Planarian EST Database


Dr_sW_022_H08

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_022_H08
         (698 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P92176|ACT2_LUMTE  Actin-2                                     419   e-117
sp|Q964E0|ACTC_BIOTE  Actin, cytoplasmic                          419   e-117
sp|Q964E1|ACTC_BIOOB  Actin, cytoplasmic                          419   e-117
sp|Q964E2|ACTC_BIOPF  Actin, cytoplasmic                          419   e-117
sp|P10984|ACT2_CAEEL  Actin-2                                     418   e-117
sp|Q26065|ACT_PLAMG  Actin, adductor muscle                       418   e-117
sp|P92179|ACTC_BIOGL  Actin, cytoplasmic                          418   e-117
sp|P41339|ACTA_LIMPO  Actin, acrosomal process isoform (Acti...   418   e-117
sp|Q964D9|ACTC_HELTI  Actin, cytoplasmic                          418   e-117
sp|Q964E3|ACTC_BIOAL  Actin, cytoplasmic                          418   e-117
>sp|P92176|ACT2_LUMTE Actin-2
          Length = 376

 Score =  419 bits (1076), Expect = e-117
 Identities = 207/222 (93%), Positives = 214/222 (96%), Gaps = 2/222 (0%)
 Frame = +3

Query: 3   SDEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 182
           ++EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
Sbjct: 2   AEEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS 61

Query: 183 KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 362
           KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
Sbjct: 62  KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 121

Query: 363 QIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 542
           QIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL
Sbjct: 122 QIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDL 181

Query: 543 AGRDLTDYLMKILTERGYSFTTTAEEN--RERYQENLYIALD 662
           AGRDLTDYLMKILTERGYSFTTTAE    R+  ++  Y+ALD
Sbjct: 182 AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
          Length = 376

 Score =  419 bits (1076), Expect = e-117
 Identities = 207/221 (93%), Positives = 212/221 (95%), Gaps = 2/221 (0%)
 Frame = +3

Query: 6   DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 185
           DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3   DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62

Query: 186 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 365
           RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122

Query: 366 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 545
           IMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 182

Query: 546 GRDLTDYLMKILTERGYSFTTTAEEN--RERYQENLYIALD 662
           GRDLTDYLMKILTERGYSFTTTAE    R+  ++  Y+ALD
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
          Length = 376

 Score =  419 bits (1076), Expect = e-117
 Identities = 207/221 (93%), Positives = 212/221 (95%), Gaps = 2/221 (0%)
 Frame = +3

Query: 6   DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 185
           DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3   DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62

Query: 186 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 365
           RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122

Query: 366 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 545
           IMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 182

Query: 546 GRDLTDYLMKILTERGYSFTTTAEEN--RERYQENLYIALD 662
           GRDLTDYLMKILTERGYSFTTTAE    R+  ++  Y+ALD
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
          Length = 376

 Score =  419 bits (1076), Expect = e-117
 Identities = 207/221 (93%), Positives = 212/221 (95%), Gaps = 2/221 (0%)
 Frame = +3

Query: 6   DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 185
           DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3   DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62

Query: 186 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 365
           RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122

Query: 366 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 545
           IMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 182

Query: 546 GRDLTDYLMKILTERGYSFTTTAEEN--RERYQENLYIALD 662
           GRDLTDYLMKILTERGYSFTTTAE    R+  ++  Y+ALD
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
>sp|P10984|ACT2_CAEEL Actin-2
          Length = 376

 Score =  418 bits (1075), Expect = e-117
 Identities = 207/221 (93%), Positives = 212/221 (95%), Gaps = 2/221 (0%)
 Frame = +3

Query: 6   DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 185
           D+DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3   DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62

Query: 186 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 365
           RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122

Query: 366 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 545
           IMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182

Query: 546 GRDLTDYLMKILTERGYSFTTTAEEN--RERYQENLYIALD 662
           GRDLTDYLMKILTERGYSFTTTAE    R+  ++  Y+ALD
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
>sp|Q26065|ACT_PLAMG Actin, adductor muscle
          Length = 376

 Score =  418 bits (1075), Expect = e-117
 Identities = 207/221 (93%), Positives = 213/221 (96%), Gaps = 2/221 (0%)
 Frame = +3

Query: 6   DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 185
           D++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3   DDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62

Query: 186 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 365
           RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122

Query: 366 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 545
           IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182

Query: 546 GRDLTDYLMKILTERGYSFTTTAEEN--RERYQENLYIALD 662
           GRDLTDYLMKILTERGYSFTTTAE    R+  ++  Y+ALD
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
          Length = 376

 Score =  418 bits (1074), Expect = e-117
 Identities = 206/221 (93%), Positives = 212/221 (95%), Gaps = 2/221 (0%)
 Frame = +3

Query: 6   DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 185
           DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3   DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62

Query: 186 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 365
           RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122

Query: 366 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 545
           IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLA 182

Query: 546 GRDLTDYLMKILTERGYSFTTTAEEN--RERYQENLYIALD 662
           GRDLTDYLMKILTERGYSFTTTAE    R+  ++  Y+ALD
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
>sp|P41339|ACTA_LIMPO Actin, acrosomal process isoform (Actin-5)
          Length = 376

 Score =  418 bits (1074), Expect = e-117
 Identities = 207/221 (93%), Positives = 212/221 (95%), Gaps = 2/221 (0%)
 Frame = +3

Query: 6   DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 185
           DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3   DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62

Query: 186 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 365
           RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122

Query: 366 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 545
           IMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 182

Query: 546 GRDLTDYLMKILTERGYSFTTTAEEN--RERYQENLYIALD 662
           GRDLTDYLMKILTERGYSFTTTAE    R+  ++  Y+ALD
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
          Length = 376

 Score =  418 bits (1074), Expect = e-117
 Identities = 206/221 (93%), Positives = 212/221 (95%), Gaps = 2/221 (0%)
 Frame = +3

Query: 6   DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 185
           DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3   DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62

Query: 186 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 365
           RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122

Query: 366 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 545
           IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVIDSGDGVTHTVPIYEGYALPHAIMRLDLA 182

Query: 546 GRDLTDYLMKILTERGYSFTTTAEEN--RERYQENLYIALD 662
           GRDLTDYLMKILTERGYSFTTTAE    R+  ++  Y+ALD
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
          Length = 376

 Score =  418 bits (1074), Expect = e-117
 Identities = 206/221 (93%), Positives = 212/221 (95%), Gaps = 2/221 (0%)
 Frame = +3

Query: 6   DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 185
           DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3   DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62

Query: 186 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 365
           RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63  RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122

Query: 366 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 545
           IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLA 182

Query: 546 GRDLTDYLMKILTERGYSFTTTAEEN--RERYQENLYIALD 662
           GRDLTDYLMKILTERGYSFTTTAE    R+  ++  Y+ALD
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALD 223
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,611,668
Number of Sequences: 369166
Number of extensions: 1754361
Number of successful extensions: 6159
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6064
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6073541875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)