Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_022_P06
(250 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9GP32|ALF_ECHMU Fructose-bisphosphate aldolase 63 2e-10
sp|P53442|ALF_SCHMA Fructose-bisphosphate aldolase 59 3e-09
sp|P53449|ALDOC_CHICK Fructose-bisphosphate aldolase C (Bra... 45 7e-05
sp|P05063|ALDOC_MOUSE Fructose-bisphosphate aldolase C (Bra... 44 9e-05
sp|P53445|ALF1_LAMJA Fructose-bisphosphate aldolase, muscle... 44 2e-04
sp|P09117|ALDOC_RAT Fructose-bisphosphate aldolase C (Brain... 44 2e-04
sp|P46563|ALF2_CAEEL Fructose-bisphosphate aldolase 2 (Aldo... 43 3e-04
sp|P53448|ALDOC_CARAU Fructose-bisphosphate aldolase C (Bra... 41 7e-04
sp|P54216|ALF1_CAEEL Fructose-bisphosphate aldolase 1 (Aldo... 41 7e-04
sp|Q9GKW3|ALDOC_MACFA Fructose-bisphosphate aldolase C (Bra... 40 0.001
>sp|Q9GP32|ALF_ECHMU Fructose-bisphosphate aldolase
Length = 363
Score = 63.2 bits (152), Expect = 2e-10
Identities = 30/39 (76%), Positives = 36/39 (92%)
Frame = +2
Query: 14 QMELLKLAQANGAASLGRFEGQLETAAGGQSLFVANHAY 130
Q E L+LA+ANGAASLG+FEG+L+TAAG +SLFVANHAY
Sbjct: 325 QAEFLQLAKANGAASLGKFEGELKTAAGQKSLFVANHAY 363
>sp|P53442|ALF_SCHMA Fructose-bisphosphate aldolase
Length = 363
Score = 59.3 bits (142), Expect = 3e-09
Identities = 28/40 (70%), Positives = 34/40 (85%)
Frame = +2
Query: 11 AQMELLKLAQANGAASLGRFEGQLETAAGGQSLFVANHAY 130
AQ ELLKLA+ANGAA++G+FEG + T G +SLFVANHAY
Sbjct: 324 AQEELLKLAKANGAAAVGKFEGNMGTTLGDKSLFVANHAY 363
>sp|P53449|ALDOC_CHICK Fructose-bisphosphate aldolase C (Brain-type aldolase)
Length = 137
Score = 44.7 bits (104), Expect = 7e-05
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
Frame = +2
Query: 11 AQMELLKLAQANGAASLGRFEGQLE-TAAGGQSLFVANHAY 130
A E +K A+ NG A+LG++EG + + A GQSL+VANHAY
Sbjct: 97 ATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137
>sp|P05063|ALDOC_MOUSE Fructose-bisphosphate aldolase C (Brain-type aldolase) (Aldolase 3)
(Zebrin II) (Scrapie-responsive protein 2)
Length = 363
Score = 44.3 bits (103), Expect = 9e-05
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +2
Query: 11 AQMELLKLAQANGAASLGRFEGQLETAAGGQSLFVANHAY 130
A E +K A+ NG A+ GR+EG + A QSL++ANHAY
Sbjct: 324 ATEEFIKRAEMNGLAAQGRYEGSGDGGAAAQSLYIANHAY 363
>sp|P53445|ALF1_LAMJA Fructose-bisphosphate aldolase, muscle type
Length = 363
Score = 43.5 bits (101), Expect = 2e-04
Identities = 22/40 (55%), Positives = 28/40 (70%)
Frame = +2
Query: 11 AQMELLKLAQANGAASLGRFEGQLETAAGGQSLFVANHAY 130
AQ EL++ A+ NG AS G ++ AA G+SLFVANHAY
Sbjct: 324 AQDELMRRAKINGQASKGEYKPTGTGAAAGESLFVANHAY 363
>sp|P09117|ALDOC_RAT Fructose-bisphosphate aldolase C (Brain-type aldolase)
Length = 363
Score = 43.5 bits (101), Expect = 2e-04
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +2
Query: 11 AQMELLKLAQANGAASLGRFEGQLETAAGGQSLFVANHAY 130
A E +K A+ NG A+ G++EG + A QSL+VANHAY
Sbjct: 324 ATEEFIKRAEMNGLAAQGKYEGSGDGGAAAQSLYVANHAY 363
>sp|P46563|ALF2_CAEEL Fructose-bisphosphate aldolase 2 (Aldolase CE-2) (CE2)
Length = 366
Score = 42.7 bits (99), Expect = 3e-04
Identities = 21/43 (48%), Positives = 28/43 (65%)
Frame = +2
Query: 2 IIPAQMELLKLAQANGAASLGRFEGQLETAAGGQSLFVANHAY 130
I AQ LL ++ANG ASLG++ G+ A +SLFVA H+Y
Sbjct: 324 IAAAQKTLLHRSKANGDASLGKYAGEDAAGAAAESLFVAKHSY 366
>sp|P53448|ALDOC_CARAU Fructose-bisphosphate aldolase C (Brain-type aldolase)
Length = 363
Score = 41.2 bits (95), Expect = 7e-04
Identities = 20/40 (50%), Positives = 26/40 (65%)
Frame = +2
Query: 11 AQMELLKLAQANGAASLGRFEGQLETAAGGQSLFVANHAY 130
A E LK A+ANG A+ G++ + GQSL+VANHAY
Sbjct: 324 ATEEFLKRAEANGLAAQGKYVSSGMDGSAGQSLYVANHAY 363
>sp|P54216|ALF1_CAEEL Fructose-bisphosphate aldolase 1 (Aldolase CE-1) (CE1)
Length = 366
Score = 41.2 bits (95), Expect = 7e-04
Identities = 23/44 (52%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +2
Query: 2 IIPAQMELLKLAQANGAASLGRFEGQLET-AAGGQSLFVANHAY 130
I AQ LL AQ N AS+G++ G AA QSLFVANH+Y
Sbjct: 323 IAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366
>sp|Q9GKW3|ALDOC_MACFA Fructose-bisphosphate aldolase C (Brain-type aldolase)
Length = 364
Score = 40.4 bits (93), Expect = 0.001
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Frame = +2
Query: 11 AQMELLKLAQANGAASLGRFEGQLET-AAGGQSLFVANHAY 130
A E +K A+ NG A+ G++EG E A QSL++ANHAY
Sbjct: 324 ATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,542,863
Number of Sequences: 369166
Number of extensions: 393776
Number of successful extensions: 819
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 68,354,980
effective HSP length: 53
effective length of database: 58,564,025
effective search space used: 1698356725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)