Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_023_A11
(791 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 475 e-134
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 475 e-134
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 475 e-134
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 473 e-133
sp|Q9W6Y1|HSP7C_ORYLA Heat shock cognate 71 kDa protein (Hs... 468 e-132
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 468 e-131
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 466 e-131
sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (... 462 e-130
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 460 e-129
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 457 e-128
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 475 bits (1222), Expect = e-134
Identities = 233/258 (90%), Positives = 248/258 (96%)
Frame = +2
Query: 17 GNAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 196
G A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 63
Query: 197 NNTVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMV 376
NTVFDAKRLIGR+FD++ VQSDMKHWPF VVN+ GRPK++VE+KGETK+F+PEE+SSMV
Sbjct: 64 TNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMV 123
Query: 377 LIKMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAY 556
L KMKEIAEAYLGK V +AVVTVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAY
Sbjct: 124 LTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAY 183
Query: 557 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQ 736
GLDKKVG+ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI
Sbjct: 184 GLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 737 EFKRKHKKDISDNKRAVR 790
EFKRKHKKDIS+NKRAVR
Sbjct: 244 EFKRKHKKDISENKRAVR 261
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 475 bits (1222), Expect = e-134
Identities = 233/258 (90%), Positives = 248/258 (96%)
Frame = +2
Query: 17 GNAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 196
G A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 63
Query: 197 NNTVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMV 376
NTVFDAKRLIGR+FD++ VQSDMKHWPF VVN+ GRPK++VE+KGETK+F+PEE+SSMV
Sbjct: 64 TNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMV 123
Query: 377 LIKMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAY 556
L KMKEIAEAYLGK V +AVVTVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAY
Sbjct: 124 LTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAY 183
Query: 557 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQ 736
GLDKKVG+ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI
Sbjct: 184 GLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 737 EFKRKHKKDISDNKRAVR 790
EFKRKHKKDIS+NKRAVR
Sbjct: 244 EFKRKHKKDISENKRAVR 261
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 475 bits (1222), Expect = e-134
Identities = 233/258 (90%), Positives = 248/258 (96%)
Frame = +2
Query: 17 GNAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 196
G A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 63
Query: 197 NNTVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMV 376
NTVFDAKRLIGR+FD++ VQSDMKHWPF VVN+ GRPK++VE+KGETK+F+PEE+SSMV
Sbjct: 64 TNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMV 123
Query: 377 LIKMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAY 556
L KMKEIAEAYLGK V +AVVTVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAY
Sbjct: 124 LTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAY 183
Query: 557 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQ 736
GLDKKVG+ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI
Sbjct: 184 GLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 737 EFKRKHKKDISDNKRAVR 790
EFKRKHKKDIS+NKRAVR
Sbjct: 244 EFKRKHKKDISENKRAVR 261
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 473 bits (1217), Expect = e-133
Identities = 232/258 (89%), Positives = 249/258 (96%)
Frame = +2
Query: 17 GNAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 196
G A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP
Sbjct: 4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNP 63
Query: 197 NNTVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMV 376
NTVFDAKRLIGR+FD+ VQSDMKHWPF+V+N++ RPK++VE+KGETK+F+PEEISSMV
Sbjct: 64 CNTVFDAKRLIGRRFDDGVVQSDMKHWPFEVINDSTRPKLQVEYKGETKSFYPEEISSMV 123
Query: 377 LIKMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAY 556
L+KMKEIAEAYLGK V +AVVTVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAY
Sbjct: 124 LVKMKEIAEAYLGKTVNNAVVTVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAY 183
Query: 557 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQ 736
GLDKKVG+ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI
Sbjct: 184 GLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 737 EFKRKHKKDISDNKRAVR 790
EFKRK+KKDISDNKRAVR
Sbjct: 244 EFKRKYKKDISDNKRAVR 261
>sp|Q9W6Y1|HSP7C_ORYLA Heat shock cognate 71 kDa protein (Hsc70.1)
Length = 686
Score = 468 bits (1205), Expect = e-132
Identities = 230/258 (89%), Positives = 245/258 (94%)
Frame = +2
Query: 17 GNAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 196
G A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 63
Query: 197 NNTVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMV 376
NTVFDAKRLIGR+FD+ VQSDM WPF+V+N+ RPK++VE+KGETK+F+PEE+SSMV
Sbjct: 64 TNTVFDAKRLIGRRFDDHVVQSDMNDWPFNVINDNTRPKVQVEYKGETKSFYPEEVSSMV 123
Query: 377 LIKMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAY 556
L KMKEIAEAYLGK V +AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAY
Sbjct: 124 LTKMKEIAEAYLGKTVNNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAY 183
Query: 557 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQ 736
GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI
Sbjct: 184 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 737 EFKRKHKKDISDNKRAVR 790
EFKRK+KKDISDNKRAVR
Sbjct: 244 EFKRKYKKDISDNKRAVR 261
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 468 bits (1203), Expect = e-131
Identities = 230/258 (89%), Positives = 245/258 (94%)
Frame = +2
Query: 17 GNAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 196
G A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 63
Query: 197 NNTVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMV 376
NTVFDAKRLIGR+FD++ VQSDMKHWPF VVN+ GRPK++VE+KGE K+F+PEE+SSMV
Sbjct: 64 TNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGEAKSFYPEEVSSMV 123
Query: 377 LIKMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAY 556
L KMKEIAEAYLGK V +AVVTVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAY
Sbjct: 124 LTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAY 183
Query: 557 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQ 736
GLDKKVG+ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI
Sbjct: 184 GLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 737 EFKRKHKKDISDNKRAVR 790
EFKR KKDIS+NKRAVR
Sbjct: 244 EFKRNDKKDISENKRAVR 261
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 466 bits (1198), Expect = e-131
Identities = 225/258 (87%), Positives = 246/258 (95%)
Frame = +2
Query: 17 GNAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 196
G A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD+ERLIGDAAKNQVAMNP
Sbjct: 4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNP 63
Query: 197 NNTVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMV 376
NT+FDAKRLIGR+F++S VQ+DMKHWPF V+++ GRP+++VE+KGE K F+PEEISSMV
Sbjct: 64 TNTIFDAKRLIGRRFEDSVVQADMKHWPFKVISDGGRPRLEVEYKGEAKNFYPEEISSMV 123
Query: 377 LIKMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAY 556
L+KMKEIAEAYLGK + +AV+TVPAYFNDSQRQ TKDAG ISGLNVLRIINEPTAAAIAY
Sbjct: 124 LVKMKEIAEAYLGKSINNAVITVPAYFNDSQRQRTKDAGTISGLNVLRIINEPTAAAIAY 183
Query: 557 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQ 736
GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIF++KSTAGDTHLGGEDFDNRMVNHFI
Sbjct: 184 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFDLKSTAGDTHLGGEDFDNRMVNHFIA 243
Query: 737 EFKRKHKKDISDNKRAVR 790
EFKRKHKKDISDNKRAVR
Sbjct: 244 EFKRKHKKDISDNKRAVR 261
>sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (Hsc 70-4)
Length = 652
Score = 462 bits (1189), Expect = e-130
Identities = 224/256 (87%), Positives = 245/256 (95%)
Frame = +2
Query: 23 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPNN 202
A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT+RLIGDAAKNQVAMNPNN
Sbjct: 6 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTDRLIGDAAKNQVAMNPNN 65
Query: 203 TVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMVLI 382
T+FDAKRLIGRKF+++TVQ+DMKHWPF+VV++ G+PKIKV +KGE KTFFPEE+SSMVL
Sbjct: 66 TIFDAKRLIGRKFEDATVQADMKHWPFEVVSDGGKPKIKVAYKGEDKTFFPEEVSSMVLT 125
Query: 383 KMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAYGL 562
KMKE AEAYLGK V++AV+TVPAYFNDSQRQATKDAG ISGLNVLRIINEPTAAAIAYGL
Sbjct: 126 KMKETAEAYLGKTVQNAVITVPAYFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGL 185
Query: 563 DKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEF 742
DKK ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF+QEF
Sbjct: 186 DKKGSGERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEF 245
Query: 743 KRKHKKDISDNKRAVR 790
KRK+KKD++ NKRA+R
Sbjct: 246 KRKYKKDLTTNKRALR 261
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 460 bits (1183), Expect = e-129
Identities = 226/258 (87%), Positives = 242/258 (93%)
Frame = +2
Query: 17 GNAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 196
G A+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 4 GPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 63
Query: 197 NNTVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMV 376
NTV DA RL GR+FD+ VQSDMKHWPF+V+N+ RPK++VE+KGE+K+F+PEEISSMV
Sbjct: 64 TNTVLDANRLNGRQFDDGVVQSDMKHWPFNVINDNSRPKVQVEYKGESKSFYPEEISSMV 123
Query: 377 LIKMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAY 556
L KMKEIAEAYLGK V +AV+TVPAY NDSQRQATKDAG ISGLNVL IINEPTAAAIAY
Sbjct: 124 LTKMKEIAEAYLGKTVSNAVITVPAYSNDSQRQATKDAGTISGLNVLVIINEPTAAAIAY 183
Query: 557 GLDKKVGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQ 736
GLDKKVG+ERNVLIFDLGGG+FDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI
Sbjct: 184 GLDKKVGAERNVLIFDLGGGSFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIT 243
Query: 737 EFKRKHKKDISDNKRAVR 790
EFKRKHKKDISDNKRAVR
Sbjct: 244 EFKRKHKKDISDNKRAVR 261
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 457 bits (1176), Expect = e-128
Identities = 228/260 (87%), Positives = 242/260 (93%), Gaps = 2/260 (0%)
Frame = +2
Query: 17 GNAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 196
G AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP
Sbjct: 5 GPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNP 64
Query: 197 NNTVFDAKRLIGRKFDESTVQSDMKHWPFDVVNETGRPKIKVEFKGETKTFFPEEISSMV 376
NT+FDAKRLIGRKF+++TVQSDMKHWPF VV+E G+PK++VE+KGETKTFFPEEISSMV
Sbjct: 65 TNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMV 124
Query: 377 LIKMKEIAEAYLGKVVKDAVVTVPAYFNDSQRQATKDAGAISGLNVLRIINEPTAAAIAY 556
L KMKEIAEAYLG V AV+TVPAYFNDSQRQATKDAG I+GLNVLRIINEPTAAAIAY
Sbjct: 125 LTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAY 184
Query: 557 GLDKK--VGSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF 730
GLDKK G E+NVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMV+H
Sbjct: 185 GLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHL 244
Query: 731 IQEFKRKHKKDISDNKRAVR 790
+EFKRKHKKDI NKRAVR
Sbjct: 245 AEEFKRKHKKDIGPNKRAVR 264
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,143,973
Number of Sequences: 369166
Number of extensions: 1702622
Number of successful extensions: 6479
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5541
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7425705210
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)