Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_022_G04
(488 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q63627|SFR15_RAT Splicing factor, arginine/serine-rich 1... 68 1e-11
sp|P35085|CBPA_DICDI Calcium-binding protein 65 1e-10
sp|Q25434|FP1_MYTCO Adhesive plaque matrix protein precurso... 62 9e-10
sp|Q9M291|SC24C_ARATH Protein transport protein Sec24-like CEF 59 5e-09
sp|P38486|LEG3_CANFA Galectin-3 (Galactose-specific lectin ... 59 6e-09
sp|Q9Y6V0|PCLO_HUMAN Piccolo protein (Aczonin) 59 6e-09
sp|Q8R4X3|RBM12_MOUSE RNA-binding protein 12 (RNA-binding m... 59 8e-09
sp|P20073|ANXA7_HUMAN Annexin A7 (Annexin VII) (Synexin) 57 3e-08
sp|P97384|ANX11_MOUSE Annexin A11 (Annexin XI) (Calcyclin-a... 56 5e-08
sp|Q15427|SF3B4_HUMAN Splicing factor 3B subunit 4 (Spliceo... 55 9e-08
>sp|Q63627|SFR15_RAT Splicing factor, arginine/serine-rich 15 (CTD-binding SR-like
protein RA4)
Length = 1048
Score = 68.2 bits (165), Expect = 1e-11
Identities = 45/116 (38%), Positives = 51/116 (43%)
Frame = +1
Query: 19 PGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGA 198
P +P QPGM P QPGM P QPG+ P QPGM P QPGM P
Sbjct: 220 PPMP-QPGMPQPGMPQPGMPQPGLSQPGLPQPGMPQPGMPQPGMPQPGMPQP-------- 270
Query: 199 YSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGVPPGSYPH 366
QPG+ QPGM P P GM P T P P+ + P P + PH
Sbjct: 271 -GLAQPGLAQPGMPQPGMPQPGMPQPGMPQPGMPPTPPVQPT--FQPTFQPQNEPH 323
Score = 41.6 bits (96), Expect = 0.001
Identities = 48/145 (33%), Positives = 55/145 (37%), Gaps = 24/145 (16%)
Frame = +1
Query: 1 PHGGYAPGVPHQPGMVYPPAGQPG---MVYPPA----GQPGMIYPPAIQPGMVCPPAGQP 159
P G+ PGVP P PP PG M PP G P I PP P PP P
Sbjct: 621 PPPGFGPGVPPPPPPP-PPFWGPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIP 679
Query: 160 GMVYPSSGTHGGAY---------SAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYP 312
+V SG G A SAG P S P+ P + P + G G +
Sbjct: 680 NLV---SGARGNAESADSAKMYGSAGPPAAPTSLPTPP-VTQPVSLLGTQGVAPGPVIGL 735
Query: 313 SGPSTGY---NPGV-----PPGSYP 363
PSTG PG+ PPG P
Sbjct: 736 QAPSTGLLGGRPGLIPLQRPPGMPP 760
Score = 35.4 bits (80), Expect = 0.072
Identities = 29/82 (35%), Positives = 32/82 (39%)
Frame = +1
Query: 28 PHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYSA 207
PHQPG A QP PP G P PP PG+ PP P P G
Sbjct: 598 PHQPGPPVVGALQPPAFTPPLGIP----PPGFGPGVPPPPPPPP----PFWG-------- 641
Query: 208 GQPGMNYSNPSQPGMVYPNAPP 273
PG N + PG + P PP
Sbjct: 642 --PGFNPMH-LPPGFLPPGPPP 660
Score = 32.0 bits (71), Expect = 0.79
Identities = 29/118 (24%), Positives = 34/118 (28%), Gaps = 25/118 (21%)
Frame = +1
Query: 85 PAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYSAGQPGMNYS----------- 231
PA + P PP Q YP G AY+ Q +
Sbjct: 136 PAAATPAVAPAVPASSATSPPPPQAPFGYPGDGMQQPAYTQHQNVDQFQPRMMALQQDSM 195
Query: 232 --------NPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGY------NPGVPPGSYP 363
N PG +APP PQ GM P P G PG+P P
Sbjct: 196 QHQVPLPPNGQMPGFGLLSAPPPFPPMPQPGMPQPGMPQPGMPQPGLSQPGLPQPGMP 253
>sp|P35085|CBPA_DICDI Calcium-binding protein
Length = 467
Score = 64.7 bits (156), Expect = 1e-10
Identities = 52/125 (41%), Positives = 56/125 (44%), Gaps = 6/125 (4%)
Frame = +1
Query: 7 GGYAPGVPHQPGMVYPPA--GQPGMVYPPAGQPGMIYPPAI--QPGMVCPPAGQPGMVYP 174
G Y P P QPG YPP G PG P GQPG YPP QPG P Q G P
Sbjct: 114 GQYPPQQPGQPG--YPPQQPGAPGQYPPQQGQPGQ-YPPQQPGQPGQY--PPQQQGQYPP 168
Query: 175 SSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGVPP- 351
GAY QPG + P Q G+ A G P G+ P G G PGVPP
Sbjct: 169 QQPGQPGAYPPQQPGQPGAYPPQQGVQNTLAKTGAPGQP--GVPPPQGAYPG-QPGVPPQ 225
Query: 352 -GSYP 363
G+YP
Sbjct: 226 QGAYP 230
Score = 63.9 bits (154), Expect = 2e-10
Identities = 50/138 (36%), Positives = 54/138 (39%), Gaps = 20/138 (14%)
Frame = +1
Query: 10 GYAPGVPHQPGMVYPPAGQPGMVYPP--AGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSG 183
GY P P PG P GQPG YPP GQPG YPP Q GQPG P
Sbjct: 125 GYPPQQPGAPGQYPPQQGQPGQ-YPPQQPGQPGQ-YPPQQQGQYPPQQPGQPGAYPPQQP 182
Query: 184 THGGAY--------------SAGQPGMNYSNPSQPGMVYPNAPPGGMTY----PQGGMTY 309
GAY + GQPG+ + PG P PP Y P G
Sbjct: 183 GQPGAYPPQQGVQNTLAKTGAPGQPGVPPPQGAYPGQ--PGVPPQQGAYPGQQPPMGAYP 240
Query: 310 PSGPSTGYNPGVPPGSYP 363
P G Y P PG+YP
Sbjct: 241 PQGQPGAYPPQGQPGAYP 258
Score = 57.0 bits (136), Expect = 2e-08
Identities = 54/155 (34%), Positives = 58/155 (37%), Gaps = 36/155 (23%)
Frame = +1
Query: 7 GGYAPGVPHQPGMVYPPA--GQPGMVYPPA-------------GQPGM-----IYP--PA 120
G Y P P QPG YPP GQPG YPP GQPG+ YP P
Sbjct: 164 GQYPPQQPGQPG-AYPPQQPGQPG-AYPPQQGVQNTLAKTGAPGQPGVPPPQGAYPGQPG 221
Query: 121 IQPGMVCPPAGQPGM-VYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQG 297
+ P P QP M YP G G GQPG P Q + YP P YP
Sbjct: 222 VPPQQGAYPGQQPPMGAYPPQGQPGAYPPQGQPGA--YPPQQQQVAYPGQQPPMGAYPPQ 279
Query: 298 GMTYPSGPST------------GYNPGVPP-GSYP 363
YP G PG PP G+YP
Sbjct: 280 QGAYPGQQGAYPGQQGAYPGQQGAYPGQPPMGAYP 314
Score = 53.9 bits (128), Expect = 2e-07
Identities = 50/137 (36%), Positives = 50/137 (36%), Gaps = 16/137 (11%)
Frame = +1
Query: 1 PHGGYAPGVPHQPGMVYPPA--GQPGMVYPPAGQPGMIYPPAIQPGMVCPPAG----QPG 162
P PG P PG YPP G PG PP YP QPG P QPG
Sbjct: 31 PGSQSTPGAPGAPGQ-YPPQQPGAPGSNLPP-------YPGTQQPGAPGAPGQYPPQQPG 82
Query: 163 MVYPSSGTHGGAYSAGQPGMNYSNPSQPGM--VYPNAPPGGMTYP--QGGMTYPSGPSTG 330
P G Y QPG P QPG YP PG YP Q G P G
Sbjct: 83 QYPPQQPGAPGQYPPQQPGQPGYPPQQPGQSGQYPPQQPGQPGYPPQQPGAPGQYPPQQG 142
Query: 331 ----YNPGVP--PGSYP 363
Y P P PG YP
Sbjct: 143 QPGQYPPQQPGQPGQYP 159
Score = 39.3 bits (90), Expect = 0.005
Identities = 47/142 (33%), Positives = 48/142 (33%), Gaps = 21/142 (14%)
Frame = +1
Query: 1 PHGGYAPGVPHQPGMVYPPAGQPGMVYPPA--GQPGMIYPPAIQPGMVCPPAGQPGMVYP 174
P G A P V G PG P G PG YPP QPG PG P
Sbjct: 9 PAGSAADFYSQMPVKVMGTPGAPGSQSTPGAPGAPGQ-YPPQ-QPGA-------PGSNLP 59
Query: 175 SSGTHGGAYSAGQPGM-NYSNPSQPGMV----------YPNAPPGGMTYP-----QGGMT 306
+ G G PG P QPG YP PG YP Q G
Sbjct: 60 P---YPGTQQPGAPGAPGQYPPQQPGQYPPQQPGAPGQYPPQQPGQPGYPPQQPGQSGQY 116
Query: 307 YPSGP-STGYNPGVP--PGSYP 363
P P GY P P PG YP
Sbjct: 117 PPQQPGQPGYPPQQPGAPGQYP 138
Score = 35.0 bits (79), Expect = 0.094
Identities = 41/121 (33%), Positives = 46/121 (38%), Gaps = 3/121 (2%)
Frame = +1
Query: 1 PHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSS 180
P G P Q + YP P YPP Q G YP GQ G YP
Sbjct: 250 PQGQPGAYPPQQQQVAYPGQQPPMGAYPP--QQG-AYP------------GQQG-AYPG- 292
Query: 181 GTHGGAYSAGQPGMNYSNPSQPGM-VYPNAPPGGMT-YPQGGMTYPSGPSTGYNP-GVPP 351
GAY PG + P QP M YP G++ Y Q Y +G G P GV P
Sbjct: 293 --QQGAY----PGQQGAYPGQPPMGAYPGQQQYGVSAYSQTTAAYQTGAYPGQTPMGVYP 346
Query: 352 G 354
G
Sbjct: 347 G 347
>sp|Q25434|FP1_MYTCO Adhesive plaque matrix protein precursor (Foot protein 1) (MCFP1)
Length = 872
Score = 61.6 bits (148), Expect = 9e-10
Identities = 38/112 (33%), Positives = 51/112 (45%), Gaps = 7/112 (6%)
Frame = +1
Query: 49 YPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYSAG-QPGMN 225
YPP +P + YPP +P YPP+ +P + PP +P YP + G+Y QP
Sbjct: 628 YPPTYKPKITYPPTYKPKPSYPPSYRPKITYPPTYKPKKSYPQAYKSKGSYPPSYQPKKT 687
Query: 226 YSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPS-----TGYNPGVPPG-SYP 363
Y +P YP ++YP T PS P+ T Y P P SYP
Sbjct: 688 YPPSYKPKKTYPPTYKPKISYPPTYKTKPSYPASYKRKTSYPPTYKPKISYP 739
Score = 58.9 bits (141), Expect = 6e-09
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Frame = +1
Query: 13 YAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHG 192
Y P H+ + YPP +P + YPP + YPP+ +P PP +P + YP +
Sbjct: 130 YPPSYKHK--ITYPPTYKPKITYPPTYKQKPSYPPSYKPKTTYPPTYKPKITYPPTYKRK 187
Query: 193 GAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGVPPG-SYP 363
+Y+ +P Y +P + YP TY + P P T Y P P SYP
Sbjct: 188 PSYTPYKPKATYPPTYKPKITYP------PTYKRKPSYTPYKPKTTYPPTYKPKISYP 239
Score = 56.6 bits (135), Expect = 3e-08
Identities = 39/120 (32%), Positives = 55/120 (45%), Gaps = 3/120 (2%)
Frame = +1
Query: 1 PHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSS 180
P Y+P ++P + YPP +P YPP+ +P YPP +P + PP +P Y SS
Sbjct: 374 PKKTYSP--TYKPKITYPPTYKPKPSYPPSYKPKTTYPPTYKPKISYPPTYKPKASYVSS 431
Query: 181 GTHGGAY-SAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGV--PP 351
Y +P ++Y +P YP +TYP PS P T Y P + PP
Sbjct: 432 YKSKKTYPPTYKPKISYPPTYKPKPSYPPTYKPKITYPPTYKPKPSYPPT-YKPKITYPP 490
Score = 53.9 bits (128), Expect = 2e-07
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Frame = +1
Query: 31 HQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYSAG 210
++P YPP+ +P YPP +P + YPP +P PP +P + YP + +Y
Sbjct: 542 YKPKPSYPPSYKPKTTYPPTYKPKIRYPPTYKPKASYPPTYKPKITYPPTYKPKPSY--- 598
Query: 211 QPGMNYSNPSQPGMV-----YPNAPPGGMTYP---QGGMTYPSGPSTGYNPGVPPGSYP 363
P PS P + YP A TYP + +TYP P+ P PP P
Sbjct: 599 -PTPYKQKPSYPPIYKSKSSYPTAYKSKKTYPPTYKPKITYP--PTYKPKPSYPPSYRP 654
Score = 53.5 bits (127), Expect = 3e-07
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Frame = +1
Query: 31 HQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYSAG 210
++P + YPP +P YPP +P + YPP +P PP +P + YP + +Y
Sbjct: 442 YKPKISYPPTYKPKPSYPPTYKPKITYPPTYKPKPSYPPTYKPKITYPPTYKRKPSY--- 498
Query: 211 QPGMNYSNPSQPGMV-----YPNAPPGGMTYP---QGGMTYPSGPSTGYNPGVPPGSYP 363
P PS P + YP + TYP + +TYP P+ P PP P
Sbjct: 499 -PTPYKQKPSYPPIYKSKSSYPTSYKSKKTYPPTYKPKITYP--PTYKPKPSYPPSYKP 554
Score = 52.8 bits (125), Expect = 4e-07
Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 8/119 (6%)
Frame = +1
Query: 31 HQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYSAG 210
++P + YPP +P YPP +P + YPP +P PP +P + YP + +Y
Sbjct: 262 YKPKISYPPTYKPKPSYPPTYKPKVTYPPTYKPKPSYPPTYKPKITYPPTYKPKPSY--- 318
Query: 211 QPGMNYSNPSQPGMV-----YPNAPPGGMTYP---QGGMTYPSGPSTGYNPGVPPGSYP 363
P PS P + YP + TYP + +TYP P+ P PP P
Sbjct: 319 -PTPYKQKPSYPPIYKSKSSYPTSYKSKKTYPPTYKPKITYP--PTYKPKPSYPPSYKP 374
Score = 50.4 bits (119), Expect = 2e-06
Identities = 35/113 (30%), Positives = 50/113 (44%), Gaps = 2/113 (1%)
Frame = +1
Query: 31 HQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAY-SA 207
++P + YPP +P YPP+ +P Y P +P + PP +P YP S Y
Sbjct: 352 YKPKITYPPTYKPKPSYPPSYKPKKTYSPTYKPKITYPPTYKPKPSYPPSYKPKTTYPPT 411
Query: 208 GQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGV-PPGSYP 363
+P ++Y +P Y ++ TYP TY P Y P P SYP
Sbjct: 412 YKPKISYPPTYKPKASYVSSYKSKKTYPP---TYK--PKISYPPTYKPKPSYP 459
Score = 50.1 bits (118), Expect = 3e-06
Identities = 37/132 (28%), Positives = 54/132 (40%), Gaps = 15/132 (11%)
Frame = +1
Query: 13 YAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQ---------PGMVCPPAGQPGM 165
Y P +P YPP+ +P YPP +P + YPP + P PP +P +
Sbjct: 150 YPPTYKQKPS--YPPSYKPKTTYPPTYKPKITYPPTYKRKPSYTPYKPKATYPPTYKPKI 207
Query: 166 VYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYP---QGGMTYPS--GPSTG 330
YP + +Y+ +P Y +P + YP+ +Y + TYP P
Sbjct: 208 TYPPTYKRKPSYTPYKPKTTYPPTYKPKISYPSIYKPKASYVSSYKSKKTYPPTYKPKIS 267
Query: 331 YNPGV-PPGSYP 363
Y P P SYP
Sbjct: 268 YPPTYKPKPSYP 279
Score = 50.1 bits (118), Expect = 3e-06
Identities = 23/59 (38%), Positives = 34/59 (57%)
Frame = +1
Query: 1 PHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPS 177
P YA ++P + YPP +P + YPP +P + YPP +P + PPA +P + YPS
Sbjct: 814 PKPSYASS--YKPKITYPPTYKPKISYPPTYKPKITYPPTYKPKISYPPAYKPKISYPS 870
Score = 48.1 bits (113), Expect = 1e-05
Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 7/112 (6%)
Frame = +1
Query: 49 YPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAY-SAGQPGMN 225
YPP +P + YPP +P YPP +P + PP +P YP + Y +P +
Sbjct: 258 YPPTYKPKISYPPTYKPKPSYPPTYKPKVTYPPTYKPKPSYPPTYKPKITYPPTYKPKPS 317
Query: 226 YSNPSQPGMVYPNAPPGGMTYP---QGGMTYPS--GPSTGYNPGV-PPGSYP 363
Y P + YP +YP + TYP P Y P P SYP
Sbjct: 318 YPTPYKQKPSYPPIYKSKSSYPTSYKSKKTYPPTYKPKITYPPTYKPKPSYP 369
Score = 45.8 bits (107), Expect = 5e-05
Identities = 32/111 (28%), Positives = 45/111 (40%), Gaps = 6/111 (5%)
Frame = +1
Query: 49 YPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYSAGQPGMNY 228
YP + + YPP +P + YPP +P PP+ +P YP + +P + Y
Sbjct: 518 YPTSYKSKKTYPPTYKPKITYPPTYKPKPSYPPSYKPKTTYPPT---------YKPKIRY 568
Query: 229 SNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPST-GYNPGVPP-----GSYP 363
+P YP +TYP PS P+ P PP SYP
Sbjct: 569 PPTYKPKASYPPTYKPKITYPPTYKPKPSYPTPYKQKPSYPPIYKSKSSYP 619
Score = 45.4 bits (106), Expect = 7e-05
Identities = 36/118 (30%), Positives = 47/118 (39%), Gaps = 6/118 (5%)
Frame = +1
Query: 28 PHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYSA 207
P++ YPP + YP A + YPP +P + PP +P YP S
Sbjct: 601 PYKQKPSYPPIYKSKSSYPTAYKSKKTYPPTYKPKITYPPTYKPKPSYPPS--------- 651
Query: 208 GQPGMNYSNPSQPGMVYPNAPPGGMTYP---QGGMTYPSG--PSTGYNPGVPPG-SYP 363
+P + Y +P YP A +YP Q TYP P Y P P SYP
Sbjct: 652 YRPKITYPPTYKPKKSYPQAYKSKGSYPPSYQPKKTYPPSYKPKKTYPPTYKPKISYP 709
Score = 44.3 bits (103), Expect = 2e-04
Identities = 36/123 (29%), Positives = 55/123 (44%), Gaps = 2/123 (1%)
Frame = +1
Query: 1 PHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSS 180
P YA ++P + YPP +P Y + +P + YPP +P + +P + YP +
Sbjct: 754 PKPSYASS--YKPKIRYPPTYKPKPSYASSYKPKIRYPPTYKPKPSYASSYKPKIRYPPT 811
Query: 181 GTHGGAY-SAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGVPPG- 354
+Y S+ +P + Y +P + YP +TYP TY P Y P P
Sbjct: 812 YKPKPSYASSYKPKITYPPTYKPKISYPPTYKPKITYPP---TYK--PKISYPPAYKPKI 866
Query: 355 SYP 363
SYP
Sbjct: 867 SYP 869
Score = 43.1 bits (100), Expect = 3e-04
Identities = 32/109 (29%), Positives = 44/109 (40%), Gaps = 1/109 (0%)
Frame = +1
Query: 28 PHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYS- 204
P++ YPP + YP + + YPP +P + PP +P YP S YS
Sbjct: 321 PYKQKPSYPPIYKSKSSYPTSYKSKKTYPPTYKPKITYPPTYKPKPSYPPSYKPKKTYSP 380
Query: 205 AGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGVPP 351
+P + Y +P YP + TYP TY P Y P P
Sbjct: 381 TYKPKITYPPTYKPKPSYPPSYKPKTTYPP---TYK--PKISYPPTYKP 424
Score = 42.7 bits (99), Expect = 4e-04
Identities = 32/131 (24%), Positives = 48/131 (36%), Gaps = 20/131 (15%)
Frame = +1
Query: 28 PHQPGMVYPPAGQPGM--------------------VYPPAGQPGMIYPPAIQPGMVCPP 147
P++P YPP +P + YPP +P + YPP +P PP
Sbjct: 221 PYKPKTTYPPTYKPKISYPSIYKPKASYVSSYKSKKTYPPTYKPKISYPPTYKPKPSYPP 280
Query: 148 AGQPGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPST 327
+P + YP + +P +Y +P + YP +YP PS P
Sbjct: 281 TYKPKVTYPPT---------YKPKPSYPPTYKPKITYPPTYKPKPSYPTPYKQKPSYPPI 331
Query: 328 GYNPGVPPGSY 360
+ P SY
Sbjct: 332 YKSKSSYPTSY 342
Score = 42.0 bits (97), Expect = 8e-04
Identities = 24/88 (27%), Positives = 42/88 (47%)
Frame = +1
Query: 1 PHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSS 180
P YA ++P + YPP +P Y + +P + YPP +P + PP +P + YP +
Sbjct: 794 PKPSYASS--YKPKIRYPPTYKPKPSYASSYKPKITYPPTYKPKISYPPTYKPKITYPPT 851
Query: 181 GTHGGAYSAGQPGMNYSNPSQPGMVYPN 264
+P ++Y +P + YP+
Sbjct: 852 ---------YKPKISYPPAYKPKISYPS 870
Score = 41.2 bits (95), Expect = 0.001
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 1 PHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSS 180
P Y P ++P YPP +P + YPP + YP + + PP +P + YPS+
Sbjct: 684 PKKTYPPS--YKPKKTYPPTYKPKISYPPTYKTKPSYPASYKRKTSYPPTYKPKISYPST 741
Query: 181 GTHGGAY-SAGQPGMNYSNPSQPGMVYP 261
+Y +P +Y++ +P + YP
Sbjct: 742 YKAKPSYPPTYKPKPSYASSYKPKIRYP 769
Score = 40.4 bits (93), Expect = 0.002
Identities = 33/113 (29%), Positives = 45/113 (39%), Gaps = 10/113 (8%)
Frame = +1
Query: 55 PAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAY-SAGQPGMNYS 231
PA + YPP+ + + YPP +P + PP + YP S Y +P + Y
Sbjct: 122 PAYKAKTSYPPSYKHKITYPPTYKPKITYPPTYKQKPSYPPSYKPKTTYPPTYKPKITYP 181
Query: 232 ---------NPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGVPPGSYP 363
P +P YP +TYP TY PS Y P P +YP
Sbjct: 182 PTYKRKPSYTPYKPKATYPPTYKPKITYPP---TYKRKPS--YTPYKPKTTYP 229
>sp|Q9M291|SC24C_ARATH Protein transport protein Sec24-like CEF
Length = 1097
Score = 59.3 bits (142), Expect = 5e-09
Identities = 49/134 (36%), Positives = 62/134 (46%), Gaps = 25/134 (18%)
Frame = +1
Query: 34 QPGMVYPPAGQPGMVYPPAGQP------GMIYPPAIQPGM-VCPPAGQPGMVY----PSS 180
QPG +P +G PG V P+G P G PP + PGM + PP+G PG P S
Sbjct: 144 QPGG-FPASGPPGGV--PSGPPSGARPIGFGSPPPMGPGMSMPPPSGMPGGPLSNGPPPS 200
Query: 181 GTHGGAYS-----AGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYP---------SG 318
G HGG S +G PG SN P M+ P A P G + G M P +G
Sbjct: 201 GMHGGHLSNGPPPSGMPGGTLSNGPPPPMMGPGAFPRGSQFTSGPMMAPPPPYGQPPNAG 260
Query: 319 PSTGYNPGVPPGSY 360
P TG +P P ++
Sbjct: 261 PFTGNSPLSSPPAH 274
Score = 42.7 bits (99), Expect = 4e-04
Identities = 40/118 (33%), Positives = 47/118 (39%), Gaps = 3/118 (2%)
Frame = +1
Query: 19 PGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGA 198
PG P M P G P V P G +PP +P V PP+ QP GG
Sbjct: 87 PGPPPPAAMARP--GGPPQVSQPGG-----FPPVGRP--VAPPSNQPPF--------GGR 129
Query: 199 YSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNP---GVPPGSYP 363
S G S+ QPG + PPGG+ PSGP +G P G PP P
Sbjct: 130 PSTGPLVGGGSSFPQPGGFPASGPPGGV---------PSGPPSGARPIGFGSPPPMGP 178
Score = 35.0 bits (79), Expect = 0.094
Identities = 28/91 (30%), Positives = 33/91 (36%)
Frame = +1
Query: 52 PPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYSAGQPGMNYS 231
PP GQP P G + PPA + P PG+ Y GG P S
Sbjct: 251 PPYGQPPNAGPFTGNSPLSSPPAHS---IPAPTNFPGVPYGRPPMPGGFPYGAPPQQLPS 307
Query: 232 NPSQPGMVYPNAPPGGMTYPQGGMTYPSGPS 324
P PG +Y P + MT S PS
Sbjct: 308 APGTPGSIYGMGPMQNQS-----MTSVSSPS 333
>sp|P38486|LEG3_CANFA Galectin-3 (Galactose-specific lectin 3) (Mac-2 antigen)
(IgE-binding protein) (35 kDa lectin) (Carbohydrate
binding protein 35) (CBP 35) (Laminin-binding protein)
(Lectin L-29)
Length = 296
Score = 58.9 bits (141), Expect = 6e-09
Identities = 46/121 (38%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Frame = +1
Query: 1 PHGGYAPGVPH--QPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYP 174
P GGY P PG PP G PG PP G PG PP PG PP G PG P
Sbjct: 50 PPGGYPGQAPPGGYPGQA-PPGGYPGQA-PPGGYPGQA-PPGGYPGQA-PPGGYPGQAPP 105
Query: 175 SSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNP-GVPP 351
GT+ G + PG P+ PG P P G YP G G P G+P
Sbjct: 106 --GTYPGPTAPAYPG-----PTAPG-TQPGQPSGPGAYPPPGQPSAPGAYPAAGPFGIPA 157
Query: 352 G 354
G
Sbjct: 158 G 158
Score = 57.8 bits (138), Expect = 1e-08
Identities = 49/131 (37%), Positives = 51/131 (38%), Gaps = 10/131 (7%)
Frame = +1
Query: 1 PHGGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSS 180
P G G PG YP A PG PP G PG PP PG PP G PG P
Sbjct: 25 PWGNQPAGAGGYPGASYPGA-YPGQA-PPGGYPGQA-PPGGYPGQA-PPGGYPGQA-PPG 79
Query: 181 GTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGM-------TYP-QGGMTYPSGPSTGYN 336
G G A G PG APPGG TYP YP + G
Sbjct: 80 GYPGQAPPGGYPG--------------QAPPGGYPGQAPPGTYPGPTAPAYPGPTAPGTQ 125
Query: 337 PGVP--PGSYP 363
PG P PG+YP
Sbjct: 126 PGQPSGPGAYP 136
Score = 49.3 bits (116), Expect = 5e-06
Identities = 46/123 (37%), Positives = 50/123 (40%), Gaps = 2/123 (1%)
Frame = +1
Query: 1 PHGGYAPGVPH--QPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYP 174
P GGY P PG PP G PG PP G PG PP PG P PG P
Sbjct: 68 PPGGYPGQAPPGGYPGQA-PPGGYPGQA-PPGGYPGQA-PPGTYPGPTAP--AYPGPTAP 122
Query: 175 SSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGVPPG 354
GT G S PS PG YP A P G+ P G +T P Y+ +P G
Sbjct: 123 --GTQPGQPSGPGAYPPPGQPSAPG-AYPAAGPFGI--PAGPLTVP------YDLPLPGG 171
Query: 355 SYP 363
P
Sbjct: 172 VKP 174
>sp|Q9Y6V0|PCLO_HUMAN Piccolo protein (Aczonin)
Length = 5183
Score = 58.9 bits (141), Expect = 6e-09
Identities = 44/119 (36%), Positives = 50/119 (42%), Gaps = 7/119 (5%)
Frame = +1
Query: 28 PHQP-GMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYS 204
P QP G+ P A QPG V PP PG PPA G PPA Q G PSS G
Sbjct: 332 PAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKAL 391
Query: 205 AGQPGMNYSNPSQPGMVYPNAPPGGMTYP---QGGMTYPS---GPSTGYNPGVPPGSYP 363
A PG+ + QPG P G P Q G+ P+ GP+ PP P
Sbjct: 392 AQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPAQTKPPSQQP 450
Score = 57.0 bits (136), Expect = 2e-08
Identities = 34/87 (39%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +1
Query: 16 APGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGG 195
APG P PP+ QPG PP QPG P QPG PP+ QPG PS+
Sbjct: 433 APGPTKTPAQTKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSP 492
Query: 196 AYSAGQPGMNYSNP-SQPGMVYPNAPP 273
A + Q ++ P SQ G P PP
Sbjct: 493 AKPSAQ---QFTKPVSQTGFGKPLQPP 516
Score = 51.6 bits (122), Expect = 1e-06
Identities = 38/116 (32%), Positives = 43/116 (37%)
Frame = +1
Query: 10 GYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTH 189
G + QPG V PP PG PPA G PPA Q G P + QPG +
Sbjct: 337 GLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPG 396
Query: 190 GGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGVPPGS 357
G A QPG Q G P A G+ P P+ P PGS
Sbjct: 397 VGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPAQTKPPSQQPGS 452
Score = 50.4 bits (119), Expect = 2e-06
Identities = 37/111 (33%), Positives = 42/111 (37%), Gaps = 9/111 (8%)
Frame = +1
Query: 19 PGV----PHQPGMVYPPAGQPGMVYPPAGQPGMIYP-----PAIQPGMVCPPAGQPGMVY 171
PGV QPG PP Q G P A QPG+ P P P PP+ QPG
Sbjct: 395 PGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPAQTKPPSQQPGSTK 454
Query: 172 PSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPS 324
P QPG +P QPG P + G P P+ PS
Sbjct: 455 P---------PPQQPGPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPS 496
Score = 47.8 bits (112), Expect = 1e-05
Identities = 34/103 (33%), Positives = 38/103 (36%), Gaps = 5/103 (4%)
Frame = +1
Query: 34 QPGMVYP-----PAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGA 198
QPG+ P P P PP+ QPG PP QPG P QPG P S
Sbjct: 424 QPGLQSPAKAPGPTKTPAQTKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPS------ 477
Query: 199 YSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPST 327
QPG + QP P+A Q G P P T
Sbjct: 478 ---QQPGSAKPSAQQPSPAKPSAQQFTKPVSQTGFGKPLQPPT 517
Score = 45.1 bits (105), Expect = 9e-05
Identities = 37/114 (32%), Positives = 40/114 (35%), Gaps = 5/114 (4%)
Frame = +1
Query: 28 PHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGAYSA 207
P P PP QP PPA QPG QPG PPA G+ P + G
Sbjct: 296 PSLPSPSKPPIQQPTPGKPPAQQPG---HEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPP 352
Query: 208 GQPGMNYSNPSQP-GMVYPNAPPGGMTYPQGGMTYPSG----PSTGYNPGVPPG 354
QP P+QP G P A G P P P G P PG
Sbjct: 353 VQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPG 406
Score = 38.1 bits (87), Expect = 0.011
Identities = 27/73 (36%), Positives = 29/73 (39%), Gaps = 15/73 (20%)
Frame = +1
Query: 10 GYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPA---------------IQPGMVCP 144
G A P QPG PP+ QPG P A QP P A +QP V P
Sbjct: 461 GPAKPSPQQPGSTKPPSQQPGSAKPSAQQPSPAKPSAQQFTKPVSQTGFGKPLQPPTVSP 520
Query: 145 PAGQPGMVYPSSG 183
A QP PS G
Sbjct: 521 SAKQP----PSQG 529
>sp|Q8R4X3|RBM12_MOUSE RNA-binding protein 12 (RNA-binding motif protein 12) (SH3/WW
domain anchor protein in the nucleus) (SWAN)
Length = 1002
Score = 58.5 bits (140), Expect = 8e-09
Identities = 41/116 (35%), Positives = 46/116 (39%), Gaps = 1/116 (0%)
Frame = +1
Query: 19 PGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTHGGA 198
PG P P V P AG P P AG PG P A PG P +G PG P G G
Sbjct: 644 PGNPAVP--VIPSAGMPAAGIPTAGIPGAGLPSAGMPGAGMPSSGMPGPGMPGPGIPG-- 699
Query: 199 YSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGY-NPGVPPGSYP 363
AG PG P+ PG P G P M P+ P P +P + P
Sbjct: 700 --AGIPGPAMPGPAMPGPAMPGPAMPGPAMPGPAMPGPAMPGPAMPGPAIPGPAIP 753
Score = 48.5 bits (114), Expect = 8e-06
Identities = 36/118 (30%), Positives = 43/118 (36%), Gaps = 2/118 (1%)
Frame = +1
Query: 16 APGVPHQ--PGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGTH 189
A G+P PG P AG PG P +G PG P PG P PG P
Sbjct: 659 AAGIPTAGIPGAGLPSAGMPGAGMPSSGMPGPGMPGPGIPGAGIPGPAMPGPAMPGPAMP 718
Query: 190 GGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGVPPGSYP 363
G A PG P+ PG P G P + P+ P P +P + P
Sbjct: 719 GPA----MPGPAMPGPAMPGPAMPGPAMPGPAIPGPAIPGPAIP----GPAIPGPTIP 768
Score = 42.4 bits (98), Expect = 6e-04
Identities = 39/122 (31%), Positives = 45/122 (36%), Gaps = 8/122 (6%)
Frame = +1
Query: 7 GGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSG- 183
G PG P PG P PG P PG P PG P PG PS+G
Sbjct: 719 GPAMPG-PAMPGPAMPGPAMPGPAMPGPAIPGPAIPGPAIPGPAIPGPTIPGAGIPSAGG 777
Query: 184 ------THGGAYSAGQPGMNY-SNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPG 342
T G + P N+ N P P PP G+ G + P PS G N G
Sbjct: 778 EEHVFLTVGSKEANNGPPFNFPGNFGGPNAFGPPLPPPGLGGAFGDVR-PVMPSVG-NSG 835
Query: 343 VP 348
+P
Sbjct: 836 LP 837
Score = 37.7 bits (86), Expect = 0.014
Identities = 26/87 (29%), Positives = 28/87 (32%)
Frame = +1
Query: 7 GGYAPGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVYPSSGT 186
G PG P PG P PG P PG P PG P PG P
Sbjct: 699 GAGIPG-PAMPGPAMPGPAMPGPAMPGPAMPGPAMPGPAMPGPAMPGPAIPGPAIPGPAI 757
Query: 187 HGGAYSAGQPGMNYSNPSQPGMVYPNA 267
PG P+ PG P+A
Sbjct: 758 ---------PGPAIPGPTIPGAGIPSA 775
>sp|P20073|ANXA7_HUMAN Annexin A7 (Annexin VII) (Synexin)
Length = 488
Score = 56.6 bits (135), Expect = 3e-08
Identities = 52/131 (39%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Frame = +1
Query: 10 GYAP-GVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQP--GMVCPPAGQPGMVYPSS 180
GY P G P PG YPPAGQ +PP+GQ YP P G P P YP +
Sbjct: 5 GYPPTGYPPFPG--YPPAGQESS-FPPSGQ--YPYPSGFPPMGGGAYPQV--PSSGYPGA 57
Query: 181 GTHGGAYSAGQPGMNYSNPSQPGMV--YPNAPPG-GMTYPQGG---MTYPSGPSTGYNPG 342
G + PG Y QPG YP PPG G P GG YP PS Y G
Sbjct: 58 GGYPAPGGYPAPG-GYPGAPQPGGAPSYPGVPPGQGFGVPPGGAGFSGYPQPPSQSYGGG 116
Query: 343 ---VP-PGSYP 363
VP PG +P
Sbjct: 117 PAQVPLPGGFP 127
Score = 35.8 bits (81), Expect = 0.055
Identities = 40/114 (35%), Positives = 45/114 (39%), Gaps = 9/114 (7%)
Frame = +1
Query: 1 PHGGY--APGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQP--GMVCPP--AGQPG 162
P GY A G P PG P G PG P G P P + P G PP AG G
Sbjct: 50 PSSGYPGAGGYP-APGGYPAPGGYPG-APQPGGAPSY---PGVPPGQGFGVPPGGAGFSG 104
Query: 163 MVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGM---TYPQGGMTYPS 315
P S ++GG P+Q + P PGG YP G TYPS
Sbjct: 105 YPQPPSQSYGG------------GPAQ--VPLPGGFPGGQMPSQYPGGQPTYPS 144
>sp|P97384|ANX11_MOUSE Annexin A11 (Annexin XI) (Calcyclin-associated annexin 50) (CAP-50)
Length = 503
Score = 55.8 bits (133), Expect = 5e-08
Identities = 53/133 (39%), Positives = 55/133 (41%), Gaps = 13/133 (9%)
Frame = +1
Query: 1 PHGGYAPGVPHQPGMVYPPAGQP----GMVYPPAGQP--GM----IYPPAIQPGMVCPPA 150
P GGY P P G PPA QP GM PP G P GM YP A PG PP
Sbjct: 77 PGGGYPPVPPGGFGQP-PPAQQPVPPYGMYPPPGGNPPPGMPSYPAYPGAPVPGQPMPPT 135
Query: 151 GQ-PGMVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYP--SGP 321
GQ P YP GQP M Y S P PPG P +YP SG
Sbjct: 136 GQQPPGAYP-----------GQPPMTYPGQS------PMPPPGQQPVP----SYPGYSGS 174
Query: 322 STGYNPGVPPGSY 360
ST P VPP +
Sbjct: 175 ST-ITPAVPPAQF 186
Score = 53.1 bits (126), Expect = 3e-07
Identities = 46/115 (40%), Positives = 50/115 (43%), Gaps = 9/115 (7%)
Frame = +1
Query: 46 VYPPAGQPGMVYPPA-----GQPGMIYPPAIQP----GMVCPPAGQPGMVYPSSGTHGGA 198
+YP G PG YPP GQP PPA QP GM PP G P PS + GA
Sbjct: 72 LYP--GAPGGGYPPVPPGGFGQP----PPAQQPVPPYGMYPPPGGNPPPGMPSYPAYPGA 125
Query: 199 YSAGQPGMNYSNPSQPGMVYPNAPPGGMTYPQGGMTYPSGPSTGYNPGVPPGSYP 363
GQP M + PG YP PP MTYP G +P PPG P
Sbjct: 126 PVPGQP-MPPTGQQPPG-AYPGQPP---------MTYP-----GQSPMPPPGQQP 164
Score = 48.9 bits (115), Expect = 6e-06
Identities = 51/149 (34%), Positives = 53/149 (35%), Gaps = 34/149 (22%)
Frame = +1
Query: 19 PGVPHQPGMVYPPAGQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQ------PGMVYPSS 180
PG P P YPPA G + AG P PP I V AGQ GM S
Sbjct: 4 PGYP-PPAGGYPPAAPGGGPWGGAGYPPPSMPP-IGLDNVANYAGQFNQDYLSGMAANMS 61
Query: 181 GTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGG---------------MTYPQGGMTYPS 315
GT GGA M P PG YP PPGG M P GG P
Sbjct: 62 GTFGGA------NMPNLYPGAPGGGYPPVPPGGFGQPPPAQQPVPPYGMYPPPGGNPPPG 115
Query: 316 GPSTGYNPGV-------------PPGSYP 363
PS PG PPG+YP
Sbjct: 116 MPSYPAYPGAPVPGQPMPPTGQQPPGAYP 144
Score = 48.1 bits (113), Expect = 1e-05
Identities = 50/128 (39%), Positives = 51/128 (39%), Gaps = 21/128 (16%)
Frame = +1
Query: 43 MVYPPAGQPGMVYPPA---GQP--GMIYPPAIQPGM----VCPPAGQ------PGMVYPS 177
M YP P YPPA G P G YPP P + V AGQ GM
Sbjct: 1 MSYPGYPPPAGGYPPAAPGGGPWGGAGYPPPSMPPIGLDNVANYAGQFNQDYLSGMAANM 60
Query: 178 SGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYP----QGGMTYPSGPSTGYNPGV 345
SGT GGA M P PG YP PPGG P Q Y P G NP
Sbjct: 61 SGTFGGA------NMPNLYPGAPGGGYPPVPPGGFGQPPPAQQPVPPYGMYPPPGGNP-- 112
Query: 346 PPG--SYP 363
PPG SYP
Sbjct: 113 PPGMPSYP 120
>sp|Q15427|SF3B4_HUMAN Splicing factor 3B subunit 4 (Spliceosome associated protein 49)
(SAP 49) (SF3b50) (Pre-mRNA splicing factor SF3b 49 kDa
subunit)
Length = 424
Score = 55.1 bits (131), Expect = 9e-08
Identities = 51/142 (35%), Positives = 59/142 (41%), Gaps = 25/142 (17%)
Frame = +1
Query: 16 APGVPHQPGMVY-------PPAGQP--GMVYPPAGQPGMIYPPAIQPGMVCP--PAGQPG 162
AP P P V PP G P G PP PG + PP I P M P P G G
Sbjct: 214 APPPPSAPNPVVSSLGSGLPPPGMPPPGSFPPPVPPPGAL-PPGIPPAMPPPPMPPGAAG 272
Query: 163 MVYPSSGTHGGAYSAGQPGMNYSNPSQPGMVYPNAPPGGMTYP-----------QGGMTY 309
PS+GT G AG PG +S+P PPGGM +P G+ +
Sbjct: 273 HGPPSAGTPG----AGHPGHGHSHPHP-------FPPGGMPHPGMSQMQLAHHGPHGLGH 321
Query: 310 P-SGP--STGYNPGVPPGSYPH 366
P +GP S G P PP PH
Sbjct: 322 PHAGPPGSGGQPPPRPPPGMPH 343
Score = 40.0 bits (92), Expect = 0.003
Identities = 44/127 (34%), Positives = 49/127 (38%), Gaps = 6/127 (4%)
Frame = +1
Query: 1 PHGGYAPGVPHQPGMVYPPA---GQPGMVYPPAGQPGMIYPPAIQPGMVCPPAGQPGMVY 171
PH G+PH PGM G G+ +P AG PG P +P P G P M
Sbjct: 293 PHPFPPGGMPH-PGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGM 351
Query: 172 PSSGTHGGAYSAGQPGMNYSNPSQP-GM--VYPNAPPGGMTYPQGGMTYPSGPSTGYNPG 342
P G G+ G PG P P GM P PP G T P P P GY G
Sbjct: 352 PPRGPPFGS-PMGHPG-----PMPPHGMRGPPPLMPPHGYTGP------PRPPPYGYQRG 399
Query: 343 VPPGSYP 363
P P
Sbjct: 400 PLPPPRP 406
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,877,570
Number of Sequences: 369166
Number of extensions: 1715476
Number of successful extensions: 10741
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6028
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8769
length of database: 68,354,980
effective HSP length: 102
effective length of database: 49,512,010
effective search space used: 2970720600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)