Planarian EST Database


Dr_sW_022_A04

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_022_A04
         (813 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O61998|HSP90_BRUPA  Heat shock protein 90                      404   e-112
sp|P07900|HS90A_HUMAN  Heat shock protein HSP 90-alpha (HSP 86)   394   e-109
sp|O02705|HS90A_PIG  Heat shock protein HSP 90-alpha (HSP 86)     394   e-109
sp|P11501|HS90A_CHICK  Heat shock protein HSP 90-alpha            393   e-109
sp|P07901|HS90A_MOUSE  Heat shock protein HSP 90-alpha (HSP ...   392   e-109
sp|Q9GKX7|HS90A_HORSE  Heat shock protein HSP 90-alpha (HSP 86)   391   e-108
sp|P46633|HS90A_CRIGR  Heat shock protein HSP 90-alpha (HSP 86)   390   e-108
sp|Q90474|HS90A_BRARE  Heat shock protein HSP 90-alpha            387   e-107
sp|O57521|HS90B_BRARE  Heat shock protein HSP 90-beta             384   e-106
sp|Q9GKX8|HS90B_HORSE  Heat shock protein HSP 90-beta (HSP 84)    384   e-106
>sp|O61998|HSP90_BRUPA Heat shock protein 90
          Length = 717

 Score =  404 bits (1038), Expect = e-112
 Identities = 201/270 (74%), Positives = 228/270 (84%)
 Frame = +3

Query: 3    IRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDSVNRNKIAEFLRYYSTSSG 182
            IRKNLVKKC+ELF+EI EDKDN+KKFYEQFSKNIKLGIHEDS NR K++EFLR+Y+++S 
Sbjct: 394  IRKNLVKKCLELFDEIAEDKDNFKKFYEQFSKNIKLGIHEDSTNRKKLSEFLRFYTSASS 453

Query: 183  DEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTKRGFEVLLMVDPIDEYSVQ 362
            +EM SLKDYVSRMKENQK IY+ITGES++ V  SAFVER+ +RGFEV+ M DPIDEY VQ
Sbjct: 454  EEMTSLKDYVSRMKENQKQIYFITGESREAVASSAFVERVKRRGFEVIYMTDPIDEYCVQ 513

Query: 363  QLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCKVMKDILDKKVEKVTVSNR 542
            QLKEYDGKKLV VT                         LCKVMKDIL+KKVEKV VSNR
Sbjct: 514  QLKEYDGKKLVSVTKEGLELPESEEEKKKFEEDKVKFENLCKVMKDILEKKVEKVAVSNR 573

Query: 543  LVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVD 722
            LVSSPCCIVTS+YGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHS++K L+ RV+
Sbjct: 574  LVSSPCCIVTSEYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHSVIKALRERVE 633

Query: 723  ADKNDKSVKDLVMLLYETSLLSSGFTLEDP 812
            ADKNDK+VKDLV+LL+ET+LLSSGF+LEDP
Sbjct: 634  ADKNDKTVKDLVVLLFETALLSSGFSLEDP 663
>sp|P07900|HS90A_HUMAN Heat shock protein HSP 90-alpha (HSP 86)
          Length = 732

 Score =  394 bits (1011), Expect = e-109
 Identities = 195/270 (72%), Positives = 224/270 (82%)
 Frame = +3

Query: 3    IRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDSVNRNKIAEFLRYYSTSSG 182
            IRKNLVKKC+ELF E+ EDK+NYKKFYEQFSKNIKLGIHEDS NR K++E LRYY+++SG
Sbjct: 412  IRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASG 471

Query: 183  DEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTKRGFEVLLMVDPIDEYSVQ 362
            DEM SLKDY +RMKENQK IYYITGE+KD V +SAFVERL K G EV+ M++PIDEY VQ
Sbjct: 472  DEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQ 531

Query: 363  QLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCKVMKDILDKKVEKVTVSNR 542
            QLKE++GK LV VT                         LCK+MKDIL+KKVEKV VSNR
Sbjct: 532  QLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNR 591

Query: 543  LVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVD 722
            LV+SPCCIVTS YGW+ANMERIMKAQALRD+STMGYMAAKKHLEINPDHSI++TL+ + +
Sbjct: 592  LVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAE 651

Query: 723  ADKNDKSVKDLVMLLYETSLLSSGFTLEDP 812
            ADKNDKSVKDLV+LLYET+LLSSGF+LEDP
Sbjct: 652  ADKNDKSVKDLVILLYETALLSSGFSLEDP 681
>sp|O02705|HS90A_PIG Heat shock protein HSP 90-alpha (HSP 86)
          Length = 733

 Score =  394 bits (1011), Expect = e-109
 Identities = 195/270 (72%), Positives = 224/270 (82%)
 Frame = +3

Query: 3    IRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDSVNRNKIAEFLRYYSTSSG 182
            IRKNLVKKC+ELF E+ EDK+NYKKFYEQFSKNIKLGIHEDS NR K++E LRYY+++SG
Sbjct: 413  IRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASG 472

Query: 183  DEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTKRGFEVLLMVDPIDEYSVQ 362
            DEM SLKDY +RMKENQK IYYITGE+KD V +SAFVERL K G EV+ M++PIDEY VQ
Sbjct: 473  DEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQ 532

Query: 363  QLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCKVMKDILDKKVEKVTVSNR 542
            QLKE++GK LV VT                         LCK+MKDIL+KKVEKV VSNR
Sbjct: 533  QLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNR 592

Query: 543  LVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVD 722
            LV+SPCCIVTS YGW+ANMERIMKAQALRD+STMGYMAAKKHLEINPDHSI++TL+ + +
Sbjct: 593  LVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAE 652

Query: 723  ADKNDKSVKDLVMLLYETSLLSSGFTLEDP 812
            ADKNDKSVKDLV+LLYET+LLSSGF+LEDP
Sbjct: 653  ADKNDKSVKDLVILLYETALLSSGFSLEDP 682
>sp|P11501|HS90A_CHICK Heat shock protein HSP 90-alpha
          Length = 728

 Score =  393 bits (1010), Expect = e-109
 Identities = 194/270 (71%), Positives = 224/270 (82%)
 Frame = +3

Query: 3    IRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDSVNRNKIAEFLRYYSTSSG 182
            IRKNLVKKC+ELF E+ EDK+NYKKFYEQFSKNIKLGIHEDS NR K++E LRYY+++SG
Sbjct: 408  IRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASG 467

Query: 183  DEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTKRGFEVLLMVDPIDEYSVQ 362
            DEM SLKDY +RMKENQK +YYITGE+KD V +SAFVERL K G EV+ M++PIDEY VQ
Sbjct: 468  DEMVSLKDYCTRMKENQKHVYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQ 527

Query: 363  QLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCKVMKDILDKKVEKVTVSNR 542
            QLKE++GK LV VT                         LCK+MKDIL+KKVEKV VSNR
Sbjct: 528  QLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKAKFENLCKIMKDILEKKVEKVVVSNR 587

Query: 543  LVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVD 722
            LV+SPCCIVTS YGW+ANMERIMKAQALRD+STMGYMAAKKHLEINPDHSI++TL+ + +
Sbjct: 588  LVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAE 647

Query: 723  ADKNDKSVKDLVMLLYETSLLSSGFTLEDP 812
            ADKNDKSVKDLV+LLYET+LLSSGF+LEDP
Sbjct: 648  ADKNDKSVKDLVILLYETALLSSGFSLEDP 677
>sp|P07901|HS90A_MOUSE Heat shock protein HSP 90-alpha (HSP 86) (Tumor specific
            transplantation 86 kDa antigen) (TSTA)
          Length = 733

 Score =  392 bits (1007), Expect = e-109
 Identities = 194/270 (71%), Positives = 224/270 (82%)
 Frame = +3

Query: 3    IRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDSVNRNKIAEFLRYYSTSSG 182
            IRKNLVKKC+ELF E+ EDK+NYKKFYEQFSKNIKLGIHEDS NR K++E LRYY+++SG
Sbjct: 413  IRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASG 472

Query: 183  DEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTKRGFEVLLMVDPIDEYSVQ 362
            DEM SLKDY +RMKENQK IY+ITGE+KD V +SAFVERL K G EV+ M++PIDEY VQ
Sbjct: 473  DEMVSLKDYCTRMKENQKHIYFITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQ 532

Query: 363  QLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCKVMKDILDKKVEKVTVSNR 542
            QLKE++GK LV VT                         LCK+MKDIL+KKVEKV VSNR
Sbjct: 533  QLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNR 592

Query: 543  LVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVD 722
            LV+SPCCIVTS YGW+ANMERIMKAQALRD+STMGYMAAKKHLEINPDHSI++TL+ + +
Sbjct: 593  LVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAE 652

Query: 723  ADKNDKSVKDLVMLLYETSLLSSGFTLEDP 812
            ADKNDKSVKDLV+LLYET+LLSSGF+LEDP
Sbjct: 653  ADKNDKSVKDLVILLYETALLSSGFSLEDP 682
>sp|Q9GKX7|HS90A_HORSE Heat shock protein HSP 90-alpha (HSP 86)
          Length = 719

 Score =  391 bits (1005), Expect = e-108
 Identities = 194/270 (71%), Positives = 223/270 (82%)
 Frame = +3

Query: 3    IRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDSVNRNKIAEFLRYYSTSSG 182
            IRKNLVKKC+ELF E+ EDK+NYKKFYEQ SKNIKLGIHEDS NR K++E LRYY+++SG
Sbjct: 402  IRKNLVKKCLELFTELAEDKENYKKFYEQLSKNIKLGIHEDSQNRKKLSELLRYYTSASG 461

Query: 183  DEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTKRGFEVLLMVDPIDEYSVQ 362
            DEM SLKDY +RMKENQK IYYITGE+KD V +SAFVERL K G EV+ M++PIDEY VQ
Sbjct: 462  DEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQ 521

Query: 363  QLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCKVMKDILDKKVEKVTVSNR 542
            QLKE++GK LV VT                         LCK+MKDIL+KKVEKV VSNR
Sbjct: 522  QLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNR 581

Query: 543  LVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVD 722
            LV+SPCCIVTS YGW+ANMERIMKAQALRD+STMGYMAAKKHLEINPDHSI++TL+ + +
Sbjct: 582  LVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAE 641

Query: 723  ADKNDKSVKDLVMLLYETSLLSSGFTLEDP 812
            ADKNDKSVKDLV+LLYET+LLSSGF+LEDP
Sbjct: 642  ADKNDKSVKDLVILLYETALLSSGFSLEDP 671
>sp|P46633|HS90A_CRIGR Heat shock protein HSP 90-alpha (HSP 86)
          Length = 733

 Score =  390 bits (1001), Expect = e-108
 Identities = 192/270 (71%), Positives = 224/270 (82%)
 Frame = +3

Query: 3    IRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDSVNRNKIAEFLRYYSTSSG 182
            IRKNLV+KC+ELF E+ EDK+NYKKFYEQFSKNIKLGIHEDS NR K++E LRYY+++SG
Sbjct: 413  IRKNLVRKCLELFHELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASG 472

Query: 183  DEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTKRGFEVLLMVDPIDEYSVQ 362
            DEM SLKDY +RMKENQK IY+ITGE+KD V +SAFVERL K G EV+ M++PIDEY VQ
Sbjct: 473  DEMVSLKDYCTRMKENQKHIYFITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQ 532

Query: 363  QLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCKVMKDILDKKVEKVTVSNR 542
            QLKE++GK LV VT                         LCK+MKDIL+KKVEKV VSNR
Sbjct: 533  QLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNR 592

Query: 543  LVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVD 722
            LV+SPCCIVTS YGW+ANMERI+KAQALRD+STMGYMAAKKHLEINPDHSI++TL+ + +
Sbjct: 593  LVTSPCCIVTSTYGWTANMERIIKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAE 652

Query: 723  ADKNDKSVKDLVMLLYETSLLSSGFTLEDP 812
            ADKNDKSVKDLV+LLYET+LLSSGF+LEDP
Sbjct: 653  ADKNDKSVKDLVILLYETALLSSGFSLEDP 682
>sp|Q90474|HS90A_BRARE Heat shock protein HSP 90-alpha
          Length = 726

 Score =  387 bits (994), Expect = e-107
 Identities = 190/270 (70%), Positives = 222/270 (82%)
 Frame = +3

Query: 3    IRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDSVNRNKIAEFLRYYSTSSG 182
            IRKNLVKKC++LF E+ EDKDNYKK+YEQFSKNIKLGIHEDS NR K+++ LRYY+++SG
Sbjct: 406  IRKNLVKKCLDLFTELAEDKDNYKKYYEQFSKNIKLGIHEDSQNRKKLSDLLRYYTSASG 465

Query: 183  DEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTKRGFEVLLMVDPIDEYSVQ 362
            DEM SLKDYVSRMK+ QK IYYITGE+KD V +SAFVERL K G EV+ M++PIDEY VQ
Sbjct: 466  DEMVSLKDYVSRMKDTQKHIYYITGETKDQVANSAFVERLRKAGLEVIYMIEPIDEYCVQ 525

Query: 363  QLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCKVMKDILDKKVEKVTVSNR 542
            QLKEYDGK LV VT                         LCK+MKDILDKK+EKVTVSNR
Sbjct: 526  QLKEYDGKNLVSVTKEGLELPEDEEEKKKQDELKAKYENLCKIMKDILDKKIEKVTVSNR 585

Query: 543  LVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVD 722
            LVSSPCCIVTS YGW+ANMERIMK+QALRD+STMGYM AKKHLEINP H I++TL+ + +
Sbjct: 586  LVSSPCCIVTSTYGWTANMERIMKSQALRDNSTMGYMTAKKHLEINPAHPIVETLREKAE 645

Query: 723  ADKNDKSVKDLVMLLYETSLLSSGFTLEDP 812
            A+KNDK+VKDLV+LL+ET+LLSSGFTL+DP
Sbjct: 646  AEKNDKAVKDLVILLFETALLSSGFTLDDP 675
>sp|O57521|HS90B_BRARE Heat shock protein HSP 90-beta
          Length = 725

 Score =  384 bits (987), Expect = e-106
 Identities = 191/270 (70%), Positives = 218/270 (80%)
 Frame = +3

Query: 3    IRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDSVNRNKIAEFLRYYSTSSG 182
            IRKN+VKKC+ELF E+ EDKDNYKKFY+ FSKN+KLGIHED  NR K++E LRY S+ SG
Sbjct: 403  IRKNIVKKCLELFAELAEDKDNYKKFYDAFSKNLKLGIHEDCQNRKKLSELLRYQSSQSG 462

Query: 183  DEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTKRGFEVLLMVDPIDEYSVQ 362
            DEM SL +YVSRMKENQK IYYITGESKD V HSAFVER+ KRGFEVL M +PIDEY VQ
Sbjct: 463  DEMTSLTEYVSRMKENQKSIYYITGESKDQVAHSAFVERVCKRGFEVLYMTEPIDEYCVQ 522

Query: 363  QLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCKVMKDILDKKVEKVTVSNR 542
            QLK++DGK LV VT                         LCK+MK+ILDKKVEKVTVSNR
Sbjct: 523  QLKDFDGKSLVSVTKEGLELPEDEDEKKKMEEDKAKFENLCKLMKEILDKKVEKVTVSNR 582

Query: 543  LVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVD 722
            LVSSPCCIVTS YGW+ANMERIMKAQALRD+STMGYM A KHLEINPDH IM+TL+ + +
Sbjct: 583  LVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMANKHLEINPDHPIMETLRQKAE 642

Query: 723  ADKNDKSVKDLVMLLYETSLLSSGFTLEDP 812
            ADKN K+VKDLV+LL+ET+LLSSGF+L+DP
Sbjct: 643  ADKNTKAVKDLVILLFETALLSSGFSLDDP 672
>sp|Q9GKX8|HS90B_HORSE Heat shock protein HSP 90-beta (HSP 84)
          Length = 724

 Score =  384 bits (985), Expect = e-106
 Identities = 188/270 (69%), Positives = 221/270 (81%)
 Frame = +3

Query: 3    IRKNLVKKCIELFEEIMEDKDNYKKFYEQFSKNIKLGIHEDSVNRNKIAEFLRYYSTSSG 182
            IRKN+VKKC+ELF E+ EDK+NYKKFYE FSKN+KLGIHEDS NR +++E LRY+++ SG
Sbjct: 404  IRKNIVKKCLELFSELAEDKENYKKFYEAFSKNLKLGIHEDSTNRRRLSELLRYHTSQSG 463

Query: 183  DEMCSLKDYVSRMKENQKDIYYITGESKDNVNHSAFVERLTKRGFEVLLMVDPIDEYSVQ 362
            DEM SL +YVSRMKE QK IYYITGESK+ V +SAFVER+ KRGFEV+ M +PIDEY VQ
Sbjct: 464  DEMTSLSEYVSRMKETQKSIYYITGESKEQVANSAFVERVRKRGFEVVYMTEPIDEYCVQ 523

Query: 363  QLKEYDGKKLVCVTXXXXXXXXXXXXXXXXXXXXXXXXXLCKVMKDILDKKVEKVTVSNR 542
            QLKE+DGK LV VT                         LCK+MK+ILDKKVEKVT+SNR
Sbjct: 524  QLKEFDGKSLVSVTKEGLELPEDEEEKKKMEESKAKFENLCKLMKEILDKKVEKVTISNR 583

Query: 543  LVSSPCCIVTSQYGWSANMERIMKAQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVD 722
            LVSSPCCIVTS YGW+ANMERIMKAQALRD+STMGYM AKKHLEINPDH I++TL+ + +
Sbjct: 584  LVSSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAE 643

Query: 723  ADKNDKSVKDLVMLLYETSLLSSGFTLEDP 812
            ADKNDK+VKDLV+LL+ET+LLSSGF+LEDP
Sbjct: 644  ADKNDKAVKDLVVLLFETALLSSGFSLEDP 673
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,447,422
Number of Sequences: 369166
Number of extensions: 1355540
Number of successful extensions: 4939
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4584
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4764
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7763237265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)