Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_022_O22
(698 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P00504|AATC_CHICK Aspartate aminotransferase, cytoplasmi... 265 1e-70
sp|P13221|AATC_RAT Aspartate aminotransferase, cytoplasmic ... 256 4e-68
sp|P05201|AATC_MOUSE Aspartate aminotransferase, cytoplasmi... 255 7e-68
sp|P08906|AATC_HORSE Aspartate aminotransferase, cytoplasmi... 251 1e-66
sp|P00503|AATC_PIG Aspartate aminotransferase, cytoplasmic ... 249 5e-66
sp|P33097|AATC_BOVIN Aspartate aminotransferase, cytoplasmi... 248 8e-66
sp|P17174|AATC_HUMAN Aspartate aminotransferase, cytoplasmi... 243 3e-64
sp|Q22067|AATC_CAEEL Probable aspartate aminotransferase, c... 236 4e-62
sp|P37833|AATC_ORYSA Aspartate aminotransferase, cytoplasmi... 214 1e-55
sp|P46644|AAT3_ARATH Aspartate aminotransferase, chloroplas... 214 2e-55
>sp|P00504|AATC_CHICK Aspartate aminotransferase, cytoplasmic (Transaminase A) (Glutamate
oxaloacetate transaminase 1)
Length = 412
Score = 265 bits (676), Expect = 1e-70
Identities = 125/197 (63%), Positives = 149/197 (75%)
Frame = +3
Query: 9 RGIFPIFDIAYQGFASGDLDNDAWAVRYYAEQGFELFACQSFSKNFGLYNERVGNLCIVT 188
R +FP FD AYQGFASG LD DAWAVRY+ +GFELF QSFSKNFGLYNERVGNL +V
Sbjct: 215 RCLFPFFDSAYQGFASGSLDKDAWAVRYFVSEGFELFCAQSFSKNFGLYNERVGNLSVVG 274
Query: 189 KDAAITGRVKSQMTVLVRQAWSNPPNHGGRIVATVLSNPALFAEWKGNVKLMADRVILMR 368
KD RV SQM +VR WSNPP+ G RIVAT L++P LFAEWK NVK MADRV+LMR
Sbjct: 275 KDEDNVQRVLSQMEKIVRTTWSNPPSQGARIVATTLTSPQLFAEWKDNVKTMADRVLLMR 334
Query: 369 QMLFEKLQSFGTPGSWEHVIKQIGMFSFTGLNKNQVDHMRNKYHIYMLNDGRINMCGLNN 548
L +L+S GTPG+W H+ QIGMFSFTGLN QV++M + HIY++ GRINMCGL
Sbjct: 335 SELRSRLESLGTPGTWNHITDQIGMFSFTGLNPKQVEYMIKEKHIYLMASGRINMCGLTT 394
Query: 549 SNVEYVAKAIDDAIRNV 599
N++YVAK+I +A+ +
Sbjct: 395 KNLDYVAKSIHEAVTKI 411
>sp|P13221|AATC_RAT Aspartate aminotransferase, cytoplasmic (Transaminase A) (Glutamate
oxaloacetate transaminase 1)
Length = 413
Score = 256 bits (654), Expect = 4e-68
Identities = 120/194 (61%), Positives = 148/194 (76%)
Frame = +3
Query: 9 RGIFPIFDIAYQGFASGDLDNDAWAVRYYAEQGFELFACQSFSKNFGLYNERVGNLCIVT 188
R +FP FD AYQGFASGDL+ DAWA+RY+ +GFELF QSFSKNFGLYNERVGNL +V
Sbjct: 216 RFLFPFFDSAYQGFASGDLEKDAWAIRYFVSEGFELFCPQSFSKNFGLYNERVGNLTVVG 275
Query: 189 KDAAITGRVKSQMTVLVRQAWSNPPNHGGRIVATVLSNPALFAEWKGNVKLMADRVILMR 368
K+ RV SQM +VR WSNPP G RIVAT LSNP LF EWKGNVK MADR++ MR
Sbjct: 276 KEHDSVLRVLSQMEKIVRITWSNPPAQGARIVATTLSNPELFKEWKGNVKTMADRILTMR 335
Query: 369 QMLFEKLQSFGTPGSWEHVIKQIGMFSFTGLNKNQVDHMRNKYHIYMLNDGRINMCGLNN 548
L +L++ TPG+W H+ +QIGMFSFTGLN QV+++ N+ HIY++ GRINMCGL
Sbjct: 336 SELRARLEALKTPGTWSHITEQIGMFSFTGLNPKQVEYLVNEKHIYLMPSGRINMCGLTT 395
Query: 549 SNVEYVAKAIDDAI 590
N++YVA +I++A+
Sbjct: 396 KNLDYVATSINEAV 409
>sp|P05201|AATC_MOUSE Aspartate aminotransferase, cytoplasmic (Transaminase A) (Glutamate
oxaloacetate transaminase 1)
Length = 413
Score = 255 bits (652), Expect = 7e-68
Identities = 119/197 (60%), Positives = 148/197 (75%)
Frame = +3
Query: 9 RGIFPIFDIAYQGFASGDLDNDAWAVRYYAEQGFELFACQSFSKNFGLYNERVGNLCIVT 188
R +FP FD AYQGFASGDL+ DAWA+RY+ +GFELF QSFSKNFGLYNERVGNL +V
Sbjct: 216 RFLFPFFDSAYQGFASGDLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVG 275
Query: 189 KDAAITGRVKSQMTVLVRQAWSNPPNHGGRIVATVLSNPALFAEWKGNVKLMADRVILMR 368
K++ RV SQM +VR WSNPP G RIVA LS+P LF EWKGNVK MADR++ MR
Sbjct: 276 KESDSVLRVLSQMEKIVRITWSNPPAQGARIVAATLSDPELFKEWKGNVKTMADRILTMR 335
Query: 369 QMLFEKLQSFGTPGSWEHVIKQIGMFSFTGLNKNQVDHMRNKYHIYMLNDGRINMCGLNN 548
L +L++ TPG+W H+ +QIGMFSFTGLN QV+++ N+ HIY+L GRINMCGL
Sbjct: 336 SELRARLEALKTPGTWSHITEQIGMFSFTGLNPKQVEYLVNEKHIYLLPSGRINMCGLTT 395
Query: 549 SNVEYVAKAIDDAIRNV 599
N++YVA +I +A+ +
Sbjct: 396 KNLDYVATSIHEAVTKI 412
>sp|P08906|AATC_HORSE Aspartate aminotransferase, cytoplasmic (Transaminase A) (Glutamate
oxaloacetate transaminase 1)
Length = 412
Score = 251 bits (641), Expect = 1e-66
Identities = 119/194 (61%), Positives = 145/194 (74%)
Frame = +3
Query: 9 RGIFPIFDIAYQGFASGDLDNDAWAVRYYAEQGFELFACQSFSKNFGLYNERVGNLCIVT 188
R +FP FD AYQGFASG+LD DAWAVRY+ +GFELF QSFSKNFGLYNERVGNL +V
Sbjct: 215 RFLFPFFDSAYQGFASGNLDRDAWAVRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVA 274
Query: 189 KDAAITGRVKSQMTVLVRQAWSNPPNHGGRIVATVLSNPALFAEWKGNVKLMADRVILMR 368
K+ RV SQM +VR WSNPP G RIVA LS+P LF EW GNVK MADR++ MR
Sbjct: 275 KEPDSILRVLSQMQKIVRITWSNPPAQGARIVAFTLSDPGLFKEWTGNVKTMADRILSMR 334
Query: 369 QMLFEKLQSFGTPGSWEHVIKQIGMFSFTGLNKNQVDHMRNKYHIYMLNDGRINMCGLNN 548
L +L++ TPG+W H+ +QIGMFSFTGLN QV+++ N+ HIY+L GRINMCGL
Sbjct: 335 SELRARLEALKTPGTWNHITEQIGMFSFTGLNPKQVEYLVNQKHIYLLPSGRINMCGLTT 394
Query: 549 SNVEYVAKAIDDAI 590
N++YVA +I +A+
Sbjct: 395 KNLDYVATSIHEAV 408
>sp|P00503|AATC_PIG Aspartate aminotransferase, cytoplasmic (Transaminase A) (Glutamate
oxaloacetate transaminase 1)
Length = 413
Score = 249 bits (636), Expect = 5e-66
Identities = 117/197 (59%), Positives = 145/197 (73%)
Frame = +3
Query: 9 RGIFPIFDIAYQGFASGDLDNDAWAVRYYAEQGFELFACQSFSKNFGLYNERVGNLCIVT 188
R +FP FD AYQGFASG+L+ DAWA+RY+ +GFELF QSFSKNFGLYNERVGNL +V
Sbjct: 216 RFLFPFFDSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVA 275
Query: 189 KDAAITGRVKSQMTVLVRQAWSNPPNHGGRIVATVLSNPALFAEWKGNVKLMADRVILMR 368
K+ RV SQM +VR WSNPP G RIVA LS+P LF EW GNVK MADR++ MR
Sbjct: 276 KEPDSILRVLSQMEKIVRVTWSNPPAQGARIVARTLSDPELFHEWTGNVKTMADRILSMR 335
Query: 369 QMLFEKLQSFGTPGSWEHVIKQIGMFSFTGLNKNQVDHMRNKYHIYMLNDGRINMCGLNN 548
L +L++ TPG+W H+ QIGMFSFTGLN QV+++ N+ HIY+L GRINMCGL
Sbjct: 336 SELRARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLINEKHIYLLPSGRINMCGLTT 395
Query: 549 SNVEYVAKAIDDAIRNV 599
N++YVA +I +A+ +
Sbjct: 396 KNLDYVATSIHEAVTKI 412
>sp|P33097|AATC_BOVIN Aspartate aminotransferase, cytoplasmic (Transaminase A) (Glutamate
oxaloacetate transaminase 1)
Length = 413
Score = 248 bits (634), Expect = 8e-66
Identities = 117/197 (59%), Positives = 144/197 (73%)
Frame = +3
Query: 9 RGIFPIFDIAYQGFASGDLDNDAWAVRYYAEQGFELFACQSFSKNFGLYNERVGNLCIVT 188
R +FP FD AYQ FASG L+ DAWA+RY+ +GFELF QSFSKNFGLYNERVGNL +V
Sbjct: 216 RFLFPFFDSAYQAFASGSLEKDAWAIRYFVSEGFELFCAQSFSKNFGLYNERVGNLTVVA 275
Query: 189 KDAAITGRVKSQMTVLVRQAWSNPPNHGGRIVATVLSNPALFAEWKGNVKLMADRVILMR 368
K+ RV SQM +VR WSNPP G RIVA LS+P LF EW GNVK MADR++ MR
Sbjct: 276 KEPDSILRVLSQMEKIVRITWSNPPAQGARIVARTLSDPELFNEWTGNVKTMADRILTMR 335
Query: 369 QMLFEKLQSFGTPGSWEHVIKQIGMFSFTGLNKNQVDHMRNKYHIYMLNDGRINMCGLNN 548
L +L++ TPG+W H+ +QIGMFSFTGLN QV+++ N+ HIY+L GRINMCGL
Sbjct: 336 SELRARLEALKTPGTWNHITEQIGMFSFTGLNPKQVEYLINEKHIYLLPSGRINMCGLTT 395
Query: 549 SNVEYVAKAIDDAIRNV 599
N+EYVA +I +A+ +
Sbjct: 396 KNLEYVATSIHEAVTKI 412
>sp|P17174|AATC_HUMAN Aspartate aminotransferase, cytoplasmic (Transaminase A) (Glutamate
oxaloacetate transaminase 1)
Length = 413
Score = 243 bits (621), Expect = 3e-64
Identities = 114/197 (57%), Positives = 144/197 (73%)
Frame = +3
Query: 9 RGIFPIFDIAYQGFASGDLDNDAWAVRYYAEQGFELFACQSFSKNFGLYNERVGNLCIVT 188
R +FP FD AYQGFASG+L+ DAWA+RY+ +GFE F QSFSKNFGLYNERVGNL +V
Sbjct: 216 RFLFPFFDSAYQGFASGNLERDAWAIRYFVSEGFEFFCAQSFSKNFGLYNERVGNLTVVG 275
Query: 189 KDAAITGRVKSQMTVLVRQAWSNPPNHGGRIVATVLSNPALFAEWKGNVKLMADRVILMR 368
K+ +V SQM +VR WSNPP G RIVA+ LSNP LF EW GNVK MADR++ MR
Sbjct: 276 KEPESILQVLSQMEKIVRITWSNPPAQGARIVASTLSNPELFEEWTGNVKTMADRILTMR 335
Query: 369 QMLFEKLQSFGTPGSWEHVIKQIGMFSFTGLNKNQVDHMRNKYHIYMLNDGRINMCGLNN 548
L +L++ TPG+W H+ QIGMFSFTGLN QV+++ N+ HIY+L GRIN+ GL
Sbjct: 336 SELRARLEALKTPGTWNHITDQIGMFSFTGLNPKQVEYLVNEKHIYLLPSGRINVSGLTT 395
Query: 549 SNVEYVAKAIDDAIRNV 599
N++YVA +I +A+ +
Sbjct: 396 KNLDYVATSIHEAVTKI 412
>sp|Q22067|AATC_CAEEL Probable aspartate aminotransferase, cytoplasmic (Transaminase A)
(Glutamate oxaloacetate transaminase-1)
Length = 408
Score = 236 bits (602), Expect = 4e-62
Identities = 107/197 (54%), Positives = 142/197 (72%)
Frame = +3
Query: 9 RGIFPIFDIAYQGFASGDLDNDAWAVRYYAEQGFELFACQSFSKNFGLYNERVGNLCIVT 188
+ +F FDIAYQGFASGD DAWA+RY+ +QG E+ QSF+KNFGLYNERVGNL +V
Sbjct: 208 KNLFTFFDIAYQGFASGDPAADAWAIRYFVDQGMEMVVSQSFAKNFGLYNERVGNLTVVV 267
Query: 189 KDAAITGRVKSQMTVLVRQAWSNPPNHGGRIVATVLSNPALFAEWKGNVKLMADRVILMR 368
+ A+ +SQM++++R WSNPP HG RIV VL+ PA +W +++ M+ R+ MR
Sbjct: 268 NNPAVIAGFQSQMSLVIRANWSNPPAHGARIVHKVLTTPARREQWNQSIQAMSSRIKQMR 327
Query: 369 QMLFEKLQSFGTPGSWEHVIKQIGMFSFTGLNKNQVDHMRNKYHIYMLNDGRINMCGLNN 548
L L GTPG+W+H+I+QIGMFS+TGL QVDH+ + +++L DGRIN+CGLN
Sbjct: 328 AALLRHLMDLGTPGTWDHIIQQIGMFSYTGLTSAQVDHLIANHKVFLLRDGRINICGLNT 387
Query: 549 SNVEYVAKAIDDAIRNV 599
NVEYVAKAID+ +R V
Sbjct: 388 KNVEYVAKAIDETVRAV 404
>sp|P37833|AATC_ORYSA Aspartate aminotransferase, cytoplasmic (Transaminase A)
Length = 407
Score = 214 bits (546), Expect = 1e-55
Identities = 104/195 (53%), Positives = 137/195 (70%)
Frame = +3
Query: 6 ARGIFPIFDIAYQGFASGDLDNDAWAVRYYAEQGFELFACQSFSKNFGLYNERVGNLCIV 185
++ + P FD AYQGFASG LD DA +VR + G EL QS++KN GLY ERVG L IV
Sbjct: 209 SKALLPFFDSAYQGFASGSLDQDAQSVRMFVADGGELLMAQSYAKNMGLYGERVGALSIV 268
Query: 186 TKDAAITGRVKSQMTVLVRQAWSNPPNHGGRIVATVLSNPALFAEWKGNVKLMADRVILM 365
A + RV+SQ+ +++R +SNPP HG IVAT+L + A+F EW +K MADR+I M
Sbjct: 269 CGSADVAVRVESQLKLVIRPMYSNPPIHGASIVATILKDSAMFNEWTVELKGMADRIISM 328
Query: 366 RQMLFEKLQSFGTPGSWEHVIKQIGMFSFTGLNKNQVDHMRNKYHIYMLNDGRINMCGLN 545
RQ LF+ L++ TPG W H+IKQIGMF+FTGLN +QV MR +YHIYM +DGRI+M GL+
Sbjct: 329 RQQLFDALKTRETPGDWSHIIKQIGMFTFTGLNSDQVAFMRQEYHIYMTSDGRISMAGLS 388
Query: 546 NSNVEYVAKAIDDAI 590
+ ++A AI A+
Sbjct: 389 GRTIPHLADAIHAAV 403
>sp|P46644|AAT3_ARATH Aspartate aminotransferase, chloroplast precursor (Transaminase A)
Length = 449
Score = 214 bits (545), Expect = 2e-55
Identities = 103/191 (53%), Positives = 134/191 (70%)
Frame = +3
Query: 6 ARGIFPIFDIAYQGFASGDLDNDAWAVRYYAEQGFELFACQSFSKNFGLYNERVGNLCIV 185
++G+ P FD AYQGFASG LD DA +R + G E QS++KN GLY ERVG L IV
Sbjct: 251 SKGLMPFFDSAYQGFASGSLDTDAKPIRMFVADGGECLVAQSYAKNMGLYGERVGALSIV 310
Query: 186 TKDAAITGRVKSQMTVLVRQAWSNPPNHGGRIVATVLSNPALFAEWKGNVKLMADRVILM 365
K A + GRV+SQ+ +++R +S+PP HG IVA +L + LF EW +K MADR+I M
Sbjct: 311 CKSADVAGRVESQLKLVIRPMYSSPPIHGASIVAVILRDKNLFNEWTLELKAMADRIISM 370
Query: 366 RQMLFEKLQSFGTPGSWEHVIKQIGMFSFTGLNKNQVDHMRNKYHIYMLNDGRINMCGLN 545
R+ LFE L++ GTPG W H+IKQIGMF+FTGLN QV M +YHIYM +DGRI+M GL+
Sbjct: 371 RKQLFEALRTRGTPGDWSHIIKQIGMFTFTGLNPAQVSFMTKEYHIYMTSDGRISMAGLS 430
Query: 546 NSNVEYVAKAI 578
+ V ++A AI
Sbjct: 431 SKTVPHLADAI 441
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,072,305
Number of Sequences: 369166
Number of extensions: 1588933
Number of successful extensions: 3886
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3868
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6073541875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)