Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_021_O07
(830 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9WVD5|ORNT1_MOUSE Mitochondrial ornithine transporter 1... 180 4e-45
sp|Q9Y619|ORNT1_HUMAN Mitochondrial ornithine transporter 1... 179 1e-44
sp|Q9BXI2|ORNT2_HUMAN Mitochondrial ornithine transporter 2... 176 5e-44
sp|Q93XM7|MCAT_ARATH Mitochondrial carnitine/acylcarnitine ... 110 4e-24
sp|Q01356|ARG13_NEUCR Amino acid transporter arg-13 99 2e-20
sp|Q10248|YD1K_SCHPO Putative mitochondrial carrier C4G9.20c 98 3e-20
sp|Q27257|DIF1_CAEEL Protein dif-1 96 9e-20
sp|Q9Z2Z6|MCAT_MOUSE Mitochondrial carnitine/acylcarnitine ... 95 2e-19
sp|Q8HXY2|MCAT_MACFA Mitochondrial carnitine/acylcarnitine ... 95 2e-19
sp|P97521|MCAT_RAT Mitochondrial carnitine/acylcarnitine ca... 92 2e-18
>sp|Q9WVD5|ORNT1_MOUSE Mitochondrial ornithine transporter 1 (Solute carrier family 25
member 15)
Length = 301
Score = 180 bits (457), Expect = 4e-45
Identities = 99/231 (42%), Positives = 132/231 (57%), Gaps = 1/231 (0%)
Frame = +2
Query: 65 IGFLCGVNGGIATVYVGQPLDTVKVKMQMFPALYKNAFTCFMNTLKKDGIYRGLYAGTVP 244
I G GG A V GQP DT+KVKMQ FP LY+ C + T + G +RG Y GT P
Sbjct: 11 IDLTAGAAGGTACVLTGQPFDTMKVKMQTFPDLYRGLTDCCLKTYSQVG-FRGFYKGTSP 69
Query: 245 ALVANVAENSVLFCALPPCKSLVSVILNKPVK-ELNPLESGCAGGIAAIFSSLTLCPTEL 421
AL+AN+AENSVLF C+ +V ++ + +L+ L++ AG A+ F++L LCPTEL
Sbjct: 70 ALIANIAENSVLFMCYGFCQQVVRKVVGLDQQAKLSDLQNAAAGSFASAFAALVLCPTEL 129
Query: 422 VKCKQQAMREMIEAGKSSMKITDTGPWKICKQVFSSQGFRGFFHGLVPTFAREVPGYFCF 601
VKC+ Q M EM +GK + + W + K++F G GF+HGL T REVPGYF F
Sbjct: 130 VKCRLQTMYEMETSGK--IAASQNTVWSVVKEIFRKDGPLGFYHGLSSTLLREVPGYFFF 187
Query: 602 FGAYELGQYSFARWGSNEIRSKCDLTVFETGICGAAAGTTLWTVIFPFDVV 754
FG YEL + FA RSK +L + G G LW ++P D +
Sbjct: 188 FGGYELSRSFFASG-----RSKDELGPVPLMLSGGFGGICLWLAVYPVDCI 233
Score = 38.9 bits (89), Expect = 0.018
Identities = 43/175 (24%), Positives = 65/175 (37%), Gaps = 9/175 (5%)
Frame = +2
Query: 119 PLDTVKVKMQ-MFPALYKNAFTCFMNTL--------KKDGIYRGLYAGTVPALVANVAEN 271
P + VK ++Q M+ NT+ +KDG G Y G L+ V
Sbjct: 126 PTELVKCRLQTMYEMETSGKIAASQNTVWSVVKEIFRKDGPL-GFYHGLSSTLLREVPGY 184
Query: 272 SVLFCALPPCKSLVSVILNKPVKELNPLESGCAGGIAAIFSSLTLCPTELVKCKQQAMRE 451
F +S + +K EL P+ +GG I L + P + +K + Q +
Sbjct: 185 FFFFGGYELSRSFFASGRSKD--ELGPVPLMLSGGFGGICLWLAVYPVDCIKSRIQVL-- 240
Query: 452 MIEAGKSSMKITDTGPWKICKQVFSSQGFRGFFHGLVPTFAREVPGYFCFFGAYE 616
SM TG + + ++G + GL PT R P F AYE
Sbjct: 241 -------SMTGKQTGLVRTFLSIVKNEGITALYSGLKPTMIRAFPANGALFLAYE 288
>sp|Q9Y619|ORNT1_HUMAN Mitochondrial ornithine transporter 1 (Solute carrier family 25,
member 15)
Length = 301
Score = 179 bits (453), Expect = 1e-44
Identities = 101/232 (43%), Positives = 131/232 (56%), Gaps = 2/232 (0%)
Frame = +2
Query: 65 IGFLCGVNGGIATVYVGQPLDTVKVKMQMFPALYKNAFTCFMNTLKKDGIYRGLYAGTVP 244
I G GG A V GQP DT+KVKMQ FP LY+ C + T + G +RG Y GT P
Sbjct: 11 IDLTAGAAGGTACVLTGQPFDTMKVKMQTFPDLYRGLTDCCLKTYSQVG-FRGFYKGTSP 69
Query: 245 ALVANVAENSVLFCALPPCKSLVSVI--LNKPVKELNPLESGCAGGIAAIFSSLTLCPTE 418
AL+AN+AENSVLF C+ +V + L+K K L+ L++ AG A+ F++L LCPTE
Sbjct: 70 ALIANIAENSVLFMCYGFCQQVVRKVAGLDKQAK-LSDLQNAAAGSFASAFAALVLCPTE 128
Query: 419 LVKCKQQAMREMIEAGKSSMKITDTGPWKICKQVFSSQGFRGFFHGLVPTFAREVPGYFC 598
LVKC+ Q M EM +GK + + W + K + G GF+HGL T REVPGYF
Sbjct: 129 LVKCRLQTMYEMETSGKIAK--SQNTVWSVIKSILRKDGPLGFYHGLSSTLLREVPGYFF 186
Query: 599 FFGAYELGQYSFARWGSNEIRSKCDLTVFETGICGAAAGTTLWTVIFPFDVV 754
FFG YEL + FA RSK +L + G G LW ++P D +
Sbjct: 187 FFGGYELSRSFFASG-----RSKDELGPVPLMLSGGVGGICLWLAVYPVDCI 233
Score = 38.5 bits (88), Expect = 0.023
Identities = 37/140 (26%), Positives = 54/140 (38%)
Frame = +2
Query: 197 LKKDGIYRGLYAGTVPALVANVAENSVLFCALPPCKSLVSVILNKPVKELNPLESGCAGG 376
L+KDG G Y G L+ V F +S + +K EL P+ +GG
Sbjct: 161 LRKDGPL-GFYHGLSSTLLREVPGYFFFFGGYELSRSFFASGRSKD--ELGPVPLMLSGG 217
Query: 377 IAAIFSSLTLCPTELVKCKQQAMREMIEAGKSSMKITDTGPWKICKQVFSSQGFRGFFHG 556
+ I L + P + +K + Q + SM G + V ++G + G
Sbjct: 218 VGGICLWLAVYPVDCIKSRIQVL---------SMSGKQAGFIRTFINVVKNEGITALYSG 268
Query: 557 LVPTFAREVPGYFCFFGAYE 616
L PT R P F AYE
Sbjct: 269 LKPTMIRAFPANGALFLAYE 288
>sp|Q9BXI2|ORNT2_HUMAN Mitochondrial ornithine transporter 2 (Solute carrier family 25
member 2)
Length = 301
Score = 176 bits (447), Expect = 5e-44
Identities = 102/232 (43%), Positives = 131/232 (56%), Gaps = 2/232 (0%)
Frame = +2
Query: 65 IGFLCGVNGGIATVYVGQPLDTVKVKMQMFPALYKNAFTCFMNTLKKDGIYRGLYAGTVP 244
I G GG A V GQP DT+KVKMQ FP LYK CF+ T + G+ RG Y GT P
Sbjct: 11 IDLTAGAAGGTACVLTGQPFDTIKVKMQTFPDLYKGLTDCFLKTYAQVGL-RGFYKGTGP 69
Query: 245 ALVANVAENSVLFCALPPCKSLVSVI--LNKPVKELNPLESGCAGGIAAIFSSLTLCPTE 418
AL+A VAENSVLF C+ V + ++K K L+ L++ AG A+ F++L LCPTE
Sbjct: 70 ALMAYVAENSVLFMCYGFCQQFVRKVAGMDKQAK-LSDLQTAAAGSFASAFAALALCPTE 128
Query: 419 LVKCKQQAMREMIEAGKSSMKITDTGPWKICKQVFSSQGFRGFFHGLVPTFAREVPGYFC 598
LVKC+ Q M EM +GK + + W + K + G GF+HGL T +E PGYF
Sbjct: 129 LVKCRLQTMYEMEMSGKIAK--SHNTIWSVVKGILKKDGPLGFYHGLSSTLLQEGPGYFF 186
Query: 599 FFGAYELGQYSFARWGSNEIRSKCDLTVFETGICGAAAGTTLWTVIFPFDVV 754
FFG YEL + FA RSK +L + G AG LW ++FP D +
Sbjct: 187 FFGGYELSRSFFASG-----RSKDELGPVHLMLSGGVAGICLWLIVFPVDCI 233
>sp|Q93XM7|MCAT_ARATH Mitochondrial carnitine/acylcarnitine carrier-like protein (A BOUT
DE SOUFFLE) (Carnitine/acylcarnitine translocase-like
protein) (CAC-like protein)
Length = 300
Score = 110 bits (276), Expect = 4e-24
Identities = 78/236 (33%), Positives = 105/236 (44%), Gaps = 11/236 (4%)
Frame = +2
Query: 80 GVNGGIATVYVGQPLDTVKVKMQMFPA-------LYKNAFTCFMNTLKKDGIYRGLYAGT 238
G GG A + VG P DT+KVK+Q P Y A T+ +G +GLY G
Sbjct: 11 GTVGGAAQLVVGHPFDTIKVKLQSQPTPAPGQLPRYTGAIDAVKQTVASEGT-KGLYKGM 69
Query: 239 VPALVANVAENSVLFCALPPCKSLVSVILNKPVKELNPLESGCAGGIAAIFSSLTLCPTE 418
L A N+VLF + L+ P+ +G G A F + CPTE
Sbjct: 70 GAPLATVAAFNAVLFTVRGQMEGLLRSEAGVPLTISQQFVAGAGAGFAVSFLA---CPTE 126
Query: 419 LVKCKQQAMREMIEAGKSSMKITDT---GPWKICKQVFSSQG-FRGFFHGLVPTFAREVP 586
L+KC+ QA + A +S + GP + + V S+G RG F GL PTFAREVP
Sbjct: 127 LIKCRLQAQGALAGASTTSSVVAAVKYGGPMDVARHVLRSEGGARGLFKGLFPTFAREVP 186
Query: 587 GYFCFFGAYELGQYSFARWGSNEIRSKCDLTVFETGICGAAAGTTLWTVIFPFDVV 754
G F AYE + A + L + G AG + W +++P DVV
Sbjct: 187 GNATMFAAYEAFKRFLAGGSDTSSLGQGSLI-----MAGGVAGASFWGIVYPTDVV 237
Score = 56.6 bits (135), Expect = 8e-08
Identities = 49/201 (24%), Positives = 79/201 (39%), Gaps = 14/201 (6%)
Frame = +2
Query: 71 FLCGVNGGIATVYVGQPLDTVKVKMQMFPAL--------------YKNAFTCFMNTLKKD 208
F+ G G A ++ P + +K ++Q AL Y + L+ +
Sbjct: 108 FVAGAGAGFAVSFLACPTELIKCRLQAQGALAGASTTSSVVAAVKYGGPMDVARHVLRSE 167
Query: 209 GIYRGLYAGTVPALVANVAENSVLFCALPPCKSLVSVILNKPVKELNPLESGCAGGIAAI 388
G RGL+ G P V N+ +F A K ++ L AGG+A
Sbjct: 168 GGARGLFKGLFPTFAREVPGNATMFAAYEAFKRFLAG--GSDTSSLGQGSLIMAGGVAGA 225
Query: 389 FSSLTLCPTELVKCKQQAMREMIEAGKSSMKITDTGPWKICKQVFSSQGFRGFFHGLVPT 568
+ PT++VK Q ++ K+ TG +++ S+G +G + G P
Sbjct: 226 SFWGIVYPTDVVKSVLQ-----VDDYKNPRY---TGSMDAFRKILKSEGVKGLYKGFGPA 277
Query: 569 FAREVPGYFCFFGAYELGQYS 631
AR VP F AYE+ + S
Sbjct: 278 MARSVPANAACFLAYEMTRSS 298
>sp|Q01356|ARG13_NEUCR Amino acid transporter arg-13
Length = 363
Score = 98.6 bits (244), Expect = 2e-20
Identities = 80/246 (32%), Positives = 112/246 (45%), Gaps = 21/246 (8%)
Frame = +2
Query: 80 GVNGGIATVYVGQPLDTVKVKMQM----FPALYKNAFTCFMNTLKKDGIYRGLYAGTVPA 247
G GI Y+ P DTVKV++Q P Y CF +++ DG + GLY G
Sbjct: 49 GSAAGIVGKYIEYPFDTVKVRLQSQPDHLPLRYTGPLDCFRQSIRADG-FLGLYRGISAP 107
Query: 248 LVANVAENSVLFCALPPCKSLVSVILNKPV-KELNPLESGCAGGIAAIFSSLTLCPTELV 424
LV ENS LF +SL+ P EL+ GG + F+SL L P ELV
Sbjct: 108 LVGAALENSSLFFFERIGRSLLYSSGFAPRDSELSLSALWFTGGFSGAFTSLILTPVELV 167
Query: 425 KCKQQAMREMIEAGKSSMKITDTGPWKICKQVFSSQGFRGFFHGLVPTFAREVPGYFCFF 604
KCK Q E AG ++ P + K++F +G RGF+HG + T RE G +F
Sbjct: 168 KCKIQVPDEPGGAGARQRQLK---PIPVIKEIFRHEGLRGFWHGQLGTLIREAGGCAAWF 224
Query: 605 GAYELGQYSFARW--GSNE--------------IRSKCDLTVFETGICGAAAGTTLWTVI 736
G+ E + ++W G NE + L +++ I GA+AG + +
Sbjct: 225 GSKE----TTSKWFRGRNERALLKRGASQEEVVASRERPLPLWQQAIAGASAGMSYNFLF 280
Query: 737 FPFDVV 754
FP D V
Sbjct: 281 FPADTV 286
>sp|Q10248|YD1K_SCHPO Putative mitochondrial carrier C4G9.20c
Length = 302
Score = 97.8 bits (242), Expect = 3e-20
Identities = 76/232 (32%), Positives = 108/232 (46%), Gaps = 4/232 (1%)
Frame = +2
Query: 71 FLCGVNGGIATVYVGQPLDTVKVKMQM---FPALYKNAFTCFMNTLKKDGIYRGLYAGTV 241
FL GV+GG+A V VGQP D VKV++Q +Y NA C K +G+ Y GTV
Sbjct: 21 FLAGVSGGVAQVLVGQPFDCVKVRLQSQSNVSPIYNNALDCVKKISKNEGL-AAFYKGTV 79
Query: 242 PALVANVAENSVLFCALPPCKSLVSVILNKPVKELNPLESGCAGGIAAIFSSLTLCPTEL 421
L+ S+ F CK S PV SG G+A +S + P E
Sbjct: 80 LPLLGIGFCVSIQFTTFEYCKRFFSRD-GTPVTMPQYYVSGAISGLA---NSFLVGPVEH 135
Query: 422 VKCKQQAMREMIEAGKSSMKITDTGPWKICKQVFSSQGFRGFFHGLVPTFAREVPGYFCF 601
V+ + Q I+ GK+ + GPW K++ S G G G PT ARE G +
Sbjct: 136 VRIRLQ-----IQTGKN---VLYHGPWDCIKKISSQYGLSGIMKGYNPTAAREAHGLGMY 187
Query: 602 FGAYE-LGQYSFARWGSNEIRSKCDLTVFETGICGAAAGTTLWTVIFPFDVV 754
F AYE L + + A+ + + + ++ + GA AG +W +PFD+V
Sbjct: 188 FLAYEALVKNTMAK---HHLTDRSQTPGWKLCVFGAGAGYAMWLAAYPFDIV 236
Score = 47.4 bits (111), Expect = 5e-05
Identities = 41/186 (22%), Positives = 70/186 (37%), Gaps = 4/186 (2%)
Frame = +2
Query: 71 FLCGVNGGIATVYVGQPLDTVKVKMQMFPA---LYKNAFTCFMNTLKKDGIYRGLYAGTV 241
++ G G+A ++ P++ V++++Q+ LY + C + G+ G+ G
Sbjct: 116 YVSGAISGLANSFLVGPVEHVRIRLQIQTGKNVLYHGPWDCIKKISSQYGL-SGIMKGYN 174
Query: 242 PALVANVAENSVLFCALPPCKSLVSVILNKPVKELNPLESGCAGGIAAIFSS-LTLCPTE 418
P + F A + + P C G A ++ L P +
Sbjct: 175 PTAAREAHGLGMYFLAYEALVKNTMAKHHLTDRSQTPGWKLCVFGAGAGYAMWLAAYPFD 234
Query: 419 LVKCKQQAMREMIEAGKSSMKITDTGPWKICKQVFSSQGFRGFFHGLVPTFAREVPGYFC 598
+VK K I+ K T W+ K +++ G RGF+ G VP R P
Sbjct: 235 IVKSK-------IQTDGFLSKATYKNSWQCAKGIYTKAGLRGFYRGFVPVLVRAAPANAV 287
Query: 599 FFGAYE 616
F YE
Sbjct: 288 TFYVYE 293
>sp|Q27257|DIF1_CAEEL Protein dif-1
Length = 312
Score = 96.3 bits (238), Expect = 9e-20
Identities = 66/240 (27%), Positives = 106/240 (44%), Gaps = 7/240 (2%)
Frame = +2
Query: 56 DMIIGFLCGVNGGIATVYVGQPLDTVKVKMQMFP-------ALYKNAFTCFMNTLKKDGI 214
D+++ F+ G GG TV VG P DTVKV++Q P + A C T+ K+G
Sbjct: 3 DVLLNFIAGGVGGSCTVIVGHPFDTVKVRIQTMPMPKPGEKPQFTGALDCVKRTVSKEGF 62
Query: 215 YRGLYAGTVPALVANVAENSVLFCALPPCKSLVSVILNKPVKELNPLESGCAGGIAAIFS 394
+ LY G LV +V F K L P +E+ +++ AG +A +F+
Sbjct: 63 F-ALYKGMAAPLVGVSPLFAVFFGGCAVGKWLQQ---TDPSQEMTFIQNANAGALAGVFT 118
Query: 395 SLTLCPTELVKCKQQAMREMIEAGKSSMKITDTGPWKICKQVFSSQGFRGFFHGLVPTFA 574
++ + P E +KC Q +AG + + GP + K+++ G + G T
Sbjct: 119 TIVMVPGERIKCLLQVQ----QAGSAGSGVHYDGPLDVVKKLYKQGGISSIYRGTGATLL 174
Query: 575 REVPGYFCFFGAYELGQYSFARWGSNEIRSKCDLTVFETGICGAAAGTTLWTVIFPFDVV 754
R++P + YE + F+ G+ L+ T + G AG W V P DV+
Sbjct: 175 RDIPASAAYLSVYEYLKKKFSGEGAQR-----TLSPGATLMAGGLAGIANWGVCIPADVL 229
Score = 36.6 bits (83), Expect = 0.087
Identities = 47/196 (23%), Positives = 77/196 (39%), Gaps = 7/196 (3%)
Frame = +2
Query: 80 GVNGGIATVYVGQPLDTVKVKMQMFPA------LYKNAFTCFMNTLKKDGIYRGLYAGTV 241
G G+ T V P + +K +Q+ A ++ + + L K G +Y GT
Sbjct: 111 GALAGVFTTIVMVPGERIKCLLQVQQAGSAGSGVHYDGPLDVVKKLYKQGGISSIYRGTG 170
Query: 242 PALVANVAENSVLFCALPPCKSLVSVILNKPVKELNPLESGCAGGIAAIFSSLTLCPTEL 421
L+ ++ ++ K S + L+P + AGG+A I + P ++
Sbjct: 171 ATLLRDIPASAAYLSVYEYLKKKFSG--EGAQRTLSPGATLMAGGLAGIANWGVCIPADV 228
Query: 422 VKCKQQAMREMIEAGKSSMKITDTGPWKICKQVFSSQGFRGFFHGLVPTFAREVP-GYFC 598
+K + Q E GK G + ++V +G R F G P R P C
Sbjct: 229 LKSRLQTAPE----GK-----YPDGIRGVLREVLREEGPRALFKGFWPVMLRAFPANAAC 279
Query: 599 FFGAYELGQYSFARWG 646
FFG EL +F +G
Sbjct: 280 FFG-LELTLAAFRYFG 294
>sp|Q9Z2Z6|MCAT_MOUSE Mitochondrial carnitine/acylcarnitine carrier protein
(Carnitine/acylcarnitine translocase) (CAC) (mCAC)
Length = 301
Score = 95.1 bits (235), Expect = 2e-19
Identities = 74/234 (31%), Positives = 106/234 (45%), Gaps = 7/234 (2%)
Frame = +2
Query: 74 LCGVNGGIATVYVGQPLDTVKVKMQMFPA-------LYKNAFTCFMNTLKKDGIYRGLYA 232
L G GG+ V+VG PLDTVKV++Q P +Y CF TL ++GI GLY
Sbjct: 15 LAGGFGGMCLVFVGHPLDTVKVRLQTQPPSLSGQPPMYSGTLDCFRKTLMREGI-TGLYR 73
Query: 233 GTVPALVANVAENSVLFCALPPCKSLVSVILNKPVKELNPLESGCAGGIAAIFSSLTLCP 412
G ++ +V F K L P EL+ + AG ++ +F++ + P
Sbjct: 74 GMAAPIIGVTPMFAVCFFGFGLGKKLQQ---KSPEDELSYPQLFTAGMLSGVFTTGIMTP 130
Query: 413 TELVKCKQQAMREMIEAGKSSMKITDTGPWKICKQVFSSQGFRGFFHGLVPTFAREVPGY 592
E +KC Q I+A K +G K+++ G RGF+ G V T R+VP
Sbjct: 131 GERIKCLLQ-----IQASSGENKY--SGTLDCAKKLYQEFGIRGFYKGTVLTLMRDVPAS 183
Query: 593 FCFFGAYELGQYSFARWGSNEIRSKCDLTVFETGICGAAAGTTLWTVIFPFDVV 754
+F YE + F G +S DL+V + G AG W V P DV+
Sbjct: 184 GMYFMTYEWLKNLFTPEG----KSVSDLSVPRILVAGGFAGIFNWAVAIPPDVL 233
>sp|Q8HXY2|MCAT_MACFA Mitochondrial carnitine/acylcarnitine carrier protein
(Carnitine/acylcarnitine translocase) (CAC)
Length = 301
Score = 95.1 bits (235), Expect = 2e-19
Identities = 72/234 (30%), Positives = 106/234 (45%), Gaps = 7/234 (2%)
Frame = +2
Query: 74 LCGVNGGIATVYVGQPLDTVKVKMQM-------FPALYKNAFTCFMNTLKKDGIYRGLYA 232
L G GG+ V+VG PLDTVKV++Q P +Y F CF TL ++GI RGLY
Sbjct: 15 LAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTFDCFRKTLFREGI-RGLYR 73
Query: 233 GTVPALVANVAENSVLFCALPPCKSLVSVILNKPVKELNPLESGCAGGIAAIFSSLTLCP 412
G ++ +V F K L P L+ + AG ++ IF++ + P
Sbjct: 74 GMAAPIIGVTPMFAVCFFGFGLGKKLQQ---KHPEDVLSYPQLFAAGMLSGIFTTGIMTP 130
Query: 413 TELVKCKQQAMREMIEAGKSSMKITDTGPWKICKQVFSSQGFRGFFHGLVPTFAREVPGY 592
E +KC +++ SS + TG K+++ G RG + G V T R+VP
Sbjct: 131 GERIKC-------LLQIQASSGETKYTGTLDCAKKLYQEFGIRGIYKGTVVTLMRDVPAS 183
Query: 593 FCFFGAYELGQYSFARWGSNEIRSKCDLTVFETGICGAAAGTTLWTVIFPFDVV 754
+F YE + F G + +L+V + G AG W V P DV+
Sbjct: 184 GMYFMTYEWVKNIFTPEG----KRVSELSVPRVLVAGGIAGIFNWAVAIPPDVL 233
Score = 31.2 bits (69), Expect = 3.7
Identities = 24/94 (25%), Positives = 40/94 (42%), Gaps = 1/94 (1%)
Frame = +2
Query: 329 KPVKELNPLESGCAGGIAAIFSSLTLCPTELVKCKQQAMREMIEAGKSSMKITDTGPWKI 508
KP+ L L +G GG+ +F P + VK + Q + G+ M +G +
Sbjct: 6 KPISPLKNLLAGGFGGVCLVFVG---HPLDTVKVRLQTQPPSL-PGQPPMY---SGTFDC 58
Query: 509 CKQVFSSQGFRGFFHGLVPTFAREVPGY-FCFFG 607
++ +G RG + G+ P + CFFG
Sbjct: 59 FRKTLFREGIRGLYRGMAAPIIGVTPMFAVCFFG 92
>sp|P97521|MCAT_RAT Mitochondrial carnitine/acylcarnitine carrier protein
(Carnitine/acylcarnitine translocase) (CAC)
Length = 301
Score = 92.0 bits (227), Expect = 2e-18
Identities = 71/234 (30%), Positives = 104/234 (44%), Gaps = 7/234 (2%)
Frame = +2
Query: 74 LCGVNGGIATVYVGQPLDTVKVKMQM-------FPALYKNAFTCFMNTLKKDGIYRGLYA 232
L G GG+ V+VG PLDTVKV++Q P +Y CF TL ++GI GLY
Sbjct: 15 LAGGFGGVCLVFVGHPLDTVKVRLQTQPPSLPGQPPMYSGTIDCFRKTLFREGI-TGLYR 73
Query: 233 GTVPALVANVAENSVLFCALPPCKSLVSVILNKPVKELNPLESGCAGGIAAIFSSLTLCP 412
G ++ +V F K L P EL + AG ++ +F++ + P
Sbjct: 74 GMAAPIIGVTPMFAVCFFGFGLGKRLQQ---KSPEDELTYPQLFTAGMLSGVFTTGIMTP 130
Query: 413 TELVKCKQQAMREMIEAGKSSMKITDTGPWKICKQVFSSQGFRGFFHGLVPTFAREVPGY 592
E +KC +++ SS K +G K+++ G RGF+ G T R+VP
Sbjct: 131 GERIKC-------LLQIQASSGKNKYSGTLDCAKKLYQEFGIRGFYKGTALTLMRDVPAS 183
Query: 593 FCFFGAYELGQYSFARWGSNEIRSKCDLTVFETGICGAAAGTTLWTVIFPFDVV 754
+F YE + F G +S DL+V + G G W V P DV+
Sbjct: 184 GMYFMTYEWLKNLFTPQG----KSVHDLSVPRVLVAGGFRGIFNWVVAIPPDVL 233
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,962,970
Number of Sequences: 369166
Number of extensions: 2157018
Number of successful extensions: 6136
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5983
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8052550455
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)