Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_022_G18
(582 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P51469|G3P_XENLA Glyceraldehyde-3-phosphate dehydrogenas... 225 5e-59
sp|P20287|G3P_SCHMA Glyceraldehyde-3-phosphate dehydrogenas... 224 1e-58
sp|O57479|G3P_COLLI Glyceraldehyde-3-phosphate dehydrogenas... 221 1e-57
sp|Q9N2D5|G3P_FELCA Glyceraldehyde-3-phosphate dehydrogenas... 220 2e-57
sp|Q05025|G3P_COTJA Glyceraldehyde-3-phosphate dehydrogenas... 220 2e-57
sp|Q28554|G3P_SHEEP Glyceraldehyde-3-phosphate dehydrogenas... 219 4e-57
sp|P00356|G3P_CHICK Glyceraldehyde-3-phosphate dehydrogenas... 218 9e-57
sp|P00355|G3P_PIG Glyceraldehyde-3-phosphate dehydrogenase ... 218 9e-57
sp|P46406|G3P_RABIT Glyceraldehyde-3-phosphate dehydrogenas... 217 2e-56
sp|P16858|G3P_MOUSE Glyceraldehyde-3-phosphate dehydrogenas... 217 2e-56
>sp|P51469|G3P_XENLA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 225 bits (574), Expect = 5e-59
Identities = 111/157 (70%), Positives = 127/157 (80%)
Frame = +3
Query: 3 HAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVP 182
HA+TATQKTVDGPS KLWRDGRGA QNIIP IPELNGKITGMAFRVP P
Sbjct: 177 HAFTATQKTVDGPSGKLWRDGRGAGQNIIPASTGAAKAVGKVIPELNGKITGMAFRVPTP 236
Query: 183 DVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAK 362
+VSVVDLTC+L+K AKYD+IKAAIK ASE MKGIL YT+++VVS DF GD +SSIFDA
Sbjct: 237 NVSVVDLTCRLQKPAKYDDIKAAIKTASEGPMKGILGYTQDQVVSTDFNGDTHSSIFDAD 296
Query: 363 AGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMSTKD 473
AGI L + FVKLV+WYDNE GYS RV+DL+ HM++K+
Sbjct: 297 AGIALNENFVKLVSWYDNECGYSNRVVDLVCHMASKE 333
>sp|P20287|G3P_SCHMA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (Major larval
surface antigen) (P-37)
Length = 338
Score = 224 bits (571), Expect = 1e-58
Identities = 109/158 (68%), Positives = 123/158 (77%)
Frame = +3
Query: 3 HAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVP 182
H++TATQK VDGPSSKLWRDGRGA QNIIP IP LNGK+TGMAFRVP P
Sbjct: 180 HSFTATQKVVDGPSSKLWRDGRGAMQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPTP 239
Query: 183 DVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAK 362
DVSVVDLTC+L K A Y+EIKAA+K A+ +KGIL YTE+EVVS DF G +SSIFDAK
Sbjct: 240 DVSVVDLTCRLGKGASYEEIKAAVKAAASGPLKGILEYTEDEVVSSDFVGSTSSSIFDAK 299
Query: 363 AGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMSTKDH 476
AGI L + FVKLV+WYDNE+GYSCRV+DLI HM DH
Sbjct: 300 AGISLNNNFVKLVSWYDNEFGYSCRVVDLITHMHKVDH 337
>sp|O57479|G3P_COLLI Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 221 bits (563), Expect = 1e-57
Identities = 108/157 (68%), Positives = 126/157 (80%)
Frame = +3
Query: 3 HAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVP 182
HA TATQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P
Sbjct: 177 HAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTP 236
Query: 183 DVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAK 362
+VSVVDLTC+L+K AKYD+IK +K A++ +KGILAYTE++VVS DF GD +SS FDA
Sbjct: 237 NVSVVDLTCRLEKPAKYDDIKRVVKAAADGPLKGILAYTEDQVVSCDFNGDSHSSTFDAG 296
Query: 363 AGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMSTKD 473
AGI L D FVKLV+WYDNEYGYS RV+DL+ HM++K+
Sbjct: 297 AGIALNDHFVKLVSWYDNEYGYSNRVVDLMVHMASKE 333
>sp|Q9N2D5|G3P_FELCA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 220 bits (561), Expect = 2e-57
Identities = 107/157 (68%), Positives = 125/157 (79%)
Frame = +3
Query: 3 HAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVP 182
HA TATQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P
Sbjct: 177 HAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTP 236
Query: 183 DVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAK 362
+VSVVDLTC+L+KAAKYD+IK +K ASE +KGIL YTE++VVS DF D +SS FDA
Sbjct: 237 NVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAG 296
Query: 363 AGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMSTKD 473
AGI L D FVKL++WYDNE+GYS RV+DL+ HM++K+
Sbjct: 297 AGIALNDHFVKLISWYDNEFGYSNRVVDLMAHMASKE 333
>sp|Q05025|G3P_COTJA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 220 bits (560), Expect = 2e-57
Identities = 107/157 (68%), Positives = 125/157 (79%)
Frame = +3
Query: 3 HAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVP 182
HA TATQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P
Sbjct: 177 HAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTP 236
Query: 183 DVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAK 362
+VSVVDLTC+L+K AKYD+IK +K A+E +KGIL YTE++VVS DF GD +SS FDA
Sbjct: 237 NVSVVDLTCRLEKPAKYDDIKRVVKAAAEGPLKGILGYTEDQVVSCDFNGDSHSSTFDAG 296
Query: 363 AGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMSTKD 473
AGI L D FVKLV+WYDNE+GYS RV+DL+ HM++K+
Sbjct: 297 AGIALNDNFVKLVSWYDNEFGYSNRVVDLMVHMASKE 333
>sp|Q28554|G3P_SHEEP Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 322
Score = 219 bits (558), Expect = 4e-57
Identities = 107/157 (68%), Positives = 124/157 (78%)
Frame = +3
Query: 3 HAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVP 182
HA TATQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P
Sbjct: 166 HAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTP 225
Query: 183 DVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAK 362
+VSVVDLTC+L+K AKYDEIK +K ASE +KGIL YTE++VVS DF D +SS FDA
Sbjct: 226 NVSVVDLTCRLEKPAKYDEIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAG 285
Query: 363 AGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMSTKD 473
AGI L D FVKL++WYDNE+GYS RV+DL+ HM++K+
Sbjct: 286 AGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMASKE 322
>sp|P00356|G3P_CHICK Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 218 bits (555), Expect = 9e-57
Identities = 106/157 (67%), Positives = 125/157 (79%)
Frame = +3
Query: 3 HAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVP 182
HA TATQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P
Sbjct: 177 HAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTP 236
Query: 183 DVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAK 362
+VSVVDLTC+L+K AKYD+IK +K A++ +KGIL YTE++VVS DF GD +SS FDA
Sbjct: 237 NVSVVDLTCRLEKPAKYDDIKRVVKAAADGPLKGILGYTEDQVVSCDFNGDSHSSTFDAG 296
Query: 363 AGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMSTKD 473
AGI L D FVKLV+WYDNE+GYS RV+DL+ HM++K+
Sbjct: 297 AGIALNDHFVKLVSWYDNEFGYSNRVVDLMVHMASKE 333
>sp|P00355|G3P_PIG Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 218 bits (555), Expect = 9e-57
Identities = 106/157 (67%), Positives = 124/157 (78%)
Frame = +3
Query: 3 HAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVP 182
HA TATQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P
Sbjct: 177 HAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTP 236
Query: 183 DVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAK 362
+VSVVDLTC+L+K AKYD+IK +K ASE +KGIL YTE++VVS DF D +SS FDA
Sbjct: 237 NVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSDTHSSTFDAG 296
Query: 363 AGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMSTKD 473
AGI L D FVKL++WYDNE+GYS RV+DL+ HM++K+
Sbjct: 297 AGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMASKE 333
>sp|P46406|G3P_RABIT Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 217 bits (552), Expect = 2e-56
Identities = 106/157 (67%), Positives = 124/157 (78%)
Frame = +3
Query: 3 HAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVP 182
HA TATQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P
Sbjct: 177 HAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTP 236
Query: 183 DVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAK 362
+VSVVDLTC+L+KAAKYD+IK +K ASE +KGIL YTE++VVS DF +SS FDA
Sbjct: 237 NVSVVDLTCRLEKAAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSATHSSTFDAG 296
Query: 363 AGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMSTKD 473
AGI L D FVKL++WYDNE+GYS RV+DL+ HM++K+
Sbjct: 297 AGIALNDHFVKLISWYDNEFGYSNRVVDLMVHMASKE 333
>sp|P16858|G3P_MOUSE Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 217 bits (552), Expect = 2e-56
Identities = 105/157 (66%), Positives = 124/157 (78%)
Frame = +3
Query: 3 HAYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVP 182
HA TATQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P
Sbjct: 177 HAITATQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTP 236
Query: 183 DVSVVDLTCKLKKAAKYDEIKAAIKHASETTMKGILAYTEEEVVSQDFKGDHNSSIFDAK 362
+VSVVDLTC+L+K AKYD+IK +K ASE +KGIL YTE++VVS DF + +SS FDA
Sbjct: 237 NVSVVDLTCRLEKPAKYDDIKKVVKQASEGPLKGILGYTEDQVVSCDFNSNSHSSTFDAG 296
Query: 363 AGIQLTDTFVKLVAWYDNEYGYSCRVIDLIQHMSTKD 473
AGI L D FVKL++WYDNEYGYS RV+DL+ +M++K+
Sbjct: 297 AGIALNDNFVKLISWYDNEYGYSNRVVDLMAYMASKE 333
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,201,667
Number of Sequences: 369166
Number of extensions: 1136247
Number of successful extensions: 3108
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3015
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4308286840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)