Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_022_M21
(532 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 247 1e-65
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 246 2e-65
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 245 6e-65
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 245 6e-65
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 245 6e-65
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 244 7e-65
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 243 2e-64
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 243 2e-64
sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A 242 4e-64
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 240 2e-63
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 247 bits (630), Expect = 1e-65
Identities = 124/177 (70%), Positives = 138/177 (77%)
Frame = +2
Query: 2 IKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQ 181
IKRN YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQ
Sbjct: 414 IKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 473
Query: 182 IEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXX 361
IEVTFDIDANGI+NVSAV+K TGKENKITITNDKGRLSK+DIERMV
Sbjct: 474 IEVTFDIDANGIMNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQR 533
Query: 362 XRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKD 532
+++AKN LESYA+ MK+TVEDEKLK KIS+ D++ I+DKC E IGWLDKNQ A ++
Sbjct: 534 DKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKQKILDKCNEVIGWLDKNQTAERE 590
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 246 bits (629), Expect = 2e-65
Identities = 125/177 (70%), Positives = 136/177 (76%)
Frame = +2
Query: 2 IKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQ 181
IKRN YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQ
Sbjct: 414 IKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 473
Query: 182 IEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXX 361
IEVTFDIDANGI+NVSAV+K TGKENKITITNDKGRLSK+DIERMV
Sbjct: 474 IEVTFDIDANGIMNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQR 533
Query: 362 XRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKD 532
+++AKN LESYA+ MK+TVEDEKLK KIS+ D+ I+DKC E I WLDKNQ A KD
Sbjct: 534 DKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKD 590
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 245 bits (625), Expect = 6e-65
Identities = 124/177 (70%), Positives = 138/177 (77%)
Frame = +2
Query: 2 IKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQ 181
IKRN YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQ
Sbjct: 414 IKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 473
Query: 182 IEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXX 361
IEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIERMV
Sbjct: 474 IEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQR 533
Query: 362 XRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKD 532
++++KNSLESYA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+
Sbjct: 534 DKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKE 590
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 245 bits (625), Expect = 6e-65
Identities = 124/177 (70%), Positives = 138/177 (77%)
Frame = +2
Query: 2 IKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQ 181
IKRN YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQ
Sbjct: 414 IKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 473
Query: 182 IEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXX 361
IEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIERMV
Sbjct: 474 IEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQR 533
Query: 362 XRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKD 532
++++KNSLESYA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+
Sbjct: 534 DKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKE 590
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 245 bits (625), Expect = 6e-65
Identities = 124/177 (70%), Positives = 138/177 (77%)
Frame = +2
Query: 2 IKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQ 181
IKRN YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQ
Sbjct: 414 IKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 473
Query: 182 IEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXX 361
IEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIERMV
Sbjct: 474 IEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQR 533
Query: 362 XRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKD 532
++++KNSLESYA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+
Sbjct: 534 DKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKE 590
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 244 bits (624), Expect = 7e-65
Identities = 125/177 (70%), Positives = 136/177 (76%)
Frame = +2
Query: 2 IKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQ 181
IKRN YSDNQPGVLIQVYEGERA+TKDNNLLGKFEL+GIPPAPRGVPQ
Sbjct: 413 IKRNTTIPTKTSETFTTYSDNQPGVLIQVYEGERALTKDNNLLGKFELSGIPPAPRGVPQ 472
Query: 182 IEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXX 361
IEVTFDIDANGILNVSA +K TGK+NKITITNDKGRLSKD+IERMV
Sbjct: 473 IEVTFDIDANGILNVSAQDKSTGKQNKITITNDKGRLSKDEIERMVQEAEKYKADDEAQK 532
Query: 362 XRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKD 532
RIAAKN+LESYA+ MK T+EDEKLKDKISE D+K I +KC E + WLD NQ A KD
Sbjct: 533 DRIAAKNALESYAFNMKQTIEDEKLKDKISEEDKKKIQEKCDETVRWLDGNQTAEKD 589
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 243 bits (621), Expect = 2e-64
Identities = 123/177 (69%), Positives = 138/177 (77%)
Frame = +2
Query: 2 IKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQ 181
IKRN YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQ
Sbjct: 414 IKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 473
Query: 182 IEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXX 361
IEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK+DIERMV
Sbjct: 474 IEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQR 533
Query: 362 XRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKD 532
++++KNSL+SYA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+
Sbjct: 534 DKVSSKNSLKSYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKE 590
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 243 bits (620), Expect = 2e-64
Identities = 122/177 (68%), Positives = 137/177 (77%)
Frame = +2
Query: 2 IKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQ 181
IKRN YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQ
Sbjct: 414 IKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQ 473
Query: 182 IEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXX 361
IEVTFDIDANGI+NVSA +K TGKENKITITNDKGRLSK+DIERMV
Sbjct: 474 IEVTFDIDANGIMNVSAADKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKCEDDVQR 533
Query: 362 XRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKD 532
++++KNSLESYA+ MK+TVEDEKL+ KIS+ D+ I++KC E IGWLDKNQ A K+
Sbjct: 534 DKVSSKNSLESYAFNMKSTVEDEKLQGKISDEDKTKILEKCNEVIGWLDKNQTAEKE 590
>sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A
Length = 640
Score = 242 bits (618), Expect = 4e-64
Identities = 124/177 (70%), Positives = 133/177 (75%)
Frame = +2
Query: 2 IKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQ 181
IKRN YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL+GIPPAPRGVPQ
Sbjct: 415 IKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQ 474
Query: 182 IEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXX 361
IEVTFDIDANGILNVSA +K TGK+NKITITNDKGRLSKDDIERMV
Sbjct: 475 IEVTFDIDANGILNVSATDKSTGKQNKITITNDKGRLSKDDIERMVNEAEKYKADDEAQK 534
Query: 362 XRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKD 532
RI AKN LESYA+ +K T+EDEKLKDKIS D+K I DKC E + WLD NQ A K+
Sbjct: 535 DRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKE 591
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 240 bits (612), Expect = 2e-63
Identities = 121/177 (68%), Positives = 133/177 (75%)
Frame = +2
Query: 2 IKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQ 181
IKRN YSDNQ VL+QVYEGERAMTKDNNLLGKF+L GIPPAPRGVPQ
Sbjct: 417 IKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQ 476
Query: 182 IEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSKDDIERMVAXXXXXXXXXXXXX 361
IEVTFDIDANGILNV+A +K TGKENKITITNDKGRLSKDDI+RMV
Sbjct: 477 IEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANR 536
Query: 362 XRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKD 532
R+AAKN+LESY Y +K TVEDEKL+ KISE D+ I+DKCQE I WLD+NQ A KD
Sbjct: 537 DRVAAKNALESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKD 593
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,878,652
Number of Sequences: 369166
Number of extensions: 742921
Number of successful extensions: 2971
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2844
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3600891075
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)