Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_022_L20
(550 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q10344|TCTP_SCHPO Translationally-controlled tumor prote... 173 3e-43
sp|P91800|TCTP_SCHJA Translationally-controlled tumor prote... 172 6e-43
sp|Q95VY2|TCTP_BRABE Translationally-controlled tumor prote... 157 1e-38
sp|Q98SJ7|TCTP_LABRO Translationally-controlled tumor prote... 155 6e-38
sp|Q9DGK4|TCTP_BRARE Translationally-controlled tumor prote... 154 1e-37
sp|Q9VGS2|TCTP_DROME Translationally-controlled tumor prote... 150 2e-36
sp|P35691|TCTP_YEAST Translationally-controlled tumor prote... 145 8e-35
sp|P13693|TCTP_HUMAN Translationally-controlled tumor prote... 144 1e-34
sp|Q5E984|TCTP_BOVIN Translationally-controlled tumor prote... 144 1e-34
sp|Q60FS1|TCTP_PLUXY Translationally-controlled tumor prote... 143 2e-34
>sp|Q10344|TCTP_SCHPO Translationally-controlled tumor protein homolog (TCTP) (p23fyp)
Length = 168
Score = 173 bits (438), Expect = 3e-43
Identities = 90/165 (54%), Positives = 116/165 (70%)
Frame = +3
Query: 3 YKDIISGDEIGSDSYPMKLVDDIVYEFDGKNITIKNGIPEDKIGGNKSADVDDEEYSDTT 182
YKD+ISGDE+ SD+Y +K VDDIVYE D + +T+K G D IG N SA+ +E + T
Sbjct: 4 YKDVISGDELVSDAYDLKEVDDIVYEADCQMVTVKQGGDVD-IGANPSAEDAEENAEEGT 62
Query: 183 ETQIDIVYANRLVEISYGKKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEIL 362
ET ++VY+ RL S+ KK Y +YIK YMK I L+ NP+RV VF+ NA +V +IL
Sbjct: 63 ETVNNLVYSFRLSPTSFDKKSYMSYIKGYMKAIKARLQESNPERVPVFEKNAIGFVKKIL 122
Query: 363 KNFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEK 497
NFK+Y FY GE+M+P+AMV+L NYRED ITPY I FKDG+ EK
Sbjct: 123 ANFKDYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGLVSEK 167
>sp|P91800|TCTP_SCHJA Translationally-controlled tumor protein homolog (TCTP)
Length = 169
Score = 172 bits (435), Expect = 6e-43
Identities = 78/165 (47%), Positives = 115/165 (69%)
Frame = +3
Query: 3 YKDIISGDEIGSDSYPMKLVDDIVYEFDGKNITIKNGIPEDKIGGNKSADVDDEEYSDTT 182
+KD ISGDE+ SDS+ +L++D+VYE D IT+ NG+ I N S + EE SD+T
Sbjct: 4 FKDAISGDEMFSDSHSPQLINDVVYEVDANFITVSNGLDSKLIAANPSGEEGQEEVSDST 63
Query: 183 ETQIDIVYANRLVEISYGKKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEIL 362
E ID+V+A+RLV S+ KK Y Y+K Y+K I + L+ +NP+RV++F++ +Y+ +
Sbjct: 64 ERVIDLVHASRLVSTSFDKKSYRAYLKGYLKAIKERLQKENPERVSIFESRINEYMVNVF 123
Query: 363 KNFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEK 497
KNF +Y+ Y GE+MNP+ MV L N+RE+ +TPYF+ KDG+ EEK
Sbjct: 124 KNFDDYEHYIGESMNPDGMVALMNFRENGVTPYFVFLKDGLIEEK 168
>sp|Q95VY2|TCTP_BRABE Translationally-controlled tumor protein (TCTP)
Length = 169
Score = 157 bits (398), Expect = 1e-38
Identities = 78/165 (47%), Positives = 108/165 (65%)
Frame = +3
Query: 3 YKDIISGDEIGSDSYPMKLVDDIVYEFDGKNITIKNGIPEDKIGGNKSADVDDEEYSDTT 182
YKDI+SGDE+ SD+Y MK++DD YE +GK T K GI E IGGN SA+ E ++
Sbjct: 4 YKDIVSGDEMFSDAYKMKVLDDYFYELEGKITTEKGGIDESAIGGNASAEDAVEGLEESG 63
Query: 183 ETQIDIVYANRLVEISYGKKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEIL 362
T +IV A RL E + K +Y YIK+Y K++L+ L P+RV+ FK + + ++
Sbjct: 64 TTGCNIVIAQRLQETQFTKAQYKVYIKDYSKKVLEYLTKNKPERVDGFKAASAAGMKRVM 123
Query: 363 KNFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEK 497
NFK ++F+TGE M+ + MV L +YRED TPY + FKDG+EEEK
Sbjct: 124 GNFKNWQFFTGEKMDQDGMVALMDYREDGKTPYMLFFKDGLEEEK 168
>sp|Q98SJ7|TCTP_LABRO Translationally-controlled tumor protein (TCTP)
Length = 171
Score = 155 bits (392), Expect = 6e-38
Identities = 82/168 (48%), Positives = 113/168 (67%), Gaps = 2/168 (1%)
Frame = +3
Query: 3 YKDIISGDEIGSDSYPMKLVDD-IVYEFDGKNITIKNGIPEDK-IGGNKSADVDDEEYSD 176
YKDII+GDE+ SD Y +K ++ ++ E +GK I+ G +D IGGN SA+V DE
Sbjct: 4 YKDIITGDEMFSDIYKIKESENGMMIEVEGKMISRAEGEIDDALIGGNASAEVQDEGCES 63
Query: 177 TTETQIDIVYANRLVEISYGKKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTE 356
TT + +DIV ++L E SY KK YT YIK+YMK + L+ PDRV+ F NA V +
Sbjct: 64 TTVSGVDIVLNHKLQETSYDKKSYTAYIKDYMKAVKAKLQEVAPDRVDPFMANAPAEVKK 123
Query: 357 ILKNFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEKC 500
IL N K ++F+TGE+MNP+ M+ L ++RED +TPY + FKDG+E EKC
Sbjct: 124 ILGNIKNFQFFTGESMNPDGMIGLLDFREDGVTPYMLFFKDGLEIEKC 171
>sp|Q9DGK4|TCTP_BRARE Translationally-controlled tumor protein (TCTP)
Length = 171
Score = 154 bits (389), Expect = 1e-37
Identities = 82/168 (48%), Positives = 113/168 (67%), Gaps = 2/168 (1%)
Frame = +3
Query: 3 YKDIISGDEIGSDSYPMKLVDD-IVYEFDGKNITIKNGIPEDK-IGGNKSADVDDEEYSD 176
YKDII+GDE+ SD Y +K ++ ++ E +GK IT G +D IGGN SA+V DE
Sbjct: 4 YKDIITGDEMFSDIYKIKESENGMMLEVEGKMITRAEGDIDDALIGGNASAEVADEGCDS 63
Query: 177 TTETQIDIVYANRLVEISYGKKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTE 356
T+ + +DIV ++L E SY KK YT YIK+YMK + L+ P+RV+ F NA V +
Sbjct: 64 TSVSGVDIVLNHKLQETSYDKKSYTAYIKDYMKAVKAKLQESAPNRVDPFMANAPAEVKK 123
Query: 357 ILKNFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEKC 500
IL N K ++F+TGE+MNP+ M+ L ++RED +TPY I FKDG+E EKC
Sbjct: 124 ILGNIKNFQFFTGESMNPDGMIGLLDFREDGVTPYMIFFKDGLEIEKC 171
>sp|Q9VGS2|TCTP_DROME Translationally-controlled tumor protein homolog (TCTP)
Length = 172
Score = 150 bits (380), Expect = 2e-36
Identities = 82/170 (48%), Positives = 115/170 (67%), Gaps = 4/170 (2%)
Frame = +3
Query: 3 YKDIISGDEIGSDSYPMKLVDDIVYEFDGKNITIKNGIPEDKIGGNKSADVDDEEYSDTT 182
YKDII+GDE+ +D+Y MKLVDD++YE GK IT + G G N SA+ DE T+
Sbjct: 4 YKDIITGDEMFADTYKMKLVDDVIYEVYGKLIT-RQGDDIKLEGANASAEEADEGTDITS 62
Query: 183 ETQIDIVYANRLVE-ISYG-KKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTE 356
E+ +D+V +RL E ++G KK YT Y+K+YMK++L L+ K+PD+V++FKTN K + +
Sbjct: 63 ESGVDVVLNHRLTECFAFGDKKSYTLYLKDYMKKVLAKLEEKSPDQVDIFKTNMNKAMKD 122
Query: 357 ILKNFKEYKFYTGETMNPEAMVILCNYRE--DQITPYFIVFKDGIEEEKC 500
IL FKE +F+TGE+M+ + MV L YRE P + FK G+EEEKC
Sbjct: 123 ILGRFKELQFFTGESMDCDGMVALVEYREINGDSVPVLMFFKHGLEEEKC 172
>sp|P35691|TCTP_YEAST Translationally-controlled tumor protein homolog (TCTP)
Length = 167
Score = 145 bits (365), Expect = 8e-35
Identities = 71/165 (43%), Positives = 109/165 (66%)
Frame = +3
Query: 3 YKDIISGDEIGSDSYPMKLVDDIVYEFDGKNITIKNGIPEDKIGGNKSADVDDEEYSDTT 182
YKDI S DE+ SD+Y KLVDD++YE D + + G IG N SA+ D++ +
Sbjct: 4 YKDIFSNDELLSDAYDAKLVDDVIYEADCAMVNV--GGDNIDIGANPSAEGGDDDVEEGA 61
Query: 183 ETQIDIVYANRLVEISYGKKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTEIL 362
E ++V++ RL + ++ KK + TYIK YMK + L+ NP+ V F+ AQ YV +++
Sbjct: 62 EMVNNVVHSFRLQQTAFDKKSFLTYIKGYMKAVKAKLQETNPEEVPKFEKGAQTYVKKVI 121
Query: 363 KNFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEK 497
+FK+++F+TGE+M+P+AMV++ NYRED TP+ ++K GI EEK
Sbjct: 122 GSFKDWEFFTGESMDPDAMVVMLNYREDGTTPFVAIWKHGIVEEK 166
>sp|P13693|TCTP_HUMAN Translationally-controlled tumor protein (TCTP) (p23)
(Histamine-releasing factor) (HRF) (Fortilin)
sp|P61288|TCTP_PIG Translationally-controlled tumor protein (TCTP)
Length = 172
Score = 144 bits (364), Expect = 1e-34
Identities = 77/169 (45%), Positives = 109/169 (64%), Gaps = 3/169 (1%)
Frame = +3
Query: 3 YKDIISGDEIGSDSYPMK-LVDDIVYEFDGKNITIKNG-IPEDKIGGNKSADVDDEEYSD 176
Y+D+IS DE+ SD Y ++ + D + E +GK ++ G I + IGGN SA+ + E ++
Sbjct: 4 YRDLISHDEMFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTE 63
Query: 177 TTE-TQIDIVYANRLVEISYGKKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVT 353
+T T +DIV + L E S+ K+ Y YIK+YMK I L+ + P+RV F T A + +
Sbjct: 64 STVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIK 123
Query: 354 EILKNFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEKC 500
IL NFK Y+F+ GE MNP+ MV L +YRED +TPY I FKDG+E EKC
Sbjct: 124 HILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172
>sp|Q5E984|TCTP_BOVIN Translationally-controlled tumor protein (TCTP)
Length = 172
Score = 144 bits (363), Expect = 1e-34
Identities = 78/169 (46%), Positives = 109/169 (64%), Gaps = 3/169 (1%)
Frame = +3
Query: 3 YKDIISGDEIGSDSYPMKLV-DDIVYEFDGKNITIKNG-IPEDKIGGNKSADVDDEEYSD 176
Y+D+IS DE+ SD Y ++ V D + E +GK ++ G I + IGGN SA+ + E ++
Sbjct: 4 YRDLISHDEMFSDIYKIREVADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTE 63
Query: 177 TTE-TQIDIVYANRLVEISYGKKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVT 353
+T T +DIV + L E S+ K+ Y YIK+YMK I L+ + P+RV F T A + +
Sbjct: 64 STVITGVDIVMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIK 123
Query: 354 EILKNFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEKC 500
IL NFK Y+F+ GE MNP+ MV L +YRED +TPY I FKDG+E EKC
Sbjct: 124 HILANFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172
>sp|Q60FS1|TCTP_PLUXY Translationally-controlled tumor protein homolog (TCTP)
Length = 172
Score = 143 bits (361), Expect = 2e-34
Identities = 79/169 (46%), Positives = 115/169 (68%), Gaps = 4/169 (2%)
Frame = +3
Query: 3 YKDIISGDEIGSDSYPMKLVDDIVYEFDGKNITIKNGIPEDKIGGNKSADVDDEEYSDTT 182
YKDII+GDE+ SD+Y MKLVD+++YE GK +T +G + + G N SA+ DE T
Sbjct: 4 YKDIITGDEMFSDTYKMKLVDEVIYEVTGKLVTRTHGDVQIE-GFNPSAEEADEGTDAAT 62
Query: 183 ETQIDIVYANRLVEI-SYG-KKEYTTYIKEYMKRILDLLKTKNPDRVNVFKTNAQKYVTE 356
E+ +DIV +RL+E ++G KK YT Y+K+YMK+++ L+ PD+V+VFKTN K + +
Sbjct: 63 ESGVDIVLNHRLMETYAFGDKKSYTLYLKDYMKKLVAKLEETAPDQVDVFKTNMNKVMKD 122
Query: 357 ILKNFKEYKFYTGETMNPEAMVILCNYRE--DQITPYFIVFKDGIEEEK 497
IL FKE +F+TGE+M+ + MV +C YR+ TP + FK G+ EEK
Sbjct: 123 ILGRFKELQFFTGESMDCDGMVAMCEYRDINGVSTPVMMFFKHGLLEEK 171
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,524,502
Number of Sequences: 369166
Number of extensions: 1367097
Number of successful extensions: 4383
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4323
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 3833118120
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)