSILASLSTFQQMWISKQEYD
Sbjct: 332 APPERKYSVWIGGSILASLSTFQQMWISKQEYD 364
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,560,488
Number of Sequences: 369166
Number of extensions: 1926291
Number of successful extensions: 5990
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5830
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7859674995
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)