Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_022_G23
(391 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q04831|GLNA_PANAR Glutamine synthetase (Glutamate--ammon... 194 4e-50
sp|P09606|GLNA_RAT Glutamine synthetase (Glutamate--ammonia... 169 2e-42
sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammon... 167 7e-42
sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (... 166 2e-41
sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammon... 166 2e-41
sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammon... 165 3e-41
sp|P04773|GLNA_CRIGR Glutamine synthetase (Glutamate--ammon... 164 6e-41
sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammon... 162 2e-40
sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammon... 162 3e-40
sp|P46410|GLNA_PIG Glutamine synthetase (Glutamate--ammonia... 161 5e-40
>sp|Q04831|GLNA_PANAR Glutamine synthetase (Glutamate--ammonia ligase)
Length = 361
Score = 194 bits (494), Expect = 4e-50
Identities = 87/128 (67%), Positives = 102/128 (79%)
Frame = +2
Query: 2 YLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTGQGEGSNS 181
YL L PD++ Q MYIW+DGTGENLRSKTRTLNF P P ++PIWNFDGSSTGQ E SNS
Sbjct: 13 YLRLDIPDQKCQAMYIWVDGTGENLRSKTRTLNFTPKSPSELPIWNFDGSSTGQAERSNS 72
Query: 182 DIYLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQ 361
D+YL+PVA++ DPFR +NK+VLCETY Y++ P D+N R C E M A D HPWFG+EQ
Sbjct: 73 DVYLYPVAVYRDPFRLGNNKLVLCETYKYNKKPADTNQRWKCMEVMTRAADQHPWFGMEQ 132
Query: 362 EYTLLDID 385
EYTLLDID
Sbjct: 133 EYTLLDID 140
>sp|P09606|GLNA_RAT Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 169 bits (428), Expect = 2e-42
Identities = 76/128 (59%), Positives = 96/128 (75%)
Frame = +2
Query: 2 YLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTGQGEGSNS 181
Y+NLP E++Q+MYIW+DGTGE LR KTRTL+ P +++P WNFDGSST Q EGSNS
Sbjct: 17 YMNLPQ-GEKIQLMYIWVDGTGEGLRCKTRTLDCDPKCVEELPEWNFDGSSTFQSEGSNS 75
Query: 182 DIYLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQ 361
D+YLHPVA+F DPFR NK+V CE + Y++ P ++NLRHSC+ M HPWFG+EQ
Sbjct: 76 DMYLHPVAMFRDPFRRDPNKLVFCEVFKYNRKPAETNLRHSCKRIMDMVSSQHPWFGMEQ 135
Query: 362 EYTLLDID 385
EYTL+ D
Sbjct: 136 EYTLMGTD 143
>sp|P15105|GLNA_MOUSE Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 167 bits (423), Expect = 7e-42
Identities = 76/128 (59%), Positives = 96/128 (75%)
Frame = +2
Query: 2 YLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTGQGEGSNS 181
Y++LP E+VQ MYIW+DGTGE LR KTRTL+ P +++P WNFDGSST Q EGSNS
Sbjct: 17 YMSLPQ-GEKVQAMYIWVDGTGEGLRCKTRTLDCEPKCVEELPEWNFDGSSTFQSEGSNS 75
Query: 182 DIYLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQ 361
D+YLHPVA+F DPFR NK+VLCE + Y++ P ++NLRH C+ M + HPWFG+EQ
Sbjct: 76 DMYLHPVAMFRDPFRRDPNKLVLCEVFKYNRKPAETNLRHICKRIMDMVSNQHPWFGMEQ 135
Query: 362 EYTLLDID 385
EYTL+ D
Sbjct: 136 EYTLMGTD 143
>sp|P20478|GLNA2_DROME Glutamine synthetase 2, cytoplasmic (Glutamate--ammonia ligase 2)
Length = 369
Score = 166 bits (420), Expect = 2e-41
Identities = 73/128 (57%), Positives = 93/128 (72%)
Frame = +2
Query: 2 YLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTGQGEGSNS 181
YL+LP + VQ Y+WIDGTGE+LR K RTL+F+P PK++P+WN+DGSS Q EGSNS
Sbjct: 22 YLSLPLQENIVQATYVWIDGTGEDLRCKDRTLDFIPQSPKELPVWNYDGSSCYQAEGSNS 81
Query: 182 DIYLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQ 361
D YL+PVA++ DPFR +N +V+C+TY +D TP D+N R +C E PWFGIEQ
Sbjct: 82 DTYLYPVAIYKDPFRRGNNILVMCDTYKFDGTPTDTNKRKTCLEVANKCAAEEPWFGIEQ 141
Query: 362 EYTLLDID 385
EYT LD D
Sbjct: 142 EYTFLDFD 149
>sp|P16580|GLNA_CHICK Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 166 bits (419), Expect = 2e-41
Identities = 77/128 (60%), Positives = 93/128 (72%)
Frame = +2
Query: 2 YLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTGQGEGSNS 181
Y+ LP E+VQ MYIWIDGTGE+LR KTRTL+ P +D+P WNFDGSST Q EGSNS
Sbjct: 17 YMKLPQ-GEKVQAMYIWIDGTGEHLRCKTRTLDHEPKSLEDLPEWNFDGSSTFQAEGSNS 75
Query: 182 DIYLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQ 361
D+YL P A+F DPFR NK+VLCE + Y++ D+NLRH+C M + HPWFG+EQ
Sbjct: 76 DMYLRPAAMFRDPFRKDPNKLVLCEVFKYNRQSADTNLRHTCRRIMDMVSNQHPWFGMEQ 135
Query: 362 EYTLLDID 385
EYTLL D
Sbjct: 136 EYTLLGTD 143
>sp|Q9QY94|GLNA_ACOCA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 165 bits (418), Expect = 3e-41
Identities = 75/128 (58%), Positives = 96/128 (75%)
Frame = +2
Query: 2 YLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTGQGEGSNS 181
Y++LP E+VQ MYIW+DGTGE LR KTRTL+ P +++P WNFDGSST Q EGSNS
Sbjct: 17 YMSLPQ-GEKVQAMYIWVDGTGEGLRCKTRTLDCEPKCVEELPEWNFDGSSTFQSEGSNS 75
Query: 182 DIYLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQ 361
D+YL PVA+F DPFR + NK+V CE + Y++ P ++NLRHSC+ M + HPWFG+EQ
Sbjct: 76 DMYLSPVAMFRDPFRKEPNKLVFCEVFKYNRKPAETNLRHSCKRIMDMVSNQHPWFGMEQ 135
Query: 362 EYTLLDID 385
EYTL+ D
Sbjct: 136 EYTLMGTD 143
>sp|P04773|GLNA_CRIGR Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 164 bits (415), Expect = 6e-41
Identities = 75/128 (58%), Positives = 95/128 (74%)
Frame = +2
Query: 2 YLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTGQGEGSNS 181
Y++LP E+VQ MYIW+DGTGE LR KTRTL+ P +++P WNFDGSST Q E SNS
Sbjct: 17 YMSLPQ-GEKVQAMYIWVDGTGEGLRCKTRTLDCEPKCVEELPEWNFDGSSTFQSESSNS 75
Query: 182 DIYLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQ 361
D+YL PVA+F DPFR + NK+V CE + Y+Q P ++NLRH+C+ M + HPWFG+EQ
Sbjct: 76 DMYLSPVAMFRDPFRKEPNKLVFCEVFKYNQKPAETNLRHTCKRIMDMVSNQHPWFGMEQ 135
Query: 362 EYTLLDID 385
EYTLL D
Sbjct: 136 EYTLLGTD 143
>sp|P15104|GLNA_HUMAN Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 162 bits (411), Expect = 2e-40
Identities = 75/128 (58%), Positives = 95/128 (74%)
Frame = +2
Query: 2 YLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTGQGEGSNS 181
Y++LP E+VQ MYIWIDGTGE LR KTRTL+ P +++P WNFDGSST Q EGSNS
Sbjct: 17 YMSLPQ-GEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCVEELPEWNFDGSSTLQSEGSNS 75
Query: 182 DIYLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQ 361
D+YL P A+F DPFR NK+VLCE + Y++ P ++NLRH+C+ M + HPWFG+EQ
Sbjct: 76 DMYLVPAAMFRDPFRKDPNKLVLCEVFKYNRRPAETNLRHTCKRIMDMVSNQHPWFGMEQ 135
Query: 362 EYTLLDID 385
EYTL+ D
Sbjct: 136 EYTLMGTD 143
>sp|Q8HZM5|GLNA_CANFA Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 162 bits (409), Expect = 3e-40
Identities = 74/128 (57%), Positives = 94/128 (73%)
Frame = +2
Query: 2 YLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTGQGEGSNS 181
Y++LP E+VQ MYIWIDGTGE LR KTRTL+ P +++P WNFDGSST Q EGSNS
Sbjct: 17 YMSLPQ-GEKVQAMYIWIDGTGEGLRCKTRTLDSEPKGVEELPEWNFDGSSTFQSEGSNS 75
Query: 182 DIYLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQ 361
D+YL P A+F DPFR NK+V CE + Y++ P ++NLRH+C+ M + HPWFG+EQ
Sbjct: 76 DMYLVPAAMFRDPFRKDPNKLVFCEVFKYNRKPAETNLRHTCKRIMDMVSNQHPWFGMEQ 135
Query: 362 EYTLLDID 385
EYTL+ D
Sbjct: 136 EYTLMGTD 143
>sp|P46410|GLNA_PIG Glutamine synthetase (Glutamate--ammonia ligase) (GS)
Length = 373
Score = 161 bits (407), Expect = 5e-40
Identities = 74/128 (57%), Positives = 94/128 (73%)
Frame = +2
Query: 2 YLNLPTPDEQVQVMYIWIDGTGENLRSKTRTLNFVPVKPKDVPIWNFDGSSTGQGEGSNS 181
Y++LP E+VQ MYIWIDGTGE LR KTRTL+ P +++P WNFDGSST Q EGSNS
Sbjct: 17 YMSLPQ-GEKVQAMYIWIDGTGEGLRCKTRTLDSEPKCIEELPEWNFDGSSTFQSEGSNS 75
Query: 182 DIYLHPVALFNDPFRGKDNKMVLCETYTYDQTPHDSNLRHSCEEAMKAAEDYHPWFGIEQ 361
D+YL P A+F DPFR NK+V CE + Y++ P ++NLRH+C+ M + HPWFG+EQ
Sbjct: 76 DMYLVPAAMFRDPFRKDPNKLVFCEVFKYNRKPAETNLRHTCKRIMDMVSNQHPWFGMEQ 135
Query: 362 EYTLLDID 385
EYTL+ D
Sbjct: 136 EYTLMGTD 143
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,743,806
Number of Sequences: 369166
Number of extensions: 834121
Number of successful extensions: 2263
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2205
length of database: 68,354,980
effective HSP length: 96
effective length of database: 50,620,420
effective search space used: 1670473860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)