Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_022_B20
(866 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P27636|CDC15_YEAST Cell division control protein 15 46 2e-04
sp|P51958|CDC2_CARAU Cell division control protein 2 homolo... 43 0.001
sp|Q11179|YPC2_CAEEL Putative serine/threonine-protein kina... 43 0.001
sp|Q9DG98|CDC2_ORYLU Cell division control protein 2 homolo... 42 0.003
sp|Q9DGD3|CDC2_ORYLA Cell division control protein 2 homolo... 42 0.003
sp|Q9DGA2|CDC2_ORYJA Cell division control protein 2 homolo... 42 0.003
sp|Q9DGA5|CDC2_ORYCU Cell division control protein 2 homolo... 42 0.003
sp|P41892|CDC7_SCHPO Cell division control protein 7 41 0.004
sp|P39951|CDC2_RAT Cell division control protein 2 homolog ... 41 0.004
sp|P11440|CDC2_MOUSE Cell division control protein 2 homolo... 41 0.005
>sp|P27636|CDC15_YEAST Cell division control protein 15
Length = 974
Score = 45.8 bits (107), Expect = 2e-04
Identities = 28/82 (34%), Positives = 43/82 (52%)
Frame = +2
Query: 551 YIKHEELGHGPFGSVYRCSKFGSKDMVVLKKYKNPNDKDEELKKLMVEFSIYEKLGDHPR 730
Y + +G G +G VY+ + +V +K+ ND EEL +M E S+ + L +H
Sbjct: 25 YHLKQVIGRGSYGVVYKAINKHTDQVVAIKEVVYEND--EELNDIMAEISLLKNL-NHNN 81
Query: 731 ILKCNGFFRSVKASYIKLDYMA 796
I+K +GF R YI L+Y A
Sbjct: 82 IVKYHGFIRKSYELYILLEYCA 103
>sp|P51958|CDC2_CARAU Cell division control protein 2 homolog (p34 protein kinase)
(Cyclin-dependent kinase 1) (CDK1)
Length = 302
Score = 43.1 bits (100), Expect = 0.001
Identities = 21/86 (24%), Positives = 46/86 (53%)
Frame = +2
Query: 545 DDYIKHEELGHGPFGSVYRCSKFGSKDMVVLKKYKNPNDKDEELKKLMVEFSIYEKLGDH 724
DDY+K E++G G +G VY+ + +V +KK + ++++ + E S+ ++L H
Sbjct: 2 DDYLKIEKIGEGTYGVVYKGRNKTTGQVVAMKKIRLESEEEGVPSTAVREISLLKEL-QH 60
Query: 725 PRILKCNGFFRSVKASYIKLDYMAMD 802
P +++ Y+ ++++MD
Sbjct: 61 PNVVRLLDVLMQESKLYLVFEFLSMD 86
>sp|Q11179|YPC2_CAEEL Putative serine/threonine-protein kinase C05D10.2 in chromosome III
Length = 470
Score = 42.7 bits (99), Expect = 0.001
Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Frame = +2
Query: 533 TPDFDDYIKHEE------LGHGPFGSVYRCSKFGSKDMVVLKK----YKNPNDKDEELKK 682
T D D +I HE+ LG G +G V++ S++ V LKK ++NP D ++
Sbjct: 2 TDDVDTHI-HEKFDLQKRLGKGAYGIVWKAYDKRSRETVALKKIFDAFRNPTDSQRTFRE 60
Query: 683 LMVEFSIYEKLGDHPRILKCNGFFR--SVKASYIKLDYMAMDHYDL 814
+M ++ G HP ++K FR + + Y+ ++M D +++
Sbjct: 61 VM----FLQEFGKHPNVIKLYNIFRADNDRDIYLAFEFMEADLHNV 102
>sp|Q9DG98|CDC2_ORYLU Cell division control protein 2 homolog (p34 protein kinase)
(Cyclin-dependent kinase 1) (CDK1)
Length = 303
Score = 41.6 bits (96), Expect = 0.003
Identities = 20/86 (23%), Positives = 46/86 (53%)
Frame = +2
Query: 545 DDYIKHEELGHGPFGSVYRCSKFGSKDMVVLKKYKNPNDKDEELKKLMVEFSIYEKLGDH 724
+DY+K E++G G +G VY+ + +V +KK + ++++ + E S+ ++L H
Sbjct: 2 EDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQEL-KH 60
Query: 725 PRILKCNGFFRSVKASYIKLDYMAMD 802
P +++ Y+ ++++MD
Sbjct: 61 PNVVRLLDVLMQESRLYLIFEFLSMD 86
>sp|Q9DGD3|CDC2_ORYLA Cell division control protein 2 homolog (p34 protein kinase)
(Cyclin-dependent kinase 1) (CDK1)
Length = 303
Score = 41.6 bits (96), Expect = 0.003
Identities = 20/86 (23%), Positives = 46/86 (53%)
Frame = +2
Query: 545 DDYIKHEELGHGPFGSVYRCSKFGSKDMVVLKKYKNPNDKDEELKKLMVEFSIYEKLGDH 724
+DY+K E++G G +G VY+ + +V +KK + ++++ + E S+ ++L H
Sbjct: 2 EDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQEL-KH 60
Query: 725 PRILKCNGFFRSVKASYIKLDYMAMD 802
P +++ Y+ ++++MD
Sbjct: 61 PNVVRLLDVLMQESRLYLIFEFLSMD 86
>sp|Q9DGA2|CDC2_ORYJA Cell division control protein 2 homolog (p34 protein kinase)
(Cyclin-dependent kinase 1) (CDK1)
Length = 303
Score = 41.6 bits (96), Expect = 0.003
Identities = 20/86 (23%), Positives = 46/86 (53%)
Frame = +2
Query: 545 DDYIKHEELGHGPFGSVYRCSKFGSKDMVVLKKYKNPNDKDEELKKLMVEFSIYEKLGDH 724
+DY+K E++G G +G VY+ + +V +KK + ++++ + E S+ ++L H
Sbjct: 2 EDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQEL-KH 60
Query: 725 PRILKCNGFFRSVKASYIKLDYMAMD 802
P +++ Y+ ++++MD
Sbjct: 61 PNVVRLLDVLMQESRLYLIFEFLSMD 86
>sp|Q9DGA5|CDC2_ORYCU Cell division control protein 2 homolog (p34 protein kinase)
(Cyclin-dependent kinase 1) (CDK1)
Length = 303
Score = 41.6 bits (96), Expect = 0.003
Identities = 20/86 (23%), Positives = 46/86 (53%)
Frame = +2
Query: 545 DDYIKHEELGHGPFGSVYRCSKFGSKDMVVLKKYKNPNDKDEELKKLMVEFSIYEKLGDH 724
+DY+K E++G G +G VY+ + +V +KK + ++++ + E S+ ++L H
Sbjct: 2 EDYVKIEKIGEGTYGVVYKGRHKSTGQVVAMKKIRLESEEEGVPSTAVREVSLLQEL-KH 60
Query: 725 PRILKCNGFFRSVKASYIKLDYMAMD 802
P +++ Y+ ++++MD
Sbjct: 61 PNVVRLLDVLMQESRLYLIFEFLSMD 86
>sp|P41892|CDC7_SCHPO Cell division control protein 7
Length = 1062
Score = 41.2 bits (95), Expect = 0.004
Identities = 24/74 (32%), Positives = 39/74 (52%)
Frame = +2
Query: 569 LGHGPFGSVYRCSKFGSKDMVVLKKYKNPNDKDEELKKLMVEFSIYEKLGDHPRILKCNG 748
LG G FG+VYR + + V +KK K +L + +E + + L DHP I+K G
Sbjct: 15 LGKGAFGAVYRGLNIKNGETVAVKKVKLSKMLKSDLSVIKMEIDLLKNL-DHPNIVKYRG 73
Query: 749 FFRSVKASYIKLDY 790
+++ + I L+Y
Sbjct: 74 SYQTNDSLCIILEY 87
>sp|P39951|CDC2_RAT Cell division control protein 2 homolog (p34 protein kinase)
(Cyclin-dependent kinase 1) (CDK1)
Length = 297
Score = 41.2 bits (95), Expect = 0.004
Identities = 22/86 (25%), Positives = 45/86 (52%)
Frame = +2
Query: 545 DDYIKHEELGHGPFGSVYRCSKFGSKDMVVLKKYKNPNDKDEELKKLMVEFSIYEKLGDH 724
+DYIK E++G G +G VY+ + +V +KK + ++++ + E S+ ++L H
Sbjct: 2 EDYIKIEKIGEGTYGVVYKGRHRTTGQIVAMKKIRLESEEEGVPSTAIREISLLKEL-RH 60
Query: 725 PRILKCNGFFRSVKASYIKLDYMAMD 802
P I+ Y+ ++++MD
Sbjct: 61 PNIVSLQDVLMQDSRLYLIFEFLSMD 86
>sp|P11440|CDC2_MOUSE Cell division control protein 2 homolog (p34 protein kinase)
(Cyclin-dependent kinase 1) (CDK1)
Length = 297
Score = 40.8 bits (94), Expect = 0.005
Identities = 22/86 (25%), Positives = 45/86 (52%)
Frame = +2
Query: 545 DDYIKHEELGHGPFGSVYRCSKFGSKDMVVLKKYKNPNDKDEELKKLMVEFSIYEKLGDH 724
+DYIK E++G G +G VY+ + +V +KK + ++++ + E S+ ++L H
Sbjct: 2 EDYIKIEKIGEGTYGVVYKGRHRVTGQIVAMKKIRLESEEEGVPSTAIREISLLKEL-RH 60
Query: 725 PRILKCNGFFRSVKASYIKLDYMAMD 802
P I+ Y+ ++++MD
Sbjct: 61 PNIVSLQDVLMQDSRLYLIFEFLSMD 86
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,554,608
Number of Sequences: 369166
Number of extensions: 1769728
Number of successful extensions: 5429
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5413
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8550075140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)