Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_022_G19
(605 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q5E9A1|NACA_BOVIN Nascent polypeptide-associated complex... 119 5e-27
sp|Q13765|NACA_HUMAN Nascent polypeptide-associated complex... 119 5e-27
sp|Q60817|NACA_MOUSE Nascent polypeptide-associated complex... 119 5e-27
sp|Q68F90|NACA_XENTR Nascent polypeptide-associated complex... 119 5e-27
sp|P70670|NACAM_MOUSE Nascent polypeptide-associated comple... 119 5e-27
sp|Q6QN10|NACA_CHILA Nascent polypeptide-associated complex... 119 6e-27
sp|Q8AWF2|NACA_ORENI Nascent polypeptide-associated complex... 119 6e-27
sp|Q8JIU7|NACA_BRARE Nascent polypeptide-associated complex... 117 2e-26
sp|Q6IP73|NACA_XENLA Nascent polypeptide-associated complex... 117 2e-26
sp|Q5R9I9|NACA_PONPY Nascent polypeptide-associated complex... 117 3e-26
>sp|Q5E9A1|NACA_BOVIN Nascent polypeptide-associated complex alpha subunit (NAC-alpha)
(Alpha-NAC)
Length = 215
Score = 119 bits (299), Expect = 5e-27
Identities = 73/150 (48%), Positives = 93/150 (62%), Gaps = 4/150 (2%)
Frame = +1
Query: 100 DDPLSKSKQSRSEKKARKAMSKLGLKHVTGVNRVAIRKSKNILFVVGQPEVFKSPASDTY 279
++P+SK+KQSRSEKKARKAMSKLGL+ VTGV RV IRKSKNILFV+ +P+V+KSPASDTY
Sbjct: 61 EEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTY 120
Query: 280 VVFGEAKIEDXXXXXXXXXXXXXXXXXXXXXTDNXXXXXXXXXXXXETIQEESDGEEEDA 459
+VFGEAKIED T+QEES+ EE D
Sbjct: 121 IVFGEAKIED-------LSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDE 173
Query: 460 TGL----CEMILNL**SSPS**NKAIRALR 537
TG+ E++++ S + KA+RAL+
Sbjct: 174 TGVEVKDIELVMSQANVSRA---KAVRALK 200
>sp|Q13765|NACA_HUMAN Nascent polypeptide-associated complex alpha subunit (NAC-alpha)
(Alpha-NAC) (Hom s 2.02)
Length = 215
Score = 119 bits (299), Expect = 5e-27
Identities = 73/150 (48%), Positives = 93/150 (62%), Gaps = 4/150 (2%)
Frame = +1
Query: 100 DDPLSKSKQSRSEKKARKAMSKLGLKHVTGVNRVAIRKSKNILFVVGQPEVFKSPASDTY 279
++P+SK+KQSRSEKKARKAMSKLGL+ VTGV RV IRKSKNILFV+ +P+V+KSPASDTY
Sbjct: 61 EEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTY 120
Query: 280 VVFGEAKIEDXXXXXXXXXXXXXXXXXXXXXTDNXXXXXXXXXXXXETIQEESDGEEEDA 459
+VFGEAKIED T+QEES+ EE D
Sbjct: 121 IVFGEAKIED-------LSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDE 173
Query: 460 TGL----CEMILNL**SSPS**NKAIRALR 537
TG+ E++++ S + KA+RAL+
Sbjct: 174 TGVEVKDIELVMSQANVSRA---KAVRALK 200
>sp|Q60817|NACA_MOUSE Nascent polypeptide-associated complex alpha subunit (Alpha-NAC)
(Alpha-NAC/1.9.2)
Length = 215
Score = 119 bits (299), Expect = 5e-27
Identities = 73/150 (48%), Positives = 93/150 (62%), Gaps = 4/150 (2%)
Frame = +1
Query: 100 DDPLSKSKQSRSEKKARKAMSKLGLKHVTGVNRVAIRKSKNILFVVGQPEVFKSPASDTY 279
++P+SK+KQSRSEKKARKAMSKLGL+ VTGV RV IRKSKNILFV+ +P+V+KSPASDTY
Sbjct: 61 EEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTY 120
Query: 280 VVFGEAKIEDXXXXXXXXXXXXXXXXXXXXXTDNXXXXXXXXXXXXETIQEESDGEEEDA 459
+VFGEAKIED T+QEES+ EE D
Sbjct: 121 IVFGEAKIED-------LSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDE 173
Query: 460 TGL----CEMILNL**SSPS**NKAIRALR 537
TG+ E++++ S + KA+RAL+
Sbjct: 174 TGVEVKDIELVMSQANVSRA---KAVRALK 200
>sp|Q68F90|NACA_XENTR Nascent polypeptide-associated complex alpha subunit (NAC-alpha)
(Alpha-NAC)
Length = 214
Score = 119 bits (299), Expect = 5e-27
Identities = 73/150 (48%), Positives = 93/150 (62%), Gaps = 4/150 (2%)
Frame = +1
Query: 100 DDPLSKSKQSRSEKKARKAMSKLGLKHVTGVNRVAIRKSKNILFVVGQPEVFKSPASDTY 279
++P+SK+KQSRSEKKARKAMSKLGL+ VTGV RV IRKSKNILFV+ +P+V+KSPASDTY
Sbjct: 60 EEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTY 119
Query: 280 VVFGEAKIEDXXXXXXXXXXXXXXXXXXXXXTDNXXXXXXXXXXXXETIQEESDGEEEDA 459
+VFGEAKIED T+QEES+ EE D
Sbjct: 120 IVFGEAKIED-------LSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDE 172
Query: 460 TGL----CEMILNL**SSPS**NKAIRALR 537
TG+ E++++ S + KA+RAL+
Sbjct: 173 TGVEVKDIELVMSQANVSRA---KAVRALK 199
>sp|P70670|NACAM_MOUSE Nascent polypeptide-associated complex alpha subunit, muscle-specific
form (Alpha-NAC, muscle-specific form)
Length = 2187
Score = 119 bits (299), Expect = 5e-27
Identities = 73/150 (48%), Positives = 93/150 (62%), Gaps = 4/150 (2%)
Frame = +1
Query: 100 DDPLSKSKQSRSEKKARKAMSKLGLKHVTGVNRVAIRKSKNILFVVGQPEVFKSPASDTY 279
++P+SK+KQSRSEKKARKAMSKLGL+ VTGV RV IRKSKNILFV+ +P+V+KSPASDTY
Sbjct: 2033 EEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTY 2092
Query: 280 VVFGEAKIEDXXXXXXXXXXXXXXXXXXXXXTDNXXXXXXXXXXXXETIQEESDGEEEDA 459
+VFGEAKIED T+QEES+ EE D
Sbjct: 2093 IVFGEAKIED-------LSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDE 2145
Query: 460 TGL----CEMILNL**SSPS**NKAIRALR 537
TG+ E++++ S + KA+RAL+
Sbjct: 2146 TGVEVKDIELVMSQANVSRA---KAVRALK 2172
>sp|Q6QN10|NACA_CHILA Nascent polypeptide-associated complex alpha subunit (NAC-alpha)
(Alpha-NAC)
Length = 215
Score = 119 bits (298), Expect = 6e-27
Identities = 66/123 (53%), Positives = 79/123 (64%)
Frame = +1
Query: 100 DDPLSKSKQSRSEKKARKAMSKLGLKHVTGVNRVAIRKSKNILFVVGQPEVFKSPASDTY 279
++P+SK+KQSRSEKKARKAMSKLGL+ VTGV RV IRKSKNILFV+ +P+V+KSPASDTY
Sbjct: 61 EEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTY 120
Query: 280 VVFGEAKIEDXXXXXXXXXXXXXXXXXXXXXTDNXXXXXXXXXXXXETIQEESDGEEEDA 459
+VFGEAKIED T+QEES+ EE D
Sbjct: 121 IVFGEAKIED-------LSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDE 173
Query: 460 TGL 468
TG+
Sbjct: 174 TGV 176
>sp|Q8AWF2|NACA_ORENI Nascent polypeptide-associated complex alpha subunit (NAC-alpha)
(Alpha-NAC)
Length = 215
Score = 119 bits (298), Expect = 6e-27
Identities = 73/150 (48%), Positives = 93/150 (62%), Gaps = 4/150 (2%)
Frame = +1
Query: 100 DDPLSKSKQSRSEKKARKAMSKLGLKHVTGVNRVAIRKSKNILFVVGQPEVFKSPASDTY 279
++P+SK+KQSRSEKKARKAMSKLGL+ VTGV RV IRKSKNILFV+ +P+V+KSPASDTY
Sbjct: 61 EEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTY 120
Query: 280 VVFGEAKIEDXXXXXXXXXXXXXXXXXXXXXTDNXXXXXXXXXXXXETIQEESDGEEEDA 459
+VFGEAKIED T+QEES+ EE D
Sbjct: 121 IVFGEAKIED-------LSQQAQLAAAEKFKVPGETVSNVQENTQTPTVQEESEEEEVDE 173
Query: 460 TGL----CEMILNL**SSPS**NKAIRALR 537
TG+ E++++ S + KA+RAL+
Sbjct: 174 TGVEVKDIELVMSQANVSRA---KAVRALK 200
>sp|Q8JIU7|NACA_BRARE Nascent polypeptide-associated complex alpha subunit (NAC-alpha)
(Alpha-NAC)
Length = 215
Score = 117 bits (294), Expect = 2e-26
Identities = 72/150 (48%), Positives = 92/150 (61%), Gaps = 4/150 (2%)
Frame = +1
Query: 100 DDPLSKSKQSRSEKKARKAMSKLGLKHVTGVNRVAIRKSKNILFVVGQPEVFKSPASDTY 279
++P+SK+KQSRSEKKARKAMSKLGL+ V GV RV IRKSKNILFV+ +P+V+KSPASDTY
Sbjct: 61 EEPVSKAKQSRSEKKARKAMSKLGLRQVAGVTRVTIRKSKNILFVITKPDVYKSPASDTY 120
Query: 280 VVFGEAKIEDXXXXXXXXXXXXXXXXXXXXXTDNXXXXXXXXXXXXETIQEESDGEEEDA 459
+VFGEAKIED T+QEES+ EE D
Sbjct: 121 IVFGEAKIED-------LSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDE 173
Query: 460 TGL----CEMILNL**SSPS**NKAIRALR 537
TG+ E++++ S + KA+RAL+
Sbjct: 174 TGVEVKDIELVMSQANVSRA---KAVRALK 200
>sp|Q6IP73|NACA_XENLA Nascent polypeptide-associated complex alpha subunit (NAC-alpha)
(Alpha-NAC)
Length = 213
Score = 117 bits (294), Expect = 2e-26
Identities = 72/150 (48%), Positives = 92/150 (61%), Gaps = 4/150 (2%)
Frame = +1
Query: 100 DDPLSKSKQSRSEKKARKAMSKLGLKHVTGVNRVAIRKSKNILFVVGQPEVFKSPASDTY 279
++P+SK+KQSRSEKKARKAMSKLGL+ VTGV RV IRKSKNILFV+ +P+V+KSPASDTY
Sbjct: 59 EEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTY 118
Query: 280 VVFGEAKIEDXXXXXXXXXXXXXXXXXXXXXTDNXXXXXXXXXXXXETIQEESDGEEEDA 459
+VFGEAKIED T+QEES+ EE D
Sbjct: 119 IVFGEAKIED-------LSQQAQLAAAEKFKVQGETVSNIQENTQTPTVQEESEEEEVDE 171
Query: 460 TGL----CEMILNL**SSPS**NKAIRALR 537
G+ E++++ S + KA+RAL+
Sbjct: 172 AGVEVKDIELVMSQANVSRA---KAVRALK 198
>sp|Q5R9I9|NACA_PONPY Nascent polypeptide-associated complex alpha subunit (NAC-alpha)
(Alpha-NAC)
Length = 215
Score = 117 bits (292), Expect = 3e-26
Identities = 72/150 (48%), Positives = 92/150 (61%), Gaps = 4/150 (2%)
Frame = +1
Query: 100 DDPLSKSKQSRSEKKARKAMSKLGLKHVTGVNRVAIRKSKNILFVVGQPEVFKSPASDTY 279
++P+SK+KQSRSEKKARKAMSKLGL+ VTGV RV IRKSKNILFV+ +P+V+KSPASDTY
Sbjct: 61 EEPVSKAKQSRSEKKARKAMSKLGLRQVTGVTRVTIRKSKNILFVITKPDVYKSPASDTY 120
Query: 280 VVFGEAKIEDXXXXXXXXXXXXXXXXXXXXXTDNXXXXXXXXXXXXETIQEESDGEEEDA 459
+VFGEAKIED T+QEES+ EE D
Sbjct: 121 IVFGEAKIED-------LSQQAQLAAAEKFKVQGEAVSNIQENTQTPTVQEESEEEEVDE 173
Query: 460 TGL----CEMILNL**SSPS**NKAIRALR 537
T + E++++ S + KA+RAL+
Sbjct: 174 TDVEVKDIELVMSQANVSRA---KAVRALK 200
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,348,153
Number of Sequences: 369166
Number of extensions: 752854
Number of successful extensions: 1990
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1943
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1989
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4699949280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)