Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_022_B23
(514 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q7VDC2|LGT_PROMA Prolipoprotein diacylglyceryl transferase 32 0.88
sp|P35559|IDE_RAT Insulin-degrading enzyme (Insulysin) (Ins... 28 9.7
sp|P14735|IDE_HUMAN Insulin-degrading enzyme (Insulysin) (I... 28 9.7
>sp|Q7VDC2|LGT_PROMA Prolipoprotein diacylglyceryl transferase
Length = 303
Score = 32.0 bits (71), Expect = 0.88
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +3
Query: 282 LYFICIDICLMYLLMLDFRSVLRISNGKAACIFFI 386
L+ ICI + L++L L+ R ++++ +G +CI+ I
Sbjct: 200 LWNICIFLILIFLFRLNIRGLMKLPSGALSCIYLI 234
>sp|P35559|IDE_RAT Insulin-degrading enzyme (Insulysin) (Insulinase) (Insulin
protease)
Length = 1019
Score = 28.5 bits (62), Expect = 9.7
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = -1
Query: 511 DNYINIF*QLFTIKFNKFNHTRTSTPTT*IHQTHTKPMYK----GTIKKIHAAFPLEIRR 344
D+ N+ +LF+ NK N P + H K +YK I+ ++ FP+ +
Sbjct: 265 DDLTNLVVKLFSEVENK-NVPLPEFPEHPFQEEHLKQLYKIVPIKDIRNLYVTFPIPDLQ 323
Query: 343 TLRKSNINKYIRHMSIH 293
KSN Y+ H+ H
Sbjct: 324 QYYKSNPGHYLGHLIGH 340
>sp|P14735|IDE_HUMAN Insulin-degrading enzyme (Insulysin) (Insulinase) (Insulin
protease)
Length = 1019
Score = 28.5 bits (62), Expect = 9.7
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = -1
Query: 511 DNYINIF*QLFTIKFNKFNHTRTSTPTT*IHQTHTKPMYK----GTIKKIHAAFPLEIRR 344
D+ N+ +LF+ NK N P + H K +YK I+ ++ FP+ +
Sbjct: 265 DDLTNLVVKLFSEVENK-NVPLPEFPEHPFQEEHLKQLYKIVPIKDIRNLYVTFPIPDLQ 323
Query: 343 TLRKSNINKYIRHMSIH 293
KSN Y+ H+ H
Sbjct: 324 KYYKSNPGHYLGHLIGH 340
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,126,450
Number of Sequences: 369166
Number of extensions: 746360
Number of successful extensions: 2204
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2203
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3304927425
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)