Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_022_A16
(654 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P06198|MYSP_SCHMA Paramyosin 201 1e-51
sp|Q05870|MYSP_SCHJA Paramyosin (Antigen Sj97) 201 1e-51
sp|P35417|MYSP_ECHGR Paramyosin 182 7e-46
sp|Q8T305|MYSP_TAESA Paramyosin 182 7e-46
sp|P35418|MYSP_TAESO Paramyosin (Antigen B) (AgB) 182 7e-46
sp|O96064|MYSP_MYTGA Paramyosin 137 3e-32
sp|P02565|MYH3_CHICK Myosin heavy chain, fast skeletal musc... 122 8e-28
sp|P13538|MYSS_CHICK Myosin heavy chain, skeletal muscle, a... 118 2e-26
sp|P12847|MYH3_RAT Myosin heavy chain, fast skeletal muscle... 117 3e-26
sp|Q90339|MYSS_CYPCA Myosin heavy chain, fast skeletal muscle 117 3e-26
>sp|P06198|MYSP_SCHMA Paramyosin
Length = 866
Score = 201 bits (512), Expect = 1e-51
Identities = 105/146 (71%), Positives = 126/146 (86%)
Frame = +1
Query: 1 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 180
+R +QKLQ R+RELE++F+ E RRCK+ALAQARKFERQ+KELQ QA+DDRRMV+ELQDLL
Sbjct: 726 RRMVQKLQARVRELESEFDGESRRCKDALAQARKFERQYKELQTQAEDDRRMVLELQDLL 785
Query: 181 DKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAGSVMPG 360
DKTQ+KM+AYKRQLEE+E+VS + MNKYRKAQQQIE+AEHRADMAER +TVRR G PG
Sbjct: 786 DKTQMKMKAYKRQLEEMEEVSQITMNKYRKAQQQIEEAEHRADMAERTVTVRRVG---PG 842
Query: 361 STYRAISVVRETSTVNTSRGARATSI 438
RA+SV RE S V ++RG RATS+
Sbjct: 843 G--RAVSVARELS-VTSNRGMRATSM 865
Score = 33.9 bits (76), Expect = 0.38
Identities = 24/122 (19%), Positives = 53/122 (43%), Gaps = 22/122 (18%)
Frame = +1
Query: 4 RAIQKLQVRLRELETDFEAEQRRCKEA----------------------LAQARKFERQF 117
R I++L V + E+E +++E R K+ + + + ++
Sbjct: 508 RTIEELTVTITEMEVKYKSELSRLKKRYESNIADLEIQLDTANKANANLMKENKNLSQRV 567
Query: 118 KELQQQADDDRRMVVELQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAE 297
K+L+ D++RR+ ++ L T+ K ++EEI + A+ ++E+A+
Sbjct: 568 KDLETFLDEERRLREAAENNLQITEHKRLQLANEIEEIRSTLENLERLRKHAETELEEAQ 627
Query: 298 HR 303
R
Sbjct: 628 SR 629
>sp|Q05870|MYSP_SCHJA Paramyosin (Antigen Sj97)
Length = 866
Score = 201 bits (511), Expect = 1e-51
Identities = 105/146 (71%), Positives = 125/146 (85%)
Frame = +1
Query: 1 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 180
+R +QKLQ R+RELE +F+ E RRCK+ALAQARKFERQ+KELQ QA+DDRRMV+ELQDLL
Sbjct: 726 RRMVQKLQARVRELEAEFDGESRRCKDALAQARKFERQYKELQTQAEDDRRMVLELQDLL 785
Query: 181 DKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAGSVMPG 360
DKTQ+KM+AYKRQLEE+E+VS + MNKYRKAQQQIE+AEHRADMAER +TVRR G PG
Sbjct: 786 DKTQMKMKAYKRQLEEMEEVSQITMNKYRKAQQQIEEAEHRADMAERTVTVRRVG---PG 842
Query: 361 STYRAISVVRETSTVNTSRGARATSI 438
RA+SV RE S V ++RG RATS+
Sbjct: 843 G--RAVSVARELS-VTSNRGMRATSM 865
Score = 32.7 bits (73), Expect = 0.85
Identities = 18/100 (18%), Positives = 46/100 (46%)
Frame = +1
Query: 4 RAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLD 183
R ++ + + +LE +A + + + + ++ K+L+ DD+RR+ ++ L
Sbjct: 530 RLKKRYESSIADLEIQLDATNKANANLMKENKNLAQRVKDLETFLDDERRLREAAENNLQ 589
Query: 184 KTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHR 303
T+ K ++EE+ + A+ ++E+ + R
Sbjct: 590 ITEHKRIQLANEVEELRSAMENLERLRKHAETELEETQSR 629
>sp|P35417|MYSP_ECHGR Paramyosin
Length = 863
Score = 182 bits (462), Expect = 7e-46
Identities = 96/146 (65%), Positives = 120/146 (82%)
Frame = +1
Query: 1 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 180
+R +QKLQ R+RELE + + E RR KEA A ARK+ERQFKELQ Q++DD+RM++ELQDLL
Sbjct: 722 RRMVQKLQNRVRELEAELDGEIRRAKEAFASARKYERQFKELQTQSEDDKRMILELQDLL 781
Query: 181 DKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAGSVMPG 360
DKTQ+KM+AYKRQLEE E+VS + M+KYRKAQQQIE+AEHRADMAER +T++R + G
Sbjct: 782 DKTQIKMKAYKRQLEEQEEVSQLTMSKYRKAQQQIEEAEHRADMAERTITIKR---TIGG 838
Query: 361 STYRAISVVRETSTVNTSRGARATSI 438
RA+SVVRE ++V SRG RATSI
Sbjct: 839 PGSRAVSVVREINSV--SRGNRATSI 862
Score = 34.3 bits (77), Expect = 0.29
Identities = 21/100 (21%), Positives = 44/100 (44%)
Frame = +1
Query: 4 RAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLD 183
R +K + + ELE + + + + ++ +ELQ +D+RR + L
Sbjct: 526 RLKKKYEATISELEVQLDVANKANASLNRENKALAQRVQELQTALEDERRAREAAESNLQ 585
Query: 184 KTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHR 303
++ K A ++EEI ++ + A+ ++ DA R
Sbjct: 586 VSERKRIALTSEVEEIRSQLELSDRARKNAESELNDANGR 625
>sp|Q8T305|MYSP_TAESA Paramyosin
Length = 863
Score = 182 bits (462), Expect = 7e-46
Identities = 96/146 (65%), Positives = 120/146 (82%)
Frame = +1
Query: 1 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 180
+R +QKLQ R+RELE + + E RR KEA A ARK+ERQFKELQ Q++DD+RM++ELQDLL
Sbjct: 722 RRMVQKLQNRVRELEAELDGEIRRAKEAFANARKYERQFKELQTQSEDDKRMILELQDLL 781
Query: 181 DKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAGSVMPG 360
DKTQ+KM+AYKRQLEE E+VS + M+KYRKAQQQIE+AEHRADMAER +T++R + G
Sbjct: 782 DKTQIKMKAYKRQLEEQEEVSQLTMSKYRKAQQQIEEAEHRADMAERTITIKR---TIGG 838
Query: 361 STYRAISVVRETSTVNTSRGARATSI 438
RA+SVVRE ++V SRG RATSI
Sbjct: 839 PGSRAVSVVREINSV--SRGNRATSI 862
Score = 34.3 bits (77), Expect = 0.29
Identities = 21/100 (21%), Positives = 44/100 (44%)
Frame = +1
Query: 4 RAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLD 183
R +K + + ELE + + + + ++ +ELQ +D+RR + L
Sbjct: 526 RLKKKYEATISELEVQLDVANKANANLNRENKTLAQRVQELQAALEDERRAREAAESNLQ 585
Query: 184 KTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHR 303
++ K A ++EEI ++ + A+ ++ DA R
Sbjct: 586 VSERKRIALASEVEEIRSQLELSDRARKNAESELNDANGR 625
>sp|P35418|MYSP_TAESO Paramyosin (Antigen B) (AgB)
Length = 863
Score = 182 bits (462), Expect = 7e-46
Identities = 96/146 (65%), Positives = 120/146 (82%)
Frame = +1
Query: 1 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 180
+R +QKLQ R+RELE + + E RR KEA A ARK+ERQFKELQ Q++DD+RM++ELQDLL
Sbjct: 722 RRMVQKLQNRVRELEAELDGEIRRAKEAFANARKYERQFKELQTQSEDDKRMILELQDLL 781
Query: 181 DKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAGSVMPG 360
DKTQ+KM+AYKRQLEE E+VS + M+KYRKAQQQIE+AEHRADMAER +T++R + G
Sbjct: 782 DKTQIKMKAYKRQLEEQEEVSQLTMSKYRKAQQQIEEAEHRADMAERTITIKR---TIGG 838
Query: 361 STYRAISVVRETSTVNTSRGARATSI 438
RA+SVVRE ++V SRG RATSI
Sbjct: 839 PGSRAVSVVREINSV--SRGNRATSI 862
Score = 33.9 bits (76), Expect = 0.38
Identities = 21/100 (21%), Positives = 44/100 (44%)
Frame = +1
Query: 4 RAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLD 183
R +K + + ELE + + + + ++ +ELQ +D+RR + L
Sbjct: 526 RLKKKYEATISELEVQLDVANKANVNLNRENKTLAQRVQELQAALEDERRAREAAESNLQ 585
Query: 184 KTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHR 303
++ K A ++EEI ++ + A+ ++ DA R
Sbjct: 586 VSERKRIALASEVEEIRSQLELSDRARKNAESELNDANGR 625
>sp|O96064|MYSP_MYTGA Paramyosin
Length = 864
Score = 137 bits (344), Expect = 3e-32
Identities = 73/136 (53%), Positives = 97/136 (71%), Gaps = 1/136 (0%)
Frame = +1
Query: 1 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 180
KR I KLQ R+R+LE + EA+QRR +EA A ARKFERQ+KE Q +D+DRR V EL +
Sbjct: 735 KRQIAKLQARIRDLENELEADQRRLREAAASARKFERQWKETVQASDEDRRQVAELTSIT 794
Query: 181 DKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHL-TVRRAGSVMP 357
D+ +K + YKR +EE EDV+++ MNKYRKAQ I++AE RADMAE++L TVRR+
Sbjct: 795 DQLTMKCKTYKRMIEEAEDVASITMNKYRKAQSLIDEAEQRADMAEKNLQTVRRS----- 849
Query: 358 GSTYRAISVVRETSTV 405
R++SV RE + V
Sbjct: 850 ----RSMSVSREVTRV 861
Score = 47.0 bits (110), Expect = 4e-05
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Frame = +1
Query: 4 RAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVE------ 165
RAI +LQ L E+ET ++ E R K +K+E +EL+ D+ R E
Sbjct: 517 RAIDELQRTLVEVETRYKTEISRIK------KKYETDIRELEGALDNANRANAEYLKQIK 570
Query: 166 -LQDLLDKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAER 321
LQ+ + +L++ RQL++ + +V+ K QQ++EDA + AER
Sbjct: 571 SLQNRNRELELQLEEATRQLDDTRNQLSVSERKRITIQQELEDARSLLEHAER 623
Score = 33.9 bits (76), Expect = 0.38
Identities = 25/104 (24%), Positives = 45/104 (43%)
Frame = +1
Query: 4 RAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLD 183
+ I+ LQ R RELE E R+ + Q ER+ +QQ+ +D R ++ +
Sbjct: 567 KQIKSLQNRNRELELQLEEATRQLDDTRNQLSVSERKRITIQQELEDARSLLEHAERARK 626
Query: 184 KTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMA 315
+ ++ +L E++ T N R+ + I + D A
Sbjct: 627 NAENELGEVTVRLTEVQLQVTALTNDKRRMEADIAAMQSDLDDA 670
>sp|P02565|MYH3_CHICK Myosin heavy chain, fast skeletal muscle, embryonic
Length = 1940
Score = 122 bits (306), Expect = 8e-28
Identities = 59/116 (50%), Positives = 88/116 (75%)
Frame = +1
Query: 1 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 180
K+ IQKL+ R+RELE + +AEQ+R EA+ RK+ER+ KEL Q+++DR+ V+ LQDL+
Sbjct: 1814 KKQIQKLEARVRELEGEVDAEQKRSAEAVKGVRKYERRVKELTYQSEEDRKNVLRLQDLV 1873
Query: 181 DKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAGS 348
DK Q+K+++YKRQ EE E++S V ++K+RK Q ++E+AE RAD+AE + RA S
Sbjct: 1874 DKLQMKVKSYKRQAEEAEELSNVNLSKFRKIQHELEEAEERADIAESQVNKLRAKS 1929
Score = 37.4 bits (85), Expect = 0.034
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 1 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 180
++ I++LQ R+ ELE + EAE+ +A R+ +E+ ++ ++ D+
Sbjct: 1110 QKKIKELQARIEELEEEIEAERTSRAKAEKHRADLSRELEEISERLEEAGGATAAQIDMN 1169
Query: 181 DKTQLKMRAYKRQLEE--IEDVSTVAMNKYRKAQQQIEDAE 297
K + + + +R LEE ++ +T A + + A + E
Sbjct: 1170 KKREAEFQKMRRDLEEATLQHEATAAALRKKHADSTADVGE 1210
Score = 32.7 bits (73), Expect = 0.85
Identities = 18/98 (18%), Positives = 46/98 (46%)
Frame = +1
Query: 16 KLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQL 195
+L++ + +L ++ E+ + R E Q E++ + ++ +R + ++ + Q
Sbjct: 1228 ELKMEIDDLASNMESVSKAKANLEKMCRSLEDQLSEIKTKEEEQQRTINDISAQKARLQT 1287
Query: 196 KMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRAD 309
+ Y RQ+EE + + + + QQIE+ + +
Sbjct: 1288 ESGEYSRQVEEKDALISQLSRGKQAFTQQIEELKRHLE 1325
Score = 32.0 bits (71), Expect = 1.4
Identities = 16/72 (22%), Positives = 36/72 (50%)
Frame = +1
Query: 19 LQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLK 198
LQ++++ + RC + + + E + KEL ++A+D+ M EL K + +
Sbjct: 892 LQLQVQAEADGLADAEERCDQLIKTKIQLEAKIKELTERAEDEEEMNAELTAKKRKLEDE 951
Query: 199 MRAYKRQLEEIE 234
K+ ++++E
Sbjct: 952 CSELKKDIDDLE 963
>sp|P13538|MYSS_CHICK Myosin heavy chain, skeletal muscle, adult
Length = 1939
Score = 118 bits (295), Expect = 2e-26
Identities = 55/116 (47%), Positives = 86/116 (74%)
Frame = +1
Query: 1 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 180
K+ +QKL+ R+RELE + ++EQ+R EA+ RK+ER+ KEL Q ++DR+ ++ LQDL+
Sbjct: 1812 KKQLQKLEARVRELEGEVDSEQKRSAEAVKGVRKYERRVKELTYQCEEDRKNILRLQDLV 1871
Query: 181 DKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAGS 348
DK Q+K+++YKRQ EE E++S V ++K+RK Q ++E+AE RAD+AE + R S
Sbjct: 1872 DKLQMKVKSYKRQAEEAEELSNVNLSKFRKIQHELEEAEERADIAESQVNKLRVKS 1927
Score = 36.6 bits (83), Expect = 0.059
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 1 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 180
++ I++LQ R+ ELE + EAE+ +A R+ +E+ ++ ++ ++
Sbjct: 1108 QKKIKELQARIEELEEEIEAERTSRAKAEKHRADLSRELEEISERLEEAGGATAAQIEMN 1167
Query: 181 DKTQLKMRAYKRQLEE--IEDVSTVAMNKYRKAQQQIEDAE 297
K + + + +R LEE ++ +T A + + A E E
Sbjct: 1168 KKREAEFQKMRRDLEEATLQHEATAAALRKKHADSTAELGE 1208
Score = 34.3 bits (77), Expect = 0.29
Identities = 20/98 (20%), Positives = 46/98 (46%)
Frame = +1
Query: 16 KLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQL 195
+L++ + +L ++ E+ + R E Q E++ + + ++RM+ +L + Q
Sbjct: 1226 ELKMEIDDLASNMESVSKAKANLEKMCRTLEDQLSEIKTKEEQNQRMINDLNTQRARLQT 1285
Query: 196 KMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRAD 309
+ Y RQ EE + + + + QQIE+ + +
Sbjct: 1286 ETGEYSRQAEEKDALISQLSRGKQGFTQQIEELKRHLE 1323
Score = 29.6 bits (65), Expect = 7.2
Identities = 14/72 (19%), Positives = 36/72 (50%)
Frame = +1
Query: 19 LQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLK 198
LQ++++ + RC + + + E + KE+ ++A+D+ + EL K + +
Sbjct: 890 LQLQVQAEADSLADAEERCDQLIKTKIQLEAKIKEVTERAEDEEEINAELTAKKRKLEDE 949
Query: 199 MRAYKRQLEEIE 234
K+ ++++E
Sbjct: 950 CSELKKDIDDLE 961
>sp|P12847|MYH3_RAT Myosin heavy chain, fast skeletal muscle, embryonic
Length = 1940
Score = 117 bits (293), Expect = 3e-26
Identities = 56/114 (49%), Positives = 85/114 (74%)
Frame = +1
Query: 1 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 180
K+ IQKL+ R+RELE + E EQ+R E++ RK+ER+ KEL Q+++DR+ V+ LQDL+
Sbjct: 1810 KKQIQKLETRIRELEFELEGEQKRNTESVKGLRKYERRVKELTYQSEEDRKNVLRLQDLV 1869
Query: 181 DKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRA 342
DK Q+K+++YKRQ EE ++ + V + K+RKAQ ++E+AE RAD+AE + RA
Sbjct: 1870 DKLQVKVKSYKRQAEEADEQANVHLTKFRKAQHELEEAEERADIAESQVNKLRA 1923
Score = 41.2 bits (95), Expect = 0.002
Identities = 27/101 (26%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Frame = +1
Query: 1 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 180
++ I++LQ R+ ELE + EAE+ + Q + R+ +EL ++ ++ + +L
Sbjct: 1106 QKKIKELQARIEELEEEIEAERATRAKTEKQRSDYARELEELSERLEEAGGVTSTQIELN 1165
Query: 181 DKTQLKMRAYKRQLEE--IEDVSTVAMNKYRKAQQQIEDAE 297
K + + +R LEE ++ +TVA + + A E AE
Sbjct: 1166 KKREAEFLKLRRDLEEATLQHEATVATLRKKHADSAAELAE 1206
Score = 34.7 bits (78), Expect = 0.22
Identities = 25/117 (21%), Positives = 59/117 (50%), Gaps = 16/117 (13%)
Frame = +1
Query: 13 QKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQ 192
Q+L RL++ + ++ Q + ++ + + +++ KELQ + ++ + + KT+
Sbjct: 1075 QQLDERLKKKDFEYSQLQSKVEDEQTLSLQLQKKIKELQARIEELEEEIEAERATRAKTE 1134
Query: 193 LKMRAYKRQLEEIED---------VSTVAMNKYRKAQ-----QQIEDA--EHRADMA 315
+ Y R+LEE+ + + + +NK R+A+ + +E+A +H A +A
Sbjct: 1135 KQRSDYARELEELSERLEEAGGVTSTQIELNKKREAEFLKLRRDLEEATLQHEATVA 1191
Score = 32.3 bits (72), Expect = 1.1
Identities = 27/110 (24%), Positives = 55/110 (50%)
Frame = +1
Query: 16 KLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQL 195
+LQV+ E E +AE+R C + + + E + KE+ ++A+D+ + EL K +
Sbjct: 889 QLQVQA-ESENLLDAEER-CDQLIKAKFQLEAKIKEVTERAEDEEEINAELTAKKRKLED 946
Query: 196 KMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAG 345
+ K+ ++++E T+A ++E +H + ++LT AG
Sbjct: 947 ECSELKKDIDDLE--LTLA---------KVEKEKHATENKVKNLTEELAG 985
Score = 31.2 bits (69), Expect = 2.5
Identities = 20/98 (20%), Positives = 43/98 (43%)
Frame = +1
Query: 16 KLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQL 195
+ ++ + +L + E+ + R E Q E + + ++ +R + EL + Q
Sbjct: 1224 EFKLEIDDLSSSVESVSKSKANLEKICRTLEDQLSEARGKNEETQRSLSELTTQKSRLQT 1283
Query: 196 KMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRAD 309
+ RQLEE E + + + QQIE+ + + +
Sbjct: 1284 EAGELSRQLEEKESIVSQLSRSKQAFTQQIEELKRQLE 1321
Score = 30.0 bits (66), Expect = 5.5
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +1
Query: 1 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 180
++ + L+ +L E E QR E Q + + + EL +Q ++ +V +L
Sbjct: 1247 EKICRTLEDQLSEARGKNEETQRSLSELTTQKSRLQTEAGELSRQLEEKESIVSQLSRSK 1306
Query: 181 DKTQLKMRAYKRQLEE 228
++ KRQLEE
Sbjct: 1307 QAFTQQIEELKRQLEE 1322
>sp|Q90339|MYSS_CYPCA Myosin heavy chain, fast skeletal muscle
Length = 1935
Score = 117 bits (293), Expect = 3e-26
Identities = 56/116 (48%), Positives = 84/116 (72%)
Frame = +1
Query: 1 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 180
K+ +QKL+ R+RELE + EAEQRR +A+ RK+ER+ KEL Q ++D++ V+ LQDL+
Sbjct: 1810 KKQLQKLESRVRELEAEVEAEQRRGADAVKGVRKYERRVKELTYQTEEDKKNVIRLQDLV 1869
Query: 181 DKTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADMAERHLTVRRAGS 348
DK QLK++ YKRQ EE E+ + +++YRK Q ++E+A+ RAD+AE + RA S
Sbjct: 1870 DKLQLKVKVYKRQAEEAEEQTNTHLSRYRKVQHELEEAQERADVAESQVNKLRAKS 1925
Score = 36.6 bits (83), Expect = 0.059
Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Frame = +1
Query: 1 KRAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLL 180
++ I++LQ R+ ELE + EAE+ + Q R+ +E+ ++ ++ ++
Sbjct: 1106 QKKIKELQARIEELEEEIEAERAARAKVEKQRADLSRELEEISERLEEAGGATAAQIEMN 1165
Query: 181 DKTQLKMRAYKRQLEE--IEDVSTVAMNKYRKAQQQIEDAE 297
K + + + +R LEE ++ +T A + +A E E
Sbjct: 1166 KKREAEFQKMRRDLEESTLQHEATAAALRKEQADSVAELGE 1206
Score = 32.3 bits (72), Expect = 1.1
Identities = 20/96 (20%), Positives = 45/96 (46%)
Frame = +1
Query: 22 QVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLDKTQLKM 201
++ + +L ++ EA + R E Q E++ ++D++ R + ++ + Q +
Sbjct: 1226 KMEIDDLTSNMEAVAKAKANLEKMCRTLEDQLSEIKTKSDENVRQLNDMNAQRARLQTEN 1285
Query: 202 RAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRAD 309
+ RQLEE E + + + QQIE+ + +
Sbjct: 1286 GEFSRQLEEKEALVSQLTRGKQAYTQQIEELKRHIE 1321
Score = 30.4 bits (67), Expect = 4.2
Identities = 21/103 (20%), Positives = 41/103 (39%)
Frame = +1
Query: 4 RAIQKLQVRLRELETDFEAEQRRCKEALAQARKFERQFKELQQQADDDRRMVVELQDLLD 183
+A L+ R LE + + E + Q Q LQ + + R + E + L+
Sbjct: 1241 KAKANLEKMCRTLEDQLSEIKTKSDENVRQLNDMNAQRARLQTENGEFSRQLEEKEALVS 1300
Query: 184 KTQLKMRAYKRQLEEIEDVSTVAMNKYRKAQQQIEDAEHRADM 312
+ +AY +Q+EE++ + ++ A H D+
Sbjct: 1301 QLTRGKQAYTQQIEELKRHIEEEVKAKNALAHAVQSARHDCDL 1343
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,444,445
Number of Sequences: 369166
Number of extensions: 866049
Number of successful extensions: 4031
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3959
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5413810770
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)