Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_022_L16
(738 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P24643|CALX_CANFA Calnexin precursor (pp90) 135 9e-32
sp|P35565|CALX_RAT Calnexin precursor 135 1e-31
sp|P35564|CALX_MOUSE Calnexin precursor 135 1e-31
sp|Q5R440|CALX_PONPY Calnexin precursor 134 3e-31
sp|P27824|CALX_HUMAN Calnexin precursor (Major histocompati... 134 3e-31
sp|O14967|CLGN_HUMAN Calmegin precursor 110 3e-24
sp|P52194|CLGN_MOUSE Calmegin precursor (MEG 1 antigen) (Ca... 108 2e-23
sp|Q38798|CALX2_ARATH Calnexin homolog 2 precursor 103 6e-22
sp|P29402|CALX1_ARATH Calnexin homolog 1 precursor 101 2e-21
sp|Q39817|CALX_SOYBN Calnexin homolog precursor 100 3e-21
>sp|P24643|CALX_CANFA Calnexin precursor (pp90)
Length = 593
Score = 135 bits (341), Expect = 9e-32
Identities = 63/144 (43%), Positives = 84/144 (58%)
Frame = +1
Query: 1 NPNYKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVF 180
NPNYKG W PMIDNP Y+G+WK R+I N D+FED +P+KMTP AIGLELWSM+ +I F
Sbjct: 377 NPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSAIGLELWSMTSDIFF 436
Query: 181 DNFIIVDNKKAADDFAAETWVVKKDAERRADPNSQSVVDAIREATSERXXXXXXXXXXXX 360
DNFI+ +++ DD+A + W +KK A+ A+P VV + EA ER
Sbjct: 437 DNFIVCGDRRVVDDWANDGWGLKKAADGAAEP---GVVGQMIEAAEERPWLWVVYVLTVA 493
Query: 361 XXXXXXXXYCCRNSGSDKSAEYER 432
+CC EY++
Sbjct: 494 LPVFLVILFCCSGKKQSSPVEYKK 517
>sp|P35565|CALX_RAT Calnexin precursor
Length = 591
Score = 135 bits (340), Expect = 1e-31
Identities = 63/144 (43%), Positives = 85/144 (59%)
Frame = +1
Query: 1 NPNYKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVF 180
NPNYKG W PMIDNP Y+G+WK R+I N D+FED +P++MTP AIGLELWSM+ +I F
Sbjct: 377 NPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFF 436
Query: 181 DNFIIVDNKKAADDFAAETWVVKKDAERRADPNSQSVVDAIREATSERXXXXXXXXXXXX 360
DNFII +++ DD+A + W +KK A+ A+P VV + EA ER
Sbjct: 437 DNFIISGDRRVVDDWANDGWGLKKAADGAAEP---GVVGQMLEAAEERPWLWVVYILTVA 493
Query: 361 XXXXXXXXYCCRNSGSDKSAEYER 432
+CC + EY++
Sbjct: 494 LPVFLVILFCCSGKKQSNAMEYKK 517
>sp|P35564|CALX_MOUSE Calnexin precursor
Length = 591
Score = 135 bits (340), Expect = 1e-31
Identities = 64/144 (44%), Positives = 85/144 (59%)
Frame = +1
Query: 1 NPNYKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVF 180
NPNYKG W PMIDNP Y+G+WK R+I N D+FED +P+KMTP AIGLELWSM+ +I F
Sbjct: 377 NPNYKGKWKPPMIDNPNYQGIWKPRKIPNPDFFEDLEPFKMTPFSAIGLELWSMTSDIFF 436
Query: 181 DNFIIVDNKKAADDFAAETWVVKKDAERRADPNSQSVVDAIREATSERXXXXXXXXXXXX 360
DNFII +++ DD+A + W +KK A+ A+P VV + EA ER
Sbjct: 437 DNFIISGDRRVVDDWANDGWGLKKAADGAAEP---GVVLQMLEAAEERPWLWVVYILTVA 493
Query: 361 XXXXXXXXYCCRNSGSDKSAEYER 432
+CC + EY++
Sbjct: 494 LPVFLVILFCCSGKKQSNAMEYKK 517
>sp|Q5R440|CALX_PONPY Calnexin precursor
Length = 592
Score = 134 bits (337), Expect = 3e-31
Identities = 63/144 (43%), Positives = 85/144 (59%)
Frame = +1
Query: 1 NPNYKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVF 180
NPNYKG W PMIDNP Y+G+WK R+I N D+FED +P++MTP AIGLELWSM+ +I F
Sbjct: 376 NPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFF 435
Query: 181 DNFIIVDNKKAADDFAAETWVVKKDAERRADPNSQSVVDAIREATSERXXXXXXXXXXXX 360
DNFII +++ DD+A + W +KK A+ A+P VV + EA ER
Sbjct: 436 DNFIICADRRIVDDWANDGWGLKKAADGAAEP---GVVGQMIEAAEERPWLWVVYILTVA 492
Query: 361 XXXXXXXXYCCRNSGSDKSAEYER 432
+CC + EY++
Sbjct: 493 LPVFLVILFCCSGKKQTSAMEYKK 516
>sp|P27824|CALX_HUMAN Calnexin precursor (Major histocompatibility complex class I
antigen-binding protein p88) (p90) (IP90)
Length = 592
Score = 134 bits (336), Expect = 3e-31
Identities = 63/144 (43%), Positives = 84/144 (58%)
Frame = +1
Query: 1 NPNYKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVF 180
NPNYKG W PMIDNP Y+G+WK R+I N D+FED +P++MTP AIGLELWSM+ +I F
Sbjct: 376 NPNYKGKWKPPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFF 435
Query: 181 DNFIIVDNKKAADDFAAETWVVKKDAERRADPNSQSVVDAIREATSERXXXXXXXXXXXX 360
DNFII +++ DD+A + W +KK A+ A+P VV + EA ER
Sbjct: 436 DNFIICADRRIVDDWANDGWGLKKAADGAAEP---GVVGQMIEAAEERPWLWVVYILTVA 492
Query: 361 XXXXXXXXYCCRNSGSDKSAEYER 432
+CC EY++
Sbjct: 493 LPVFLVILFCCSGKKQTSGMEYKK 516
>sp|O14967|CLGN_HUMAN Calmegin precursor
Length = 610
Score = 110 bits (276), Expect = 3e-24
Identities = 45/80 (56%), Positives = 58/80 (72%)
Frame = +1
Query: 1 NPNYKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVF 180
NP YKGVW P++DNP Y+G+W R+I N DYFED P+ +T A+GLELWSM+ +I F
Sbjct: 365 NPKYKGVWRPPLVDNPNYQGIWSPRKIPNPDYFEDDHPFLLTSFSALGLELWSMTSDIYF 424
Query: 181 DNFIIVDNKKAADDFAAETW 240
DNFII K+ AD +AA+ W
Sbjct: 425 DNFIICSEKEVADHWAADGW 444
>sp|P52194|CLGN_MOUSE Calmegin precursor (MEG 1 antigen) (Calnexin-T) (A2/6)
Length = 611
Score = 108 bits (269), Expect = 2e-23
Identities = 50/108 (46%), Positives = 68/108 (62%)
Frame = +1
Query: 1 NPNYKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVF 180
NP YKG+W PMI+NP Y+G+W ++I N DYFED P+ +T A+GLELWSM+ +I F
Sbjct: 365 NPKYKGIWRPPMINNPNYQGLWSPQKIPNPDYFEDDHPFLLTSFSALGLELWSMTPDIYF 424
Query: 181 DNFIIVDNKKAADDFAAETWVVKKDAERRADPNSQSVVDAIREATSER 324
DNFII K+ AD +A + W +K A+ N V+ + A ER
Sbjct: 425 DNFIICSEKEVADQWATDGWELKIMV---ANANEPGVLRQLVIAAEER 469
>sp|Q38798|CALX2_ARATH Calnexin homolog 2 precursor
Length = 532
Score = 103 bits (256), Expect = 6e-22
Identities = 47/105 (44%), Positives = 68/105 (64%), Gaps = 3/105 (2%)
Frame = +1
Query: 1 NPNYKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVF 180
NP YKG W++P+IDNP YKG+WK R I N DYFE +P + PI AIG+E+W+M D I+F
Sbjct: 325 NPAYKGKWSSPLIDNPAYKGIWKPRDIPNPDYFELERP-NLEPIAAIGIEIWTMQDGILF 383
Query: 181 DNFIIVDNKKAADDFAAETWVVKKDAER---RADPNSQSVVDAIR 306
DN +I ++K A+ + TW K D E+ +A+ + D ++
Sbjct: 384 DNILISKDEKVAETYRQSTWKPKFDVEKEKQKAEDEAAGEADGLK 428
>sp|P29402|CALX1_ARATH Calnexin homolog 1 precursor
Length = 530
Score = 101 bits (252), Expect = 2e-21
Identities = 47/105 (44%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Frame = +1
Query: 1 NPNYKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVF 180
NP YKG W++P+IDNP YKG+WK R I N DYFE +P PI AIG+E+W+M D I+F
Sbjct: 323 NPAYKGKWSSPLIDNPAYKGIWKPRDIPNPDYFELDRP-DYEPIAAIGIEIWTMQDGILF 381
Query: 181 DNFIIVDNKKAADDFAAETWVVKKDAER---RADPNSQSVVDAIR 306
DN +I ++K A+ + TW K D E+ +A+ + D ++
Sbjct: 382 DNILIAKDEKVAETYRQTTWKPKFDVEKEKQKAEEEAAGSADGLK 426
>sp|Q39817|CALX_SOYBN Calnexin homolog precursor
Length = 546
Score = 100 bits (250), Expect = 3e-21
Identities = 45/88 (51%), Positives = 59/88 (67%)
Frame = +1
Query: 1 NPNYKGVWTAPMIDNPKYKGVWKARRIANADYFEDAQPYKMTPIGAIGLELWSMSDEIVF 180
NP YKG W+AP IDNP YKG+WK R I N +YFE A+P PI AIG+E+W+M D I+F
Sbjct: 332 NPAYKGKWSAPYIDNPSYKGIWKpreIPNPEYFELAKP-DFEPIAAIGIEIWTMQDGILF 390
Query: 181 DNFIIVDNKKAADDFAAETWVVKKDAER 264
DN +I ++ K A+ + TW K E+
Sbjct: 391 DNVLIANDDKVAESYRETTWKPKFTVEK 418
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.311 0.128 0.379
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,458,558
Number of Sequences: 369166
Number of extensions: 1364454
Number of successful extensions: 2870
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2822
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6631293200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)