Planarian EST Database


Dr_sW_022_P06

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_022_P06
         (250 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9GP32|ALF_ECHMU  Fructose-bisphosphate aldolase                63   2e-10
sp|P53442|ALF_SCHMA  Fructose-bisphosphate aldolase                59   3e-09
sp|P53449|ALDOC_CHICK  Fructose-bisphosphate aldolase C (Bra...    45   7e-05
sp|P05063|ALDOC_MOUSE  Fructose-bisphosphate aldolase C (Bra...    44   9e-05
sp|P53445|ALF1_LAMJA  Fructose-bisphosphate aldolase, muscle...    44   2e-04
sp|P09117|ALDOC_RAT  Fructose-bisphosphate aldolase C (Brain...    44   2e-04
sp|P46563|ALF2_CAEEL  Fructose-bisphosphate aldolase 2 (Aldo...    43   3e-04
sp|P53448|ALDOC_CARAU  Fructose-bisphosphate aldolase C (Bra...    41   7e-04
sp|P54216|ALF1_CAEEL  Fructose-bisphosphate aldolase 1 (Aldo...    41   7e-04
sp|Q9GKW3|ALDOC_MACFA  Fructose-bisphosphate aldolase C (Bra...    40   0.001
>sp|Q9GP32|ALF_ECHMU Fructose-bisphosphate aldolase
          Length = 363

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 30/39 (76%), Positives = 36/39 (92%)
 Frame = +2

Query: 14  QMELLKLAQANGAASLGRFEGQLETAAGGQSLFVANHAY 130
           Q E L+LA+ANGAASLG+FEG+L+TAAG +SLFVANHAY
Sbjct: 325 QAEFLQLAKANGAASLGKFEGELKTAAGQKSLFVANHAY 363
>sp|P53442|ALF_SCHMA Fructose-bisphosphate aldolase
          Length = 363

 Score = 59.3 bits (142), Expect = 3e-09
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = +2

Query: 11  AQMELLKLAQANGAASLGRFEGQLETAAGGQSLFVANHAY 130
           AQ ELLKLA+ANGAA++G+FEG + T  G +SLFVANHAY
Sbjct: 324 AQEELLKLAKANGAAAVGKFEGNMGTTLGDKSLFVANHAY 363
>sp|P53449|ALDOC_CHICK Fructose-bisphosphate aldolase C (Brain-type aldolase)
          Length = 137

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
 Frame = +2

Query: 11  AQMELLKLAQANGAASLGRFEGQLE-TAAGGQSLFVANHAY 130
           A  E +K A+ NG A+LG++EG  + + A GQSL+VANHAY
Sbjct: 97  ATEEFVKRAEVNGLAALGKYEGSGDDSGAAGQSLYVANHAY 137
>sp|P05063|ALDOC_MOUSE Fructose-bisphosphate aldolase C (Brain-type aldolase) (Aldolase 3)
           (Zebrin II) (Scrapie-responsive protein 2)
          Length = 363

 Score = 44.3 bits (103), Expect = 9e-05
 Identities = 20/40 (50%), Positives = 27/40 (67%)
 Frame = +2

Query: 11  AQMELLKLAQANGAASLGRFEGQLETAAGGQSLFVANHAY 130
           A  E +K A+ NG A+ GR+EG  +  A  QSL++ANHAY
Sbjct: 324 ATEEFIKRAEMNGLAAQGRYEGSGDGGAAAQSLYIANHAY 363
>sp|P53445|ALF1_LAMJA Fructose-bisphosphate aldolase, muscle type
          Length = 363

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 22/40 (55%), Positives = 28/40 (70%)
 Frame = +2

Query: 11  AQMELLKLAQANGAASLGRFEGQLETAAGGQSLFVANHAY 130
           AQ EL++ A+ NG AS G ++     AA G+SLFVANHAY
Sbjct: 324 AQDELMRRAKINGQASKGEYKPTGTGAAAGESLFVANHAY 363
>sp|P09117|ALDOC_RAT Fructose-bisphosphate aldolase C (Brain-type aldolase)
          Length = 363

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 20/40 (50%), Positives = 27/40 (67%)
 Frame = +2

Query: 11  AQMELLKLAQANGAASLGRFEGQLETAAGGQSLFVANHAY 130
           A  E +K A+ NG A+ G++EG  +  A  QSL+VANHAY
Sbjct: 324 ATEEFIKRAEMNGLAAQGKYEGSGDGGAAAQSLYVANHAY 363
>sp|P46563|ALF2_CAEEL Fructose-bisphosphate aldolase 2 (Aldolase CE-2) (CE2)
          Length = 366

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 21/43 (48%), Positives = 28/43 (65%)
 Frame = +2

Query: 2   IIPAQMELLKLAQANGAASLGRFEGQLETAAGGQSLFVANHAY 130
           I  AQ  LL  ++ANG ASLG++ G+    A  +SLFVA H+Y
Sbjct: 324 IAAAQKTLLHRSKANGDASLGKYAGEDAAGAAAESLFVAKHSY 366
>sp|P53448|ALDOC_CARAU Fructose-bisphosphate aldolase C (Brain-type aldolase)
          Length = 363

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 20/40 (50%), Positives = 26/40 (65%)
 Frame = +2

Query: 11  AQMELLKLAQANGAASLGRFEGQLETAAGGQSLFVANHAY 130
           A  E LK A+ANG A+ G++       + GQSL+VANHAY
Sbjct: 324 ATEEFLKRAEANGLAAQGKYVSSGMDGSAGQSLYVANHAY 363
>sp|P54216|ALF1_CAEEL Fructose-bisphosphate aldolase 1 (Aldolase CE-1) (CE1)
          Length = 366

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 23/44 (52%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = +2

Query: 2   IIPAQMELLKLAQANGAASLGRFEGQLET-AAGGQSLFVANHAY 130
           I  AQ  LL  AQ N  AS+G++ G     AA  QSLFVANH+Y
Sbjct: 323 IAAAQEVLLHRAQVNSLASVGKYTGDASADAAASQSLFVANHSY 366
>sp|Q9GKW3|ALDOC_MACFA Fructose-bisphosphate aldolase C (Brain-type aldolase)
          Length = 364

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +2

Query: 11  AQMELLKLAQANGAASLGRFEGQLET-AAGGQSLFVANHAY 130
           A  E +K A+ NG A+ G++EG  E   A  QSL++ANHAY
Sbjct: 324 ATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,542,863
Number of Sequences: 369166
Number of extensions: 393776
Number of successful extensions: 819
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 68,354,980
effective HSP length: 53
effective length of database: 58,564,025
effective search space used: 1698356725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)