Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_021_P11
(795 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 453 e-127
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 453 e-127
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 452 e-127
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 452 e-127
sp|P30436|TBA_ONCKE Tubulin alpha chain 451 e-127
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 451 e-127
sp|P68368|TBA4_MOUSE Tubulin alpha-4 chain (Alpha-tubulin 4... 450 e-126
sp|P68361|TBA1_CRIGR Tubulin alpha-1 chain (Alpha-tubulin 1... 450 e-126
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 449 e-126
sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain 449 e-126
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 453 bits (1166), Expect = e-127
Identities = 218/264 (82%), Positives = 234/264 (88%)
Frame = +3
Query: 3 LMFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTL 182
L+FH LLMERLSVDYGKKSKLEFA+YPAPQI+TAVVEPYNSILTTHTTL
Sbjct: 136 LIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTL 195
Query: 183 EHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGALNVDLNEF 362
EHSDCAFMVDNEAIYDIC++NL IERPTYT+LNRLIGQIVSSITASLRFDGALNVDL EF
Sbjct: 196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEF 255
Query: 363 QTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPRNGKYMSC 542
QTNLVPYPRIHFPLATYAP+I A++A+HEQL+VAEITN+CFE NQMVKCDPR+GKYMSC
Sbjct: 256 QTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPANQMVKCDPRHGKYMSC 315
Query: 543 CLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDMAKVQRAV 722
C+LYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+AKVQRAV
Sbjct: 316 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 375
Query: 723 CMLSNTTAIAEAWARLDHKFDLMY 794
CMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 376 CMLSNTTAIAEAWARLDHKFDLMY 399
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 453 bits (1165), Expect = e-127
Identities = 217/264 (82%), Positives = 234/264 (88%)
Frame = +3
Query: 3 LMFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTL 182
L+FH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTL
Sbjct: 136 LIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTL 195
Query: 183 EHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGALNVDLNEF 362
EHSDCAFMVDNEAIYDIC++NL IERPTYT+LNRLIGQIVSSITASLRFDGALNVDL EF
Sbjct: 196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEF 255
Query: 363 QTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPRNGKYMSC 542
QTNLVPYPRIHFPLATYAP+I A++A+HEQLSVAEITN+CFE NQMVKCDPR+GKYM+C
Sbjct: 256 QTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMAC 315
Query: 543 CLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDMAKVQRAV 722
C+LYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+AKVQRAV
Sbjct: 316 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 375
Query: 723 CMLSNTTAIAEAWARLDHKFDLMY 794
CMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 376 CMLSNTTAIAEAWARLDHKFDLMY 399
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 452 bits (1164), Expect = e-127
Identities = 217/264 (82%), Positives = 234/264 (88%)
Frame = +3
Query: 3 LMFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTL 182
L+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTHTTL
Sbjct: 136 LVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTL 195
Query: 183 EHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGALNVDLNEF 362
EHSDCAFMVDNEAIYDIC++NL IERPTYT+LNRLIGQIVSSITASLRFDGALNVDL EF
Sbjct: 196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEF 255
Query: 363 QTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPRNGKYMSC 542
QTNLVPYPRIHFPLATYAP+I A++A+HEQLSVAEITN+CFE NQMVKCDPR+GKYM+C
Sbjct: 256 QTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMAC 315
Query: 543 CLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDMAKVQRAV 722
CLLYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+AKVQRAV
Sbjct: 316 CLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 375
Query: 723 CMLSNTTAIAEAWARLDHKFDLMY 794
CMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 376 CMLSNTTAIAEAWARLDHKFDLMY 399
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 452 bits (1163), Expect = e-127
Identities = 218/264 (82%), Positives = 234/264 (88%)
Frame = +3
Query: 3 LMFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTL 182
L+FH LLMERLSVDYGKKSKLEFAVYPAPQI+TAVVEPYNSILTTHTTL
Sbjct: 136 LIFHSFGGGTGSGFSSLLMERLSVDYGKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTL 195
Query: 183 EHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGALNVDLNEF 362
EHSDCAFMVDNEAIYDIC++NL IERPTYT+LNRLIGQIVSSITASLRFDGALNVDL EF
Sbjct: 196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEF 255
Query: 363 QTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPRNGKYMSC 542
QTNLVPYPRIHFPLATYAP+I A++A+HEQL+V+EITN+CFE NQMVKCDPR+GKYM+C
Sbjct: 256 QTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPANQMVKCDPRHGKYMAC 315
Query: 543 CLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDMAKVQRAV 722
CLLYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+AKVQRAV
Sbjct: 316 CLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 375
Query: 723 CMLSNTTAIAEAWARLDHKFDLMY 794
CMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 376 CMLSNTTAIAEAWARLDHKFDLMY 399
>sp|P30436|TBA_ONCKE Tubulin alpha chain
Length = 444
Score = 451 bits (1161), Expect = e-127
Identities = 217/264 (82%), Positives = 234/264 (88%)
Frame = +3
Query: 3 LMFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTL 182
L+FH LLMERLSVDYGKKSKLEFAVYPAPQ++TAVVEPYNSILTTHTTL
Sbjct: 130 LIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAVYPAPQVSTAVVEPYNSILTTHTTL 189
Query: 183 EHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGALNVDLNEF 362
EHSDCAFMVDNEAIYDIC++NL IERP+YT+LNRLIGQIVSSITASLRFDGALNVDL EF
Sbjct: 190 EHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEF 249
Query: 363 QTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPRNGKYMSC 542
QTNLVPYPRIHFPLATYAP+I A++A+HEQLSVA+ITN+CFE NQMVKCDPR+GKYM+C
Sbjct: 250 QTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVADITNACFEPANQMVKCDPRHGKYMAC 309
Query: 543 CLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDMAKVQRAV 722
CLLYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+AKVQRAV
Sbjct: 310 CLLYRGDVVPKDVNSAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 369
Query: 723 CMLSNTTAIAEAWARLDHKFDLMY 794
CMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 370 CMLSNTTAIAEAWARLDHKFDLMY 393
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 451 bits (1161), Expect = e-127
Identities = 216/264 (81%), Positives = 233/264 (88%)
Frame = +3
Query: 3 LMFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTL 182
L+FH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTL
Sbjct: 136 LIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTL 195
Query: 183 EHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGALNVDLNEF 362
EHSDCAFMVDNEAIYDIC++NL IERPTYT+LNRLIGQIVSSITASLRFDGALNVDL EF
Sbjct: 196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEF 255
Query: 363 QTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPRNGKYMSC 542
QTNLVPYPRIHFPL TYAP+I A++A+HEQLSVAEITN+CFE NQMVKCDPR+GKYM+C
Sbjct: 256 QTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMAC 315
Query: 543 CLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDMAKVQRAV 722
C+LYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+AKVQRAV
Sbjct: 316 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 375
Query: 723 CMLSNTTAIAEAWARLDHKFDLMY 794
CMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 376 CMLSNTTAIAEAWARLDHKFDLMY 399
>sp|P68368|TBA4_MOUSE Tubulin alpha-4 chain (Alpha-tubulin 4) (Alpha-tubulin isotype
M-alpha-4)
sp|P68367|TBA1_MACFA Tubulin alpha-1 chain (Alpha-tubulin 1) (Testis-specific
alpha-tubulin)
sp|P68366|TBA1_HUMAN Tubulin alpha-1 chain (Alpha-tubulin 1) (Testis-specific
alpha-tubulin) (Tubulin H2-alpha)
Length = 448
Score = 450 bits (1158), Expect = e-126
Identities = 216/264 (81%), Positives = 233/264 (88%)
Frame = +3
Query: 3 LMFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTL 182
L+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTHTTL
Sbjct: 136 LVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTL 195
Query: 183 EHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGALNVDLNEF 362
EHSDCAFMVDNEAIYDIC++NL IERPTYT+LNRLI QIVSSITASLRFDGALNVDL EF
Sbjct: 196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEF 255
Query: 363 QTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPRNGKYMSC 542
QTNLVPYPRIHFPLATYAP+I A++A+HEQLSVAEITN+CFE NQMVKCDPR+GKYM+C
Sbjct: 256 QTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMAC 315
Query: 543 CLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDMAKVQRAV 722
CLLYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+AKVQRAV
Sbjct: 316 CLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 375
Query: 723 CMLSNTTAIAEAWARLDHKFDLMY 794
CMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 376 CMLSNTTAIAEAWARLDHKFDLMY 399
>sp|P68361|TBA1_CRIGR Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin I)
sp|P68363|TBAK_HUMAN Tubulin alpha-ubiquitous chain (Alpha-tubulin ubiquitous) (Tubulin
K-alpha-1)
sp|P05213|TBA2_MOUSE Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin isotype
M-alpha-2)
sp|P68360|TBA1_MERUN Tubulin alpha-1 chain (Alpha-tubulin 1)
sp|Q6P9V9|TBA2_RAT Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 451
Score = 450 bits (1158), Expect = e-126
Identities = 216/264 (81%), Positives = 233/264 (88%)
Frame = +3
Query: 3 LMFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTL 182
L+FH LLMERLSVDYGKKSKLEF++YPAPQ++TAVVEPYNSILTTHTTL
Sbjct: 136 LVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTL 195
Query: 183 EHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGALNVDLNEF 362
EHSDCAFMVDNEAIYDIC++NL IERPTYT+LNRLI QIVSSITASLRFDGALNVDL EF
Sbjct: 196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITASLRFDGALNVDLTEF 255
Query: 363 QTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPRNGKYMSC 542
QTNLVPYPRIHFPLATYAP+I A++A+HEQLSVAEITN+CFE NQMVKCDPR+GKYM+C
Sbjct: 256 QTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMAC 315
Query: 543 CLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDMAKVQRAV 722
CLLYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+AKVQRAV
Sbjct: 316 CLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 375
Query: 723 CMLSNTTAIAEAWARLDHKFDLMY 794
CMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 376 CMLSNTTAIAEAWARLDHKFDLMY 399
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 449 bits (1156), Expect = e-126
Identities = 215/264 (81%), Positives = 232/264 (87%)
Frame = +3
Query: 3 LMFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTL 182
L+FH LLMERLSVDYGKKSKLEFA+YPAPQ++TAVVEPYNSILTTHTTL
Sbjct: 136 LIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTL 195
Query: 183 EHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGALNVDLNEF 362
EHSDCAFMVDNEAIYDIC++NL IERPTYT+LNRLIGQIVSSITASLRFDGALNVDL EF
Sbjct: 196 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEF 255
Query: 363 QTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPRNGKYMSC 542
QTNLVPYPRIHFPL TYAP+I A++A+HE LSVAEITN+CFE NQMVKCDPR+GKYM+C
Sbjct: 256 QTNLVPYPRIHFPLVTYAPVISAEKAYHEMLSVAEITNACFEPANQMVKCDPRHGKYMAC 315
Query: 543 CLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDMAKVQRAV 722
C+LYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+AKVQRAV
Sbjct: 316 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 375
Query: 723 CMLSNTTAIAEAWARLDHKFDLMY 794
CMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 376 CMLSNTTAIAEAWARLDHKFDLMY 399
>sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain
Length = 451
Score = 449 bits (1156), Expect = e-126
Identities = 215/264 (81%), Positives = 234/264 (88%)
Frame = +3
Query: 3 LMFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAVYPAPQIATAVVEPYNSILTTHTTL 182
L+FH LLMERLSVDYGKKSKLEF+VYPAPQ++TAVVEPYNSILTTHTTL
Sbjct: 136 LIFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSVYPAPQVSTAVVEPYNSILTTHTTL 195
Query: 183 EHSDCAFMVDNEAIYDICKKNLGIERPTYTSLNRLIGQIVSSITASLRFDGALNVDLNEF 362
EHSDCAFMVDNEAIYDIC++NL IERP+YT+LNRLIGQIVSSITASLRFDGALNVDL EF
Sbjct: 196 EHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLIGQIVSSITASLRFDGALNVDLTEF 255
Query: 363 QTNLVPYPRIHFPLATYAPIICADRAFHEQLSVAEITNSCFEHNNQMVKCDPRNGKYMSC 542
QTNLVPYPRIHFPLATYAP+I A++A+HEQLSVAEITN+CFE NQ+VKCDPR+GKYM+C
Sbjct: 256 QTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPANQLVKCDPRHGKYMAC 315
Query: 543 CLLYRGDVVPKDVXXXXXXXXXXXXXQFVDWCPTGFKVGINYQPPTVIPGGDMAKVQRAV 722
C+LYRGDVVPKDV QFVDWCPTGFKVGINYQPPTV+PGGD+AKVQRAV
Sbjct: 316 CMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAV 375
Query: 723 CMLSNTTAIAEAWARLDHKFDLMY 794
CMLSNTTAIAEAWARLDHKFDLMY
Sbjct: 376 CMLSNTTAIAEAWARLDHKFDLMY 399
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,736,863
Number of Sequences: 369166
Number of extensions: 1802219
Number of successful extensions: 4450
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4367
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7473924075
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)