Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_022_H06
(832 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 393 e-109
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 391 e-108
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 391 e-108
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 391 e-108
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 391 e-108
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 387 e-107
sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A 386 e-107
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 384 e-106
sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70) 384 e-106
sp|P11503|HSP70_ONCVO Heat shock 70 kDa protein (HSP70) 382 e-106
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 393 bits (1009), Expect = e-109
Identities = 209/271 (77%), Positives = 220/271 (81%), Gaps = 1/271 (0%)
Frame = +1
Query: 1 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IH
Sbjct: 273 TLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIH 332
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
DIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKD 452
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSK 720
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSK 512
Query: 721 DDIERMVAEAEKYKKR*D-QKDRIAARIPLK 810
+DIERMV EAEKYK + Q+D+++++ LK
Sbjct: 513 EDIERMVQEAEKYKAEDEKQRDKVSSKNSLK 543
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 391 bits (1005), Expect = e-108
Identities = 208/271 (76%), Positives = 220/271 (81%), Gaps = 1/271 (0%)
Frame = +1
Query: 1 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IH
Sbjct: 273 TLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIH 332
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
DIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKD 452
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSK 720
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSK 512
Query: 721 DDIERMVAEAEKYKKR*D-QKDRIAARIPLK 810
+DIERMV EAEKYK + Q+D+++++ L+
Sbjct: 513 EDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 543
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 391 bits (1005), Expect = e-108
Identities = 208/271 (76%), Positives = 220/271 (81%), Gaps = 1/271 (0%)
Frame = +1
Query: 1 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IH
Sbjct: 273 TLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIH 332
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
DIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKD 452
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSK 720
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSK 512
Query: 721 DDIERMVAEAEKYKKR*D-QKDRIAARIPLK 810
+DIERMV EAEKYK + Q+D+++++ L+
Sbjct: 513 EDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 543
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 391 bits (1005), Expect = e-108
Identities = 208/271 (76%), Positives = 220/271 (81%), Gaps = 1/271 (0%)
Frame = +1
Query: 1 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAKLDK IH
Sbjct: 273 TLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIH 332
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
DIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKD 452
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSK 720
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSK 512
Query: 721 DDIERMVAEAEKYKKR*D-QKDRIAARIPLK 810
+DIERMV EAEKYK + Q+D+++++ L+
Sbjct: 513 EDIERMVQEAEKYKAEDEKQRDKVSSKNSLE 543
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 391 bits (1005), Expect = e-108
Identities = 207/267 (77%), Positives = 218/267 (81%), Gaps = 1/267 (0%)
Frame = +1
Query: 1 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEKALRDAK+DK IH
Sbjct: 273 TLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKMDKAQIH 332
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
DIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKIQKLLQDYFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKD 452
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSK 720
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGI+NVSAV+K TGKENKITITNDKGRLSK
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKENKITITNDKGRLSK 512
Query: 721 DDIERMVAEAEKYKKR*D-QKDRIAAR 798
+DIERMV EAEKYK D Q+D+++A+
Sbjct: 513 EDIERMVQEAEKYKAEDDVQRDKVSAK 539
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 387 bits (994), Expect = e-107
Identities = 204/271 (75%), Positives = 219/271 (80%), Gaps = 1/271 (0%)
Frame = +1
Query: 1 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADLFR TL+PVEK+LRDAK+DK +H
Sbjct: 273 TLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADLFRGTLDPVEKSLRDAKMDKAQVH 332
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
DIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE ILSGDKSE VQD
Sbjct: 333 DIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLL 392
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
GIETAGGVMT LIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 393 LLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKD 452
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSK 720
NNLLGKFEL GIPPAPRGVPQIEVTFDIDANGI+NVSA +K TGKENKITITNDKGRLSK
Sbjct: 453 NNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAADKSTGKENKITITNDKGRLSK 512
Query: 721 DDIERMVAEAEKYKKR*D-QKDRIAARIPLK 810
+DIERMV EAEKYK D Q+D+++++ L+
Sbjct: 513 EDIERMVQEAEKYKCEDDVQRDKVSSKNSLE 543
>sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A
Length = 640
Score = 386 bits (992), Expect = e-107
Identities = 204/267 (76%), Positives = 220/267 (82%), Gaps = 1/267 (0%)
Frame = +1
Query: 1 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSSS+QA+IEIDSL+EGIDFYT+ITRARFEEL ADLFRST++PVEK+LRDAK+DK +H
Sbjct: 274 TLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKSLRDAKMDKSQVH 333
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
DIVLVGGSTRIPK+QKLL DLF+GKELNKSINPDE ILSGDKSEAVQD
Sbjct: 334 DIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLL 393
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
GIETAGGVMTALIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 394 LLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKD 453
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSK 720
NNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K TGK+NKITITNDKGRLSK
Sbjct: 454 NNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSATDKSTGKQNKITITNDKGRLSK 513
Query: 721 DDIERMVAEAEKYKKR*D-QKDRIAAR 798
DDIERMV EAEKYK + QKDRI A+
Sbjct: 514 DDIERMVNEAEKYKADDEAQKDRIGAK 540
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 384 bits (987), Expect = e-106
Identities = 204/271 (75%), Positives = 222/271 (81%), Gaps = 1/271 (0%)
Frame = +1
Query: 1 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSSS+QA+IEIDSL+EGIDFYT+ITRARFEEL ADLFRST++PVEKALRDAK+DK +H
Sbjct: 272 TLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKALRDAKMDKAQVH 331
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
DIVLVGGSTRIPK+QKLL D F+GKELNKSINPDE ILSGDKSEAVQD
Sbjct: 332 DIVLVGGSTRIPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLL 391
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
GIETAGGVMTALIKRN YSDNQPGVLIQVYEGERA+TKD
Sbjct: 392 LLDVAPLSLGIETAGGVMTALIKRNTTIPTKTSETFTTYSDNQPGVLIQVYEGERALTKD 451
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSK 720
NNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K TGK+NKITITNDKGRLSK
Sbjct: 452 NNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAQDKSTGKQNKITITNDKGRLSK 511
Query: 721 DDIERMVAEAEKYKKR*D-QKDRIAARIPLK 810
D+IERMV EAEKYK + QKDRIAA+ L+
Sbjct: 512 DEIERMVQEAEKYKADDEAQKDRIAAKNALE 542
>sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70)
Length = 644
Score = 384 bits (987), Expect = e-106
Identities = 202/271 (74%), Positives = 222/271 (81%), Gaps = 1/271 (0%)
Frame = +1
Query: 1 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSSS+QA+IEIDSL+EGIDFYTSITRARFEE+ +DLFR TLEPVEKALRDAK+DK IH
Sbjct: 275 TLSSSSQASIEIDSLFEGIDFYTSITRARFEEMCSDLFRGTLEPVEKALRDAKMDKAQIH 334
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
D+VLVGGSTRIPK+QKLLQD FNG+ELNKSINPDE ILSGDKSE VQD
Sbjct: 335 DVVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAYGAAIQAAILSGDKSENVQDLL 394
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
GIETAGGVMTALIKRN YSDNQPGV+IQVYEGERAMTKD
Sbjct: 395 LLDVAPLSLGIETAGGVMTALIKRNTTIPSKQTQTFTTYSDNQPGVMIQVYEGERAMTKD 454
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSK 720
NNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGRLSK
Sbjct: 455 NNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSK 514
Query: 721 DDIERMVAEAEKYKKR*D-QKDRIAARIPLK 810
+DIERMV +A+KYK D Q+++IAA+ L+
Sbjct: 515 EDIERMVQDADKYKAEDDAQREKIAAKNSLE 545
>sp|P11503|HSP70_ONCVO Heat shock 70 kDa protein (HSP70)
Length = 322
Score = 382 bits (981), Expect = e-106
Identities = 204/271 (75%), Positives = 221/271 (81%), Gaps = 1/271 (0%)
Frame = +1
Query: 1 TLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFRSTLEPVEKALRDAKLDKHTIH 180
TLSSS+QA+IEIDSL+EGIDFYT+ITRARFEEL ADLFRST++PVEKALR AK+DK +H
Sbjct: 30 TLSSSSQASIEIDSLFEGIDFYTNITRARFEELCADLFRSTMDPVEKALRVAKMDKAQVH 89
Query: 181 DIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXXXXXXXXXILSGDKSEAVQDXX 360
DIVLVGGSTRIPK+QKLL D F+GKELNKSINPDE ILSGDKSEAVQD
Sbjct: 90 DIVLVGGSTRIPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQDLL 149
Query: 361 XXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXYSDNQPGVLIQVYEGERAMTKD 540
GIETAGGVMTALIKRN YSDNQPGVLIQVYEGERAMTKD
Sbjct: 150 LLDVAPLSLGIETAGGVMTALIKRNTTIPTKTSQTFTTYSDNQPGVLIQVYEGERAMTKD 209
Query: 541 NNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGRLSK 720
NNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K TGK+NKITITNDKGRLSK
Sbjct: 210 NNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAQDKSTGKQNKITITNDKGRLSK 269
Query: 721 DDIERMVAEAEKYKKR*D-QKDRIAARIPLK 810
D+IERMV EAEKYK + QKDRIAA+ L+
Sbjct: 270 DEIERMVQEAEKYKADDEAQKDRIAAKNALE 300
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,811,308
Number of Sequences: 369166
Number of extensions: 1333292
Number of successful extensions: 4924
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4305
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8052550455
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)