Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_022_I16
(761 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q05870|MYSP_SCHJA Paramyosin (Antigen Sj97) 273 5e-73
sp|P06198|MYSP_SCHMA Paramyosin 270 3e-72
sp|P35417|MYSP_ECHGR Paramyosin 255 1e-67
sp|P35418|MYSP_TAESO Paramyosin (Antigen B) (AgB) 255 1e-67
sp|Q8T305|MYSP_TAESA Paramyosin 253 5e-67
sp|O96064|MYSP_MYTGA Paramyosin 208 1e-53
sp|P05661|MYSA_DROME Myosin heavy chain, muscle 160 3e-39
sp|P02565|MYH3_CHICK Myosin heavy chain, fast skeletal musc... 152 1e-36
sp|Q90339|MYSS_CYPCA Myosin heavy chain, fast skeletal muscle 151 2e-36
sp|P24733|MYS_AEQIR Myosin heavy chain, striated muscle 149 8e-36
>sp|Q05870|MYSP_SCHJA Paramyosin (Antigen Sj97)
Length = 866
Score = 273 bits (697), Expect = 5e-73
Identities = 142/190 (74%), Positives = 167/190 (87%)
Frame = +3
Query: 3 LADELRQEQDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELET 182
LADELRQEQ+NYK A++LRK LEIEIREIT+KLEEAEA+ATREG+R +QKLQ R+RELE
Sbjct: 682 LADELRQEQENYKHAEALRKQLEIEIREITVKLEEAEAFATREGRRMVQKLQARVRELEA 741
Query: 183 DFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE 362
+F+ E RRCK+ALAQARKFERQ+KELQ QA+DDRRMV+ELQDLLDKTQ+KM+AYKRQLEE
Sbjct: 742 EFDGESRRCKDALAQARKFERQYKELQTQAEDDRRMVLELQDLLDKTQMKMKAYKRQLEE 801
Query: 363 IEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVN 542
+E+VS + MNKYRKAQQQIE+AEHRADMAER +TVRR G PG RA+SV RE S V
Sbjct: 802 MEEVSQITMNKYRKAQQQIEEAEHRADMAERTVTVRRVG---PGG--RAVSVARELS-VT 855
Query: 543 TSRGARATSI 572
++RG RATS+
Sbjct: 856 SNRGMRATSM 865
Score = 48.9 bits (115), Expect = 1e-05
Identities = 31/146 (21%), Positives = 69/146 (47%), Gaps = 1/146 (0%)
Frame = +3
Query: 3 LADELRQE-QDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELE 179
L E+ Q ++ ++ +SLRK+ I E+T+ + E E E R ++ + + +LE
Sbjct: 484 LKSEMEQRLRERDEELESLRKSTTRTIEELTVTITEMEVKYKSELSRLKKRYESSIADLE 543
Query: 180 TDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLE 359
+A + + + + ++ K+L+ DD+RR+ ++ L T+ K ++E
Sbjct: 544 IQLDATNKANANLMKENKNLAQRVKDLETFLDDERRLREAAENNLQITEHKRIQLANEVE 603
Query: 360 EIEDVSTVAMNKYRKAQQQIEDAEHR 437
E+ + A+ ++E+ + R
Sbjct: 604 ELRSAMENLERLRKHAETELEETQSR 629
>sp|P06198|MYSP_SCHMA Paramyosin
Length = 866
Score = 270 bits (690), Expect = 3e-72
Identities = 142/190 (74%), Positives = 166/190 (87%)
Frame = +3
Query: 3 LADELRQEQDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELET 182
LADELRQEQ NYK A++LRK LEIEIREIT+KLEEAEA ATREG+R +QKLQ R+RELE+
Sbjct: 682 LADELRQEQGNYKHAEALRKQLEIEIREITVKLEEAEASATREGRRMVQKLQARVRELES 741
Query: 183 DFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE 362
+F+ E RRCK+ALAQARKFERQ+KELQ QA+DDRRMV+ELQDLLDKTQ+KM+AYKRQLEE
Sbjct: 742 EFDGESRRCKDALAQARKFERQYKELQTQAEDDRRMVLELQDLLDKTQMKMKAYKRQLEE 801
Query: 363 IEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVN 542
+E+VS + MNKYRKAQQQIE+AEHRADMAER +TVRR G PG RA+SV RE S V
Sbjct: 802 MEEVSQITMNKYRKAQQQIEEAEHRADMAERTVTVRRVG---PGG--RAVSVARELS-VT 855
Query: 543 TSRGARATSI 572
++RG RATS+
Sbjct: 856 SNRGMRATSM 865
Score = 49.3 bits (116), Expect = 1e-05
Identities = 31/146 (21%), Positives = 69/146 (47%), Gaps = 1/146 (0%)
Frame = +3
Query: 3 LADELRQE-QDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELE 179
L E+ Q ++ ++ +SLRK+ I E+T+ + E E E R ++ + + +LE
Sbjct: 484 LKSEMEQRLRERDEELESLRKSTTRTIEELTVTITEMEVKYKSELSRLKKRYESNIADLE 543
Query: 180 TDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLE 359
+ + + + + ++ K+L+ D++RR+ ++ L T+ K ++E
Sbjct: 544 IQLDTANKANANLMKENKNLSQRVKDLETFLDEERRLREAAENNLQITEHKRLQLANEIE 603
Query: 360 EIEDVSTVAMNKYRKAQQQIEDAEHR 437
EI + A+ ++E+A+ R
Sbjct: 604 EIRSTLENLERLRKHAETELEEAQSR 629
>sp|P35417|MYSP_ECHGR Paramyosin
Length = 863
Score = 255 bits (651), Expect = 1e-67
Identities = 133/190 (70%), Positives = 163/190 (85%)
Frame = +3
Query: 3 LADELRQEQDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELET 182
LADELRQEQ+NYK+A++LRK LEIEIREIT+KLEEAEA+ATREG+R +QKLQ R+RELE
Sbjct: 678 LADELRQEQENYKRAETLRKQLEIEIREITVKLEEAEAFATREGRRMVQKLQNRVRELEA 737
Query: 183 DFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE 362
+ + E RR KEA A ARK+ERQFKELQ Q++DD+RM++ELQDLLDKTQ+KM+AYKRQLEE
Sbjct: 738 ELDGEIRRAKEAFASARKYERQFKELQTQSEDDKRMILELQDLLDKTQIKMKAYKRQLEE 797
Query: 363 IEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVN 542
E+VS + M+KYRKAQQQIE+AEHRADMAER +T++R + G RA+SVVRE ++V
Sbjct: 798 QEEVSQLTMSKYRKAQQQIEEAEHRADMAERTITIKR---TIGGPGSRAVSVVREINSV- 853
Query: 543 TSRGARATSI 572
SRG RATSI
Sbjct: 854 -SRGNRATSI 862
Score = 47.4 bits (111), Expect = 4e-05
Identities = 32/146 (21%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Frame = +3
Query: 3 LADELRQE-QDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELE 179
L E+ Q ++ ++ ++LRK+ I E+T + E E + R +K + + ELE
Sbjct: 480 LKSEMEQRLREKDEELENLRKSTTRTIEELTTTISEMEVRFKSDMSRLKKKYEATISELE 539
Query: 180 TDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLE 359
+ + + + ++ +ELQ +D+RR + L ++ K A ++E
Sbjct: 540 VQLDVANKANASLNRENKALAQRVQELQTALEDERRAREAAESNLQVSERKRIALTSEVE 599
Query: 360 EIEDVSTVAMNKYRKAQQQIEDAEHR 437
EI ++ + A+ ++ DA R
Sbjct: 600 EIRSQLELSDRARKNAESELNDANGR 625
>sp|P35418|MYSP_TAESO Paramyosin (Antigen B) (AgB)
Length = 863
Score = 255 bits (651), Expect = 1e-67
Identities = 133/190 (70%), Positives = 163/190 (85%)
Frame = +3
Query: 3 LADELRQEQDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELET 182
LADELRQEQ+NYK+A++LRK LEIEIREIT+KLEEAEA+ATREG+R +QKLQ R+RELE
Sbjct: 678 LADELRQEQENYKRAETLRKQLEIEIREITVKLEEAEAFATREGRRMVQKLQNRVRELEA 737
Query: 183 DFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE 362
+ + E RR KEA A ARK+ERQFKELQ Q++DD+RM++ELQDLLDKTQ+KM+AYKRQLEE
Sbjct: 738 ELDGEIRRAKEAFANARKYERQFKELQTQSEDDKRMILELQDLLDKTQIKMKAYKRQLEE 797
Query: 363 IEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVN 542
E+VS + M+KYRKAQQQIE+AEHRADMAER +T++R + G RA+SVVRE ++V
Sbjct: 798 QEEVSQLTMSKYRKAQQQIEEAEHRADMAERTITIKR---TIGGPGSRAVSVVREINSV- 853
Query: 543 TSRGARATSI 572
SRG RATSI
Sbjct: 854 -SRGNRATSI 862
Score = 47.0 bits (110), Expect = 6e-05
Identities = 32/146 (21%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Frame = +3
Query: 3 LADELRQE-QDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELE 179
L E+ Q ++ ++ ++LRK+ I E+T + E E + R +K + + ELE
Sbjct: 480 LKSEMEQRLREKDEELENLRKSTTRTIEELTTTISEMEVRFKSDMSRLKKKYEATISELE 539
Query: 180 TDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLE 359
+ + + + ++ +ELQ +D+RR + L ++ K A ++E
Sbjct: 540 VQLDVANKANVNLNRENKTLAQRVQELQAALEDERRAREAAESNLQVSERKRIALASEVE 599
Query: 360 EIEDVSTVAMNKYRKAQQQIEDAEHR 437
EI ++ + A+ ++ DA R
Sbjct: 600 EIRSQLELSDRARKNAESELNDANGR 625
>sp|Q8T305|MYSP_TAESA Paramyosin
Length = 863
Score = 253 bits (645), Expect = 5e-67
Identities = 132/190 (69%), Positives = 162/190 (85%)
Frame = +3
Query: 3 LADELRQEQDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELET 182
LADELRQEQ+NY +A++LRK LEIEIREIT+KLEEAEA+ATREG+R +QKLQ R+RELE
Sbjct: 678 LADELRQEQENYXRAETLRKQLEIEIREITVKLEEAEAFATREGRRMVQKLQNRVRELEA 737
Query: 183 DFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE 362
+ + E RR KEA A ARK+ERQFKELQ Q++DD+RM++ELQDLLDKTQ+KM+AYKRQLEE
Sbjct: 738 ELDGEIRRAKEAFANARKYERQFKELQTQSEDDKRMILELQDLLDKTQIKMKAYKRQLEE 797
Query: 363 IEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVN 542
E+VS + M+KYRKAQQQIE+AEHRADMAER +T++R + G RA+SVVRE ++V
Sbjct: 798 QEEVSQLTMSKYRKAQQQIEEAEHRADMAERTITIKR---TIGGPGSRAVSVVREINSV- 853
Query: 543 TSRGARATSI 572
SRG RATSI
Sbjct: 854 -SRGNRATSI 862
Score = 47.4 bits (111), Expect = 4e-05
Identities = 32/146 (21%), Positives = 66/146 (45%), Gaps = 1/146 (0%)
Frame = +3
Query: 3 LADELRQE-QDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELE 179
L E+ Q ++ ++ ++LRK+ I E+T + E E + R +K + + ELE
Sbjct: 480 LKSEMEQRLREKDEELENLRKSTTRTIEELTTTISEMEVRFKSDMSRLKKKYEATISELE 539
Query: 180 TDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLE 359
+ + + + ++ +ELQ +D+RR + L ++ K A ++E
Sbjct: 540 VQLDVANKANANLNRENKTLAQRVQELQAALEDERRAREAAESNLQVSERKRIALASEVE 599
Query: 360 EIEDVSTVAMNKYRKAQQQIEDAEHR 437
EI ++ + A+ ++ DA R
Sbjct: 600 EIRSQLELSDRARKNAESELNDANGR 625
>sp|O96064|MYSP_MYTGA Paramyosin
Length = 864
Score = 208 bits (529), Expect = 1e-53
Identities = 110/180 (61%), Positives = 138/180 (76%), Gaps = 1/180 (0%)
Frame = +3
Query: 3 LADELRQEQDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELET 182
LADELRQEQDNYK A+SLRK LEIEIREIT++LEEAEA+A REGKR I KLQ R+R+LE
Sbjct: 691 LADELRQEQDNYKNAESLRKQLEIEIREITVRLEEAEAFAQREGKRQIAKLQARIRDLEN 750
Query: 183 DFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE 362
+ EA+QRR +EA A ARKFERQ+KE Q +D+DRR V EL + D+ +K + YKR +EE
Sbjct: 751 ELEADQRRLREAAASARKFERQWKETVQASDEDRRQVAELTSITDQLTMKCKTYKRMIEE 810
Query: 363 IEDVSTVAMNKYRKAQQQIEDAEHRADMAERHL-TVRRAGSVMPGSTYRAISVVRETSTV 539
EDV+++ MNKYRKAQ I++AE RADMAE++L TVRR+ R++SV RE + V
Sbjct: 811 AEDVASITMNKYRKAQSLIDEAEQRADMAEKNLQTVRRS---------RSMSVSREVTRV 861
Score = 47.4 bits (111), Expect = 4e-05
Identities = 35/155 (22%), Positives = 72/155 (46%), Gaps = 1/155 (0%)
Frame = +3
Query: 3 LADELRQE-QDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELE 179
L E+ Q ++ ++ DS+RK+ I E+ L E E E R +K + +RELE
Sbjct: 493 LRSEMEQRLREKDEEIDSIRKSSARAIDELQRTLVEVETRYKTEISRIKKKYETDIRELE 552
Query: 180 TDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLE 359
+ R E L Q + + + +EL+ Q ++ R + + ++ L ++ K +++LE
Sbjct: 553 GALDNANRANAEYLKQIKSLQNRNRELELQLEEATRQLDDTRNQLSVSERKRITIQQELE 612
Query: 360 EIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLT 464
+ + A + A+ ++ + R + +T
Sbjct: 613 DARSLLEHAERARKNAENELGEVTVRLTEVQLQVT 647
Score = 43.1 bits (100), Expect = 8e-04
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 1/146 (0%)
Frame = +3
Query: 15 LRQEQDNYKKADS-LRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFE 191
L + + YK S ++K E +IRE+ L+ A A E + I+ LQ R RELE E
Sbjct: 526 LVEVETRYKTEISRIKKKYETDIRELEGALDNANR-ANAEYLKQIKSLQNRNRELELQLE 584
Query: 192 AEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIED 371
R+ + Q ER+ +QQ+ +D R ++ + + ++ +L E++
Sbjct: 585 EATRQLDDTRNQLSVSERKRITIQQELEDARSLLEHAERARKNAENELGEVTVRLTEVQL 644
Query: 372 VSTVAMNKYRKAQQQIEDAEHRADMA 449
T N R+ + I + D A
Sbjct: 645 QVTALTNDKRRMEADIAAMQSDLDDA 670
Score = 40.8 bits (94), Expect = 0.004
Identities = 39/172 (22%), Positives = 69/172 (40%), Gaps = 14/172 (8%)
Frame = +3
Query: 3 LADELRQEQDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELET 182
L D Q + + + L +EIREITI+LE + +Q L R R+LE
Sbjct: 325 LEDTCEQLRTRCNTLEKTKNKLTVEIREITIELENTQI--------IVQDLTKRNRQLEN 376
Query: 183 DFEAEQRRCKEALAQARKFERQFKELQQQ-----------ADDDRRMVVE---LQDLLDK 320
+ A Q+RC + A+ + + L+ + A+ + + E LQ+ L +
Sbjct: 377 ENAALQKRCDDLSAENGQLRNEKANLEAECARLKVANAELAEKNANLERENAGLQNALRE 436
Query: 321 TQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRA 476
+++A R + E+ + + + D E AE L +A
Sbjct: 437 ANNELKAANRTINELTALKAQLEAERDNLASALRDTEEALRDAEAKLAAAQA 488
>sp|P05661|MYSA_DROME Myosin heavy chain, muscle
Length = 1962
Score = 160 bits (406), Expect = 3e-39
Identities = 90/191 (47%), Positives = 130/191 (68%)
Frame = +3
Query: 3 LADELRQEQDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELET 182
LADELR EQD+ + + LRK LE +I+E+ ++L+EAEA A + GK+AIQKL+ R+RELE
Sbjct: 1764 LADELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELEN 1823
Query: 183 DFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE 362
+ + EQRR +A RK ER+ KEL Q+++DR+ +QDL+DK Q K++ YKRQ+EE
Sbjct: 1824 ELDGEQRRHADAQKNLRKSERRVKELSFQSEEDRKNHERMQDLVDKLQQKIKTYKRQIEE 1883
Query: 363 IEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVN 542
E+++ + + K+RKAQQ++E+AE RAD+AE+ ++ RA RA SV R
Sbjct: 1884 AEEIAALNLAKFRKAQQELEEAEERADLAEQAISKFRAKG-------RAGSVGR-----G 1931
Query: 543 TSRGARATSIR 575
S RATS+R
Sbjct: 1932 ASPAPRATSVR 1942
Score = 52.4 bits (124), Expect = 1e-06
Identities = 33/140 (23%), Positives = 72/140 (51%)
Frame = +3
Query: 18 RQEQDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAE 197
R+ Q+ ++ ++ RK + + + LE AEA E R +KL+ + ELE +
Sbjct: 1573 RRIQEKEEEFENTRKNHQRALDSMQASLE-AEAKGKAEALRMKKKLEADINELEIALDHA 1631
Query: 198 QRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVS 377
+ EA +++++Q K++Q ++++R + ++ L ++ + A + +LEE +
Sbjct: 1632 NKANAEAQKNIKRYQQQLKDIQTALEEEQRARDDAREQLGISERRANALQNELEESRTLL 1691
Query: 378 TVAMNKYRKAQQQIEDAEHR 437
A R+A+Q++ DA +
Sbjct: 1692 EQADRGRRQAEQELADAHEQ 1711
Score = 50.4 bits (119), Expect = 5e-06
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Frame = +3
Query: 33 NYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCK 212
N K+ + + + E+ IT KLE+ + + +R I++LQ R+ ELE + EAE++
Sbjct: 1071 NKKELEQTIQRKDKELSSITAKLEDEQVVVLKH-QRQIKELQARIEELEEEVEAERQARA 1129
Query: 213 EALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE--IEDVSTVA 386
+A Q R+ +EL ++ ++ +L K + ++ +R LEE I+ ST+A
Sbjct: 1130 KAEKQRADLARELEELGERLEEAGGATSAQIELNKKREAELSKLRRDLEEANIQHESTLA 1189
Query: 387 MNKYRKAQQQIEDAEHRADMAER 455
N +K + + + D +
Sbjct: 1190 -NLRKKHNDAVAEMAEQVDQLNK 1211
Score = 49.3 bits (116), Expect = 1e-05
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 28/185 (15%)
Frame = +3
Query: 3 LADELRQEQDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAI----------QK 152
L D++ + N + + RK LE E E+ LEEAEA +E + + Q+
Sbjct: 1511 LLDQIGEGGRNIHEIEKARKRLEAEKDELQAALEEAEAALEQEENKVLRAQLELSQVRQE 1570
Query: 153 LQVRLRELETDFE------------------AEQRRCKEALAQARKFERQFKELQQQADD 278
+ R++E E +FE AE + EAL +K E EL+ D
Sbjct: 1571 IDRRIQEKEEEFENTRKNHQRALDSMQASLEAEAKGKAEALRMKKKLEADINELEIALDH 1630
Query: 279 DRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERH 458
+ E Q ++ Y++QL++I+ A++Q+ +E RA+ +
Sbjct: 1631 ANKANAE-------AQKNIKRYQQQLKDIQTALEEEQRARDDAREQLGISERRANALQNE 1683
Query: 459 LTVRR 473
L R
Sbjct: 1684 LEESR 1688
Score = 31.2 bits (69), Expect = 3.2
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 19/168 (11%)
Frame = +3
Query: 3 LADELRQEQDNYKKADSLRKTLEIEIREIT--IKL-EEAEAYATREGKRAIQKLQVRLRE 173
L L + +D+ ++ +R +E R++ +KL +EA A R K Q +Q + +E
Sbjct: 1026 LEQTLDELEDSLEREKKVRGDVEKSKRKVEGDLKLTQEAVADLERNKKELEQTIQRKDKE 1085
Query: 174 LETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQ 353
L + + ++ K +RQ KELQ + ++ V + K + + R+
Sbjct: 1086 LSSI----TAKLEDEQVVVLKHQRQIKELQARIEELEEEVEAERQARAKAEKQRADLARE 1141
Query: 354 LEEIED---------VSTVAMNKYRKAQ-----QQIEDA--EHRADMA 449
LEE+ + + + +NK R+A+ + +E+A +H + +A
Sbjct: 1142 LEELGERLEEAGGATSAQIELNKKREAELSKLRRDLEEANIQHESTLA 1189
Score = 30.4 bits (67), Expect = 5.4
Identities = 37/163 (22%), Positives = 66/163 (40%), Gaps = 25/163 (15%)
Frame = +3
Query: 9 DELRQ--EQDNYKKADSLRKTLEI--EIREITIKLEEAEAYATREGKRAIQKLQVRLREL 176
D LR+ E++ KAD R+ + E + K E + E + A +KLQ RL E
Sbjct: 1340 DNLREQVEEEAEGKADLQRQLSKANAEAQVWRSKYESDGVARSEELEEAKRKLQARLAEA 1399
Query: 177 ETDFEAEQRRCKEALAQARKFERQFKELQQQAD---------------------DDRRMV 293
E E+ ++C ++ + ++LQ + D + + V
Sbjct: 1400 EETIESLNQKCIGLEKTKQRLSTEVEDLQLEVDRANAIANAAEKKQKAFDKIIGEWKLKV 1459
Query: 294 VELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIE 422
+L LD +Q + R Y +L ++ Y + Q+Q+E
Sbjct: 1460 DDLAAELDASQKECRNYSTELFRLK-------GAYEEGQEQLE 1495
>sp|P02565|MYH3_CHICK Myosin heavy chain, fast skeletal muscle, embryonic
Length = 1940
Score = 152 bits (383), Expect = 1e-36
Identities = 73/160 (45%), Positives = 117/160 (73%)
Frame = +3
Query: 3 LADELRQEQDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELET 182
+A+EL++EQD + ++K L+ ++++ +L+EAE A + GK+ IQKL+ R+RELE
Sbjct: 1770 MAEELKKEQDTSAHLERMKKNLDQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVRELEG 1829
Query: 183 DFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE 362
+ +AEQ+R EA+ RK+ER+ KEL Q+++DR+ V+ LQDL+DK Q+K+++YKRQ EE
Sbjct: 1830 EVDAEQKRSAEAVKGVRKYERRVKELTYQSEEDRKNVLRLQDLVDKLQMKVKSYKRQAEE 1889
Query: 363 IEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAGS 482
E++S V ++K+RK Q ++E+AE RAD+AE + RA S
Sbjct: 1890 AEELSNVNLSKFRKIQHELEEAEERADIAESQVNKLRAKS 1929
Score = 47.4 bits (111), Expect = 4e-05
Identities = 32/137 (23%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Frame = +3
Query: 27 QDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRR 206
+++ ++ D K + EI +I K+E+ +A + K+ I++LQ R+ ELE + EAE+
Sbjct: 1075 ENDKQQLDEKLKKKDFEISQIQSKIEDEQALGMQLQKK-IKELQARIEELEEEIEAERTS 1133
Query: 207 CKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE--IEDVST 380
+A R+ +E+ ++ ++ D+ K + + + +R LEE ++ +T
Sbjct: 1134 RAKAEKHRADLSRELEEISERLEEAGGATAAQIDMNKKREAEFQKMRRDLEEATLQHEAT 1193
Query: 381 VAMNKYRKAQQQIEDAE 431
A + + A + E
Sbjct: 1194 AAALRKKHADSTADVGE 1210
Score = 41.6 bits (96), Expect = 0.002
Identities = 45/219 (20%), Positives = 85/219 (38%), Gaps = 36/219 (16%)
Frame = +3
Query: 3 LADELRQEQDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELET 182
L +++ + + + ++K +E E E+ LEEAEA E + I ++Q+ L ++++
Sbjct: 1517 LTEQIAEGGKAIHELEKVKKQIEQEKSELQTALEEAEASLEHE-EGKILRVQLELNQVKS 1575
Query: 183 D-----------------------------FEAEQRRCKEALAQARKFERQFKELQQQAD 275
D +AE R EAL +K E E++ Q
Sbjct: 1576 DIDRKIAEKDEEIDQLKRNHLRVVDSMQSTLDAEIRSRNEALRLKKKMEGDLNEIEIQLS 1635
Query: 276 DDRRMVVE-------LQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEH 434
R E Q +L TQ+ + R E++++ + + Q +IE+
Sbjct: 1636 HANRQAAEAQKNLRNTQGVLKDTQIHLDDALRSQEDLKEQVAMVERRANLLQAEIEELRA 1695
Query: 435 RADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVNTSR 551
+ ER V ++ S + + TS +NT +
Sbjct: 1696 ALEQTERSRKVAEQ-ELLDASERVQLLHTQNTSLINTKK 1733
Score = 34.3 bits (77), Expect = 0.38
Identities = 26/119 (21%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Frame = +3
Query: 39 KKADSLRK--TLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAE----- 197
K A+S ++ ++ E + +L ++EA ++ + LQ + +L+ +AE
Sbjct: 846 KSAESEKEMANMKEEFEKTKEELAKSEAKRKELEEKMVSLLQEK-NDLQLQVQAEADGLA 904
Query: 198 --QRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIE 368
+ RC + + + E + KEL ++A+D+ M EL K + + K+ ++++E
Sbjct: 905 DAEERCDQLIKTKIQLEAKIKELTERAEDEEEMNAELTAKKRKLEDECSELKKDIDDLE 963
Score = 32.7 bits (73), Expect = 1.1
Identities = 18/98 (18%), Positives = 46/98 (46%)
Frame = +3
Query: 150 KLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQL 329
+L++ + +L ++ E+ + R E Q E++ + ++ +R + ++ + Q
Sbjct: 1228 ELKMEIDDLASNMESVSKAKANLEKMCRSLEDQLSEIKTKEEEQQRTINDISAQKARLQT 1287
Query: 330 KMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRAD 443
+ Y RQ+EE + + + + QQIE+ + +
Sbjct: 1288 ESGEYSRQVEEKDALISQLSRGKQAFTQQIEELKRHLE 1325
>sp|Q90339|MYSS_CYPCA Myosin heavy chain, fast skeletal muscle
Length = 1935
Score = 151 bits (381), Expect = 2e-36
Identities = 71/160 (44%), Positives = 115/160 (71%)
Frame = +3
Query: 3 LADELRQEQDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELET 182
+A+EL++EQD + ++K LE+ ++++ +L+EAE+ A + GK+ +QKL+ R+RELE
Sbjct: 1766 MAEELKKEQDTSAHLERMKKNLEVTVKDLQHRLDEAESLAMKGGKKQLQKLESRVRELEA 1825
Query: 183 DFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE 362
+ EAEQRR +A+ RK+ER+ KEL Q ++D++ V+ LQDL+DK QLK++ YKRQ EE
Sbjct: 1826 EVEAEQRRGADAVKGVRKYERRVKELTYQTEEDKKNVIRLQDLVDKLQLKVKVYKRQAEE 1885
Query: 363 IEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAGS 482
E+ + +++YRK Q ++E+A+ RAD+AE + RA S
Sbjct: 1886 AEEQTNTHLSRYRKVQHELEEAQERADVAESQVNKLRAKS 1925
Score = 47.0 bits (110), Expect = 6e-05
Identities = 35/146 (23%), Positives = 72/146 (49%), Gaps = 3/146 (2%)
Frame = +3
Query: 3 LADELRQEQDNYKK-ADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELE 179
LA E + +N K+ +D K + EI ++ K+E+ ++ + K+ I++LQ R+ ELE
Sbjct: 1062 LAQESIMDLENEKQQSDEKIKKKDFEISQLLSKIEDEQSLGAQLQKK-IKELQARIEELE 1120
Query: 180 TDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLE 359
+ EAE+ + Q R+ +E+ ++ ++ ++ K + + + +R LE
Sbjct: 1121 EEIEAERAARAKVEKQRADLSRELEEISERLEEAGGATAAQIEMNKKREAEFQKMRRDLE 1180
Query: 360 E--IEDVSTVAMNKYRKAQQQIEDAE 431
E ++ +T A + +A E E
Sbjct: 1181 ESTLQHEATAAALRKEQADSVAELGE 1206
Score = 47.0 bits (110), Expect = 6e-05
Identities = 41/185 (22%), Positives = 80/185 (43%), Gaps = 9/185 (4%)
Frame = +3
Query: 3 LADELRQEQDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELET 182
L ++L + + + + +KT+E E EI LEEAE E + I ++Q+ L ++++
Sbjct: 1513 LTEQLGETGKSIHELEKAKKTVESEKSEIQTALEEAEGTLEHEESK-ILRVQLELNQVKS 1571
Query: 183 DFEAEQRRCKEALAQ-ARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLE 359
+ + + E + Q R +R +Q D + R + + K + + + QL
Sbjct: 1572 EIDRKLAEKDEEMEQIKRNSQRVIDSMQSTLDSEVRSRNDALRVKKKMEGDLNEMEIQLS 1631
Query: 360 EIEDVSTVAMNKYRKAQQQIEDAE--------HRADMAERHLTVRRAGSVMPGSTYRAIS 515
+ A + R Q Q++DA+ + DM E+ V R S+M +
Sbjct: 1632 HANRQAAEAQKQLRNVQGQLKDAQLHLDEAVRGQEDMKEQVAMVERRNSLMQAEIEELRA 1691
Query: 516 VVRET 530
+ +T
Sbjct: 1692 ALEQT 1696
Score = 35.8 bits (81), Expect = 0.13
Identities = 32/154 (20%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Frame = +3
Query: 18 RQEQDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGK-----RAIQKLQ-------V 161
R+ + + D TL+ E ++ E+A++ A + R QKL+ +
Sbjct: 1168 REAEFQKMRRDLEESTLQHEATAAALRKEQADSVAELGEQIDNLQRVKQKLEKEKSEYKM 1227
Query: 162 RLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRA 341
+ +L ++ EA + R E Q E++ ++D++ R + ++ + Q +
Sbjct: 1228 EIDDLTSNMEAVAKAKANLEKMCRTLEDQLSEIKTKSDENVRQLNDMNAQRARLQTENGE 1287
Query: 342 YKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRAD 443
+ RQLEE E + + + QQIE+ + +
Sbjct: 1288 FSRQLEEKEALVSQLTRGKQAYTQQIEELKRHIE 1321
Score = 31.6 bits (70), Expect = 2.4
Identities = 37/170 (21%), Positives = 67/170 (39%), Gaps = 27/170 (15%)
Frame = +3
Query: 3 LADELRQEQDNYK----KADSLRKT---LEIEIREITIKLEEAEAYATR----------- 128
LA L+ +++ + K SL KT L+ E+ ++ I +E A + A
Sbjct: 1394 LAQRLQDAEESIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANSLAANLDKKQRNFDKV 1453
Query: 129 ---------EGKRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDD 281
E + ++ Q R L T+ + +EAL +R+ K LQQ+ D
Sbjct: 1454 LAEWKQKYEESQAELEGAQKEARSLSTELFKMKNSYEEALDHLETLKRENKNLQQEISD- 1512
Query: 282 RRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAE 431
L + L +T + + E+E ++ + Q +E+AE
Sbjct: 1513 ------LTEQLGET-------GKSIHELEKAKKTVESEKSEIQTALEEAE 1549
>sp|P24733|MYS_AEQIR Myosin heavy chain, striated muscle
Length = 1938
Score = 149 bits (376), Expect = 8e-36
Identities = 80/182 (43%), Positives = 120/182 (65%)
Frame = +3
Query: 3 LADELRQEQDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELET 182
LADELR EQD+ + + +RK LE +++E I+L+EAEA + + GK+ IQKL+ R+ ELE
Sbjct: 1762 LADELRAEQDHSNQVEKVRKNLESQVKEFQIRLDEAEASSLKGGKKMIQKLESRVHELEA 1821
Query: 183 DFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE 362
+ + EQRR E RK +R+ KEL QAD+DR+ LQ+L+DK K++ +KRQ+EE
Sbjct: 1822 ELDNEQRRHAETQKNMRKADRRLKELAFQADEDRKNQERLQELIDKLNAKIKTFKRQVEE 1881
Query: 363 IEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAGSVMPGSTYRAISVVRETSTVN 542
E+++ + + KYRKAQ ++E+AE RAD A+ L RA S ++SV R + +V+
Sbjct: 1882 AEEIAAINLAKYRKAQHELEEAEERADTADSTLQKFRAKS------RSSVSVQRSSVSVS 1935
Query: 543 TS 548
S
Sbjct: 1936 AS 1937
Score = 50.8 bits (120), Expect = 4e-06
Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 7/155 (4%)
Frame = +3
Query: 12 ELRQEQDNYKKADSLRKTLE-------IEIREITIKLEEAEAYATREGKRAIQKLQVRLR 170
+L+ Q+N + + +++ LE EI + KLE+ E + +R I++LQ R+
Sbjct: 1055 DLKSTQENVEDLERVKRELEENVRRKEAEISSLNSKLED-EQNLVSQLQRKIKELQARIE 1113
Query: 171 ELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKR 350
ELE + EAE+ + Q + R+ +EL ++ D+ +L K + ++ +R
Sbjct: 1114 ELEEELEAERNARAKVEKQRAELNRELEELGERLDEAGGATSAQIELNKKREAELLKIRR 1173
Query: 351 QLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAER 455
LEE ++ RK Q + A AD ++
Sbjct: 1174 DLEEASLQHEAQISALRKKHQ--DAANEMADQVDQ 1206
Score = 47.4 bits (111), Expect = 4e-05
Identities = 41/186 (22%), Positives = 78/186 (41%), Gaps = 35/186 (18%)
Frame = +3
Query: 3 LADELRQEQDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQ----------K 152
L D+L + + + D R+ LE+E E+ LEEAE +E + ++ +
Sbjct: 1509 LTDQLSEGGRSTHELDKARRRLEMEKEELQAALEEAEGALEQEEAKVMRAQLEIATVRNE 1568
Query: 153 LQVRLRELETDF------------------EAEQRRCKEALAQARKFERQFKELQQQADD 278
+ R++E E +F EAE + +A+ +K E+ EL+ D
Sbjct: 1569 IDKRIQEKEEEFDNTRRNHQRALESMQASLEAEAKGKADAMRIKKKLEQDINELEVALDA 1628
Query: 279 DRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQ-------QIEDAEHR 437
R E++ + + Q ++R + +EE + A Y A++ ++E+
Sbjct: 1629 SNRGKAEMEKTVKRYQQQIREMQTSIEEEQRQRDEARESYNMAERRCTLMSGEVEELRAA 1688
Query: 438 ADMAER 455
+ AER
Sbjct: 1689 LEQAER 1694
Score = 46.2 bits (108), Expect = 1e-04
Identities = 28/139 (20%), Positives = 65/139 (46%)
Frame = +3
Query: 27 QDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRR 206
Q+ ++ D+ R+ + + + LE AEA + R +KL+ + ELE +A R
Sbjct: 1574 QEKEEEFDNTRRNHQRALESMQASLE-AEAKGKADAMRIKKKLEQDINELEVALDASNRG 1632
Query: 207 CKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVA 386
E +++++Q +E+Q ++++R E ++ + + + ++EE+ A
Sbjct: 1633 KAEMEKTVKRYQQQIREMQTSIEEEQRQRDEARESYNMAERRCTLMSGEVEELRAALEQA 1692
Query: 387 MNKYRKAQQQIEDAEHRAD 443
+ + ++ DA R +
Sbjct: 1693 ERARKASDNELADANDRVN 1711
Score = 42.0 bits (97), Expect = 0.002
Identities = 37/146 (25%), Positives = 71/146 (48%), Gaps = 7/146 (4%)
Frame = +3
Query: 42 KADSLR--KTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETDFEAEQRRCKE 215
KAD++R K LE +I E+ + L+ A E ++ +++ Q ++RE++T E EQR+ E
Sbjct: 1605 KADAMRIKKKLEQDINELEVALD-ASNRGKAEMEKTVKRYQQQIREMQTSIEEEQRQRDE 1663
Query: 216 ALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIED-----VST 380
A ER+ + + V EL+ L++ + +A +L + D S
Sbjct: 1664 ARESYNMAERRCTLMSGE-------VEELRAALEQAERARKASDNELADANDRVNELTSQ 1716
Query: 381 VAMNKYRKAQQQIEDAEHRADMAERH 458
V+ + +K + + + + D+ E H
Sbjct: 1717 VSSVQGQKRKLEGDINAMQTDLDEMH 1742
Score = 40.4 bits (93), Expect = 0.005
Identities = 45/183 (24%), Positives = 75/183 (40%), Gaps = 34/183 (18%)
Frame = +3
Query: 9 DELRQEQDNYKKADS----LRKTLEIEIREITIKLEEA----EAYATREGKR-------- 140
+EL + D A S L K E E+ +I LEEA EA + K+
Sbjct: 1141 EELGERLDEAGGATSAQIELNKKREAELLKIRRDLEEASLQHEAQISALRKKHQDAANEM 1200
Query: 141 -----AIQKLQVRLRELETDFEAEQ-------------RRCKEALAQARKFERQFKELQQ 266
+QK++ +L + + D + E + C E + ++FE Q +L
Sbjct: 1201 ADQVDQLQKVKSKLEKDKKDLKREMDDLESQMTHNMKNKGCSEKVM--KQFESQMSDLNA 1258
Query: 267 QADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADM 446
+ +D +R + ELQ + Q + RQLE+ E +V + + Q+EDA +
Sbjct: 1259 RLEDSQRSINELQSQKSRLQAENSDLTRQLEDAEHRVSVLSKEKSQLSSQLEDARRSLEE 1318
Query: 447 AER 455
R
Sbjct: 1319 ETR 1321
Score = 36.2 bits (82), Expect = 0.099
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 1/151 (0%)
Frame = +3
Query: 6 ADELRQEQDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELETD 185
+D RQ +D + L K E +++ +LE+A + E RA KLQ +R + D
Sbjct: 1282 SDLTRQLEDAEHRVSVLSK----EKSQLSSQLEDARR-SLEEETRARSKLQNEVRNMHAD 1336
Query: 186 FEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAY-KRQLEE 362
+A Q +E Q+ D +R + + + + + + K + + EE
Sbjct: 1337 MDA--------------IREQLEEEQESKSDVQRQLSKANNEIQQWRSKFESEGANRTEE 1382
Query: 363 IEDVSTVAMNKYRKAQQQIEDAEHRADMAER 455
+ED + K +A+Q E A + E+
Sbjct: 1383 LEDQKRKLLGKLSEAEQTTEAANAKCSALEK 1413
Score = 33.9 bits (76), Expect = 0.49
Identities = 30/120 (25%), Positives = 52/120 (43%)
Frame = +3
Query: 3 LADELRQEQDNYKKADSLRKTLEIEIREITIKLEEAEAYATREGKRAIQKLQVRLRELET 182
+ ++L +EQ++ EI++ K E A T E + +KL +L E E
Sbjct: 1340 IREQLEEEQESKSDVQRQLSKANNEIQQWRSKFESEGANRTEELEDQKRKLLGKLSEAEQ 1399
Query: 183 DFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEE 362
EA +C AL +A+ LQQ+ +D V +++ + K RA+ + E
Sbjct: 1400 TTEAANAKCS-ALEKAKS------RLQQELEDMSIEVDRANASVNQMEKKQRAFDKTTAE 1452
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,628,759
Number of Sequences: 369166
Number of extensions: 1016328
Number of successful extensions: 5481
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4355
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5262
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7018522000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)