Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_021_P18
(789 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q26065|ACT_PLAMG Actin, adductor muscle 458 e-129
sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3) 457 e-128
sp|P30163|ACT2_ONCVO Actin-2 457 e-128
sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cyt... 457 e-128
sp|P41340|ACT3_LIMPO Actin-3 457 e-128
sp|P92176|ACT2_LUMTE Actin-2 457 e-128
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 457 e-128
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 457 e-128
sp|O42161|ACTB_SALSA Actin, cytoplasmic 1 (Beta-actin) 456 e-128
sp|P68143|ACTB_OREMO Actin, cytoplasmic 1 (Beta-actin) >gi|... 456 e-128
>sp|Q26065|ACT_PLAMG Actin, adductor muscle
Length = 376
Score = 458 bits (1178), Expect = e-129
Identities = 224/237 (94%), Positives = 232/237 (97%)
Frame = +3
Query: 3 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 182
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 183 NREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 362
NREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA
Sbjct: 116 NREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 175
Query: 363 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASS 542
ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SS
Sbjct: 176 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFENEMATAASSS 235
Query: 543 SLEKSYELPDGRVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDV*YQK 713
SLEKSYELPDG+VITIGNERFRCPE+LFQPSFLG+ES GIHETTYNSIMKCDV +K
Sbjct: 236 SLEKSYELPDGQVITIGNERFRCPESLFQPSFLGMESAGIHETTYNSIMKCDVDIRK 292
Score = 57.0 bits (136), Expect = 6e-08
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +1
Query: 703 DIRKDLYANIVLSGGSTMYPGIADRMQKE 789
DIRKDLYAN VLSGG+TM+PGIADRMQKE
Sbjct: 289 DIRKDLYANTVLSGGTTMFPGIADRMQKE 317
>sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3)
Length = 375
Score = 457 bits (1177), Expect = e-128
Identities = 224/237 (94%), Positives = 231/237 (97%)
Frame = +3
Query: 3 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 182
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 55 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 114
Query: 183 NREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 362
NREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHA
Sbjct: 115 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 174
Query: 363 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASS 542
ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TAS+SS
Sbjct: 175 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATASSSS 234
Query: 543 SLEKSYELPDGRVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDV*YQK 713
SLEKSYELPDG+VITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCDV +K
Sbjct: 235 SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESSGIHETTYNSIMKCDVDIRK 291
Score = 58.5 bits (140), Expect = 2e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +1
Query: 703 DIRKDLYANIVLSGGSTMYPGIADRMQKE 789
DIRKDLYAN VLSGG+TMYPGIADRMQKE
Sbjct: 288 DIRKDLYANTVLSGGTTMYPGIADRMQKE 316
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 457 bits (1176), Expect = e-128
Identities = 222/237 (93%), Positives = 231/237 (97%)
Frame = +3
Query: 3 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 182
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 183 NREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 362
NREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 175
Query: 363 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASS 542
ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SS
Sbjct: 176 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 235
Query: 543 SLEKSYELPDGRVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDV*YQK 713
SLEKSYELPDG+VIT+GNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCD+ +K
Sbjct: 236 SLEKSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDIDIRK 292
Score = 58.9 bits (141), Expect = 2e-08
Identities = 28/29 (96%), Positives = 28/29 (96%)
Frame = +1
Query: 703 DIRKDLYANIVLSGGSTMYPGIADRMQKE 789
DIRKDLYAN VLSGGSTMYPGIADRMQKE
Sbjct: 289 DIRKDLYANNVLSGGSTMYPGIADRMQKE 317
>sp|O93400|ACTB_XENLA Actin, cytoplasmic 1 (Beta-actin) (Cytoplasmic beta actin)
Length = 375
Score = 457 bits (1175), Expect = e-128
Identities = 223/237 (94%), Positives = 231/237 (97%)
Frame = +3
Query: 3 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 182
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 55 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 114
Query: 183 NREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 362
NREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHA
Sbjct: 115 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 174
Query: 363 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASS 542
ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SS
Sbjct: 175 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSS 234
Query: 543 SLEKSYELPDGRVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDV*YQK 713
SLEKSYELPDG+VITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCDV +K
Sbjct: 235 SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRK 291
Score = 58.5 bits (140), Expect = 2e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +1
Query: 703 DIRKDLYANIVLSGGSTMYPGIADRMQKE 789
DIRKDLYAN VLSGG+TMYPGIADRMQKE
Sbjct: 288 DIRKDLYANTVLSGGTTMYPGIADRMQKE 316
>sp|P41340|ACT3_LIMPO Actin-3
Length = 376
Score = 457 bits (1175), Expect = e-128
Identities = 223/237 (94%), Positives = 231/237 (97%)
Frame = +3
Query: 3 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 182
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 183 NREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 362
NREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHA
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHA 175
Query: 363 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASS 542
ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDFD EM TA++SS
Sbjct: 176 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFDQEMATAASSS 235
Query: 543 SLEKSYELPDGRVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDV*YQK 713
SLEKSYELPDG+VITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCD+ +K
Sbjct: 236 SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESSGIHETTYNSIMKCDIDIRK 292
Score = 58.5 bits (140), Expect = 2e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +1
Query: 703 DIRKDLYANIVLSGGSTMYPGIADRMQKE 789
DIRKDLYAN VLSGG+TMYPGIADRMQKE
Sbjct: 289 DIRKDLYANTVLSGGTTMYPGIADRMQKE 317
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 457 bits (1175), Expect = e-128
Identities = 224/237 (94%), Positives = 231/237 (97%)
Frame = +3
Query: 3 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 182
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 183 NREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 362
NREKMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA
Sbjct: 116 NREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 175
Query: 363 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASS 542
ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TASASS
Sbjct: 176 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMNTASASS 235
Query: 543 SLEKSYELPDGRVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDV*YQK 713
SLEKSYELPDG+VITIGNERFRCPEA+F SFLG+ESVGIHETTYNSIMKCDV +K
Sbjct: 236 SLEKSYELPDGQVITIGNERFRCPEAMFHASFLGMESVGIHETTYNSIMKCDVDIRK 292
Score = 57.0 bits (136), Expect = 6e-08
Identities = 26/29 (89%), Positives = 28/29 (96%)
Frame = +1
Query: 703 DIRKDLYANIVLSGGSTMYPGIADRMQKE 789
DIRKDLYAN VLSGG+TM+PGIADRMQKE
Sbjct: 289 DIRKDLYANTVLSGGTTMFPGIADRMQKE 317
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 457 bits (1175), Expect = e-128
Identities = 222/237 (93%), Positives = 231/237 (97%)
Frame = +3
Query: 3 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 182
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 183 NREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 362
NREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 175
Query: 363 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASS 542
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SS
Sbjct: 176 IMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSS 235
Query: 543 SLEKSYELPDGRVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDV*YQK 713
SLEKSYELPDG+VITIGNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDV +K
Sbjct: 236 SLEKSYELPDGQVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRK 292
Score = 58.2 bits (139), Expect = 3e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +1
Query: 703 DIRKDLYANIVLSGGSTMYPGIADRMQKE 789
DIRKDLYAN VLSGGSTM+PGIADRMQKE
Sbjct: 289 DIRKDLYANTVLSGGSTMFPGIADRMQKE 317
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 457 bits (1175), Expect = e-128
Identities = 222/237 (93%), Positives = 232/237 (97%)
Frame = +3
Query: 3 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 182
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 56 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 115
Query: 183 NREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 362
NREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA
Sbjct: 116 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 175
Query: 363 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASS 542
I+RLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA++SS
Sbjct: 176 IMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSS 235
Query: 543 SLEKSYELPDGRVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDV*YQK 713
SLEKSYELPDG+VITIGNERFRCPEALFQPSFLG+E+ GIHETTYNSIMKCDV +K
Sbjct: 236 SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMEAAGIHETTYNSIMKCDVDIRK 292
Score = 58.2 bits (139), Expect = 3e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +1
Query: 703 DIRKDLYANIVLSGGSTMYPGIADRMQKE 789
DIRKDLYAN VLSGGSTM+PGIADRMQKE
Sbjct: 289 DIRKDLYANTVLSGGSTMFPGIADRMQKE 317
>sp|O42161|ACTB_SALSA Actin, cytoplasmic 1 (Beta-actin)
Length = 375
Score = 456 bits (1174), Expect = e-128
Identities = 223/237 (94%), Positives = 231/237 (97%)
Frame = +3
Query: 3 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 182
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 55 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 114
Query: 183 NREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 362
NREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHA
Sbjct: 115 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 174
Query: 363 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASS 542
ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SS
Sbjct: 175 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSS 234
Query: 543 SLEKSYELPDGRVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDV*YQK 713
SLEKSYELPDG+VITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCDV +K
Sbjct: 235 SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRK 291
Score = 58.5 bits (140), Expect = 2e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +1
Query: 703 DIRKDLYANIVLSGGSTMYPGIADRMQKE 789
DIRKDLYAN VLSGG+TMYPGIADRMQKE
Sbjct: 288 DIRKDLYANTVLSGGTTMYPGIADRMQKE 316
>sp|P68143|ACTB_OREMO Actin, cytoplasmic 1 (Beta-actin)
sp|P68142|ACT1_FUGRU Actin, cytoplasmic 1 (Beta-actin-1)
Length = 375
Score = 456 bits (1174), Expect = e-128
Identities = 223/237 (94%), Positives = 231/237 (97%)
Frame = +3
Query: 3 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 182
GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA
Sbjct: 55 GDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKA 114
Query: 183 NREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHA 362
NREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHA
Sbjct: 115 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHA 174
Query: 363 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASS 542
ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SS
Sbjct: 175 ILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSS 234
Query: 543 SLEKSYELPDGRVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDV*YQK 713
SLEKSYELPDG+VITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCDV +K
Sbjct: 235 SLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRK 291
Score = 58.5 bits (140), Expect = 2e-08
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +1
Query: 703 DIRKDLYANIVLSGGSTMYPGIADRMQKE 789
DIRKDLYAN VLSGG+TMYPGIADRMQKE
Sbjct: 288 DIRKDLYANTVLSGGTTMYPGIADRMQKE 316
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,763,014
Number of Sequences: 369166
Number of extensions: 1769289
Number of successful extensions: 5951
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5359
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5829
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7454154400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)