Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_021_N23
(881 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 471 e-133
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 471 e-133
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 471 e-133
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 470 e-132
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 468 e-131
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 466 e-131
sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (... 459 e-129
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 458 e-129
sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70) 456 e-128
sp|P08107|HSP71_HUMAN Heat shock 70 kDa protein 1 (HSP70.1)... 455 e-128
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 471 bits (1213), Expect = e-133
Identities = 245/293 (83%), Positives = 249/293 (84%)
Frame = +1
Query: 1 GSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKH 180
G+ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKH
Sbjct: 190 GAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKH 249
Query: 181 KKDISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADL 360
KKDIS+NKRAVRRLRTACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADL
Sbjct: 250 KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADL 309
Query: 361 FRSTLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXX 540
FR TL+PVEKALRDAKLDK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 310 FRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAV 369
Query: 541 XXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXX 720
ILSGDKSE VQD GIETAGGVMT LIKRN
Sbjct: 370 AYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFT 429
Query: 721 XYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 879
YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDA
Sbjct: 430 TYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDA 482
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 471 bits (1213), Expect = e-133
Identities = 245/293 (83%), Positives = 249/293 (84%)
Frame = +1
Query: 1 GSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKH 180
G+ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKH
Sbjct: 190 GAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKH 249
Query: 181 KKDISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADL 360
KKDIS+NKRAVRRLRTACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADL
Sbjct: 250 KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADL 309
Query: 361 FRSTLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXX 540
FR TL+PVEKALRDAKLDK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 310 FRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAV 369
Query: 541 XXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXX 720
ILSGDKSE VQD GIETAGGVMT LIKRN
Sbjct: 370 AYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFT 429
Query: 721 XYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 879
YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDA
Sbjct: 430 TYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDA 482
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 471 bits (1213), Expect = e-133
Identities = 245/293 (83%), Positives = 249/293 (84%)
Frame = +1
Query: 1 GSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKH 180
G+ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKH
Sbjct: 190 GAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKH 249
Query: 181 KKDISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADL 360
KKDIS+NKRAVRRLRTACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADL
Sbjct: 250 KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADL 309
Query: 361 FRSTLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXX 540
FR TL+PVEKALRDAKLDK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 310 FRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAV 369
Query: 541 XXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXX 720
ILSGDKSE VQD GIETAGGVMT LIKRN
Sbjct: 370 AYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFT 429
Query: 721 XYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 879
YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDA
Sbjct: 430 TYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDA 482
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 470 bits (1209), Expect = e-132
Identities = 244/293 (83%), Positives = 249/293 (84%)
Frame = +1
Query: 1 GSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKH 180
G+ERNVLIFDLGGG+FDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRKH
Sbjct: 190 GAERNVLIFDLGGGSFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFITEFKRKH 249
Query: 181 KKDISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADL 360
KKDISDNKRAVRRLRTACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADL
Sbjct: 250 KKDISDNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADL 309
Query: 361 FRSTLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXX 540
FR TL+PVEKALRDAK+DK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 310 FRGTLDPVEKALRDAKMDKAQIHDIVLVGGSTRIPKIQKLLQDYFNGKELNKSINPDEAV 369
Query: 541 XXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXX 720
ILSGDKSE VQD GIETAGGVMT LIKRN
Sbjct: 370 AYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFT 429
Query: 721 XYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 879
YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDA
Sbjct: 430 TYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDA 482
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 468 bits (1204), Expect = e-131
Identities = 242/293 (82%), Positives = 249/293 (84%)
Frame = +1
Query: 1 GSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKH 180
G+ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKRK+
Sbjct: 190 GAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKY 249
Query: 181 KKDISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADL 360
KKDISDNKRAVRRLRTACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADL
Sbjct: 250 KKDISDNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADL 309
Query: 361 FRSTLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXX 540
FR TL+PVEK+LRDAK+DK +HDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 310 FRGTLDPVEKSLRDAKMDKAQVHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAV 369
Query: 541 XXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXX 720
ILSGDKSE VQD GIETAGGVMT LIKRN
Sbjct: 370 AYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFT 429
Query: 721 XYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 879
YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDA
Sbjct: 430 TYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDA 482
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 466 bits (1199), Expect = e-131
Identities = 243/293 (82%), Positives = 247/293 (84%)
Frame = +1
Query: 1 GSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKH 180
G+ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFI EFKR
Sbjct: 190 GAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRND 249
Query: 181 KKDISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADL 360
KKDIS+NKRAVRRLRTACERAKRTLSSS QA+IEIDSLYEGIDFYTSITRARFEELNADL
Sbjct: 250 KKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARFEELNADL 309
Query: 361 FRSTLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXX 540
FR TL+PVEKALRDAKLDK IHDIVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 310 FRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAV 369
Query: 541 XXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXX 720
ILSGDKSE VQD GIETAGGVMT LIKRN
Sbjct: 370 AYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFT 429
Query: 721 XYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 879
YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDA
Sbjct: 430 TYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDA 482
>sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (Hsc 70-4)
Length = 652
Score = 459 bits (1181), Expect = e-129
Identities = 235/291 (80%), Positives = 247/291 (84%)
Frame = +1
Query: 7 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKK 186
ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHF+QEFKRK+KK
Sbjct: 192 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFVQEFKRKYKK 251
Query: 187 DISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFR 366
D++ NKRA+RRLRTACERAKRTLSSS QA+IEIDSL+EGIDFYTSITRARFEELNADLFR
Sbjct: 252 DLTTNKRALRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNADLFR 311
Query: 367 STLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXX 546
ST+EPVEK+LRDAK+DK IHDIVLVGGSTRIPK+QKLLQD FNGKELNKSINPDE
Sbjct: 312 STMEPVEKSLRDAKMDKSQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAVAY 371
Query: 547 XXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXY 726
IL GDKSE VQD GIETAGGVMT LIKRN Y
Sbjct: 372 GAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQTFTTY 431
Query: 727 SDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 879
SDNQPGVLIQV+EGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDA
Sbjct: 432 SDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDA 482
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 458 bits (1179), Expect = e-129
Identities = 236/293 (80%), Positives = 245/293 (83%)
Frame = +1
Query: 1 GSERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKH 180
GSERNVLIFDLGGGTFDVSILTIEDGIF++KSTAGDTHLGGEDFDNRMVNHFI EFKRKH
Sbjct: 190 GSERNVLIFDLGGGTFDVSILTIEDGIFDLKSTAGDTHLGGEDFDNRMVNHFIAEFKRKH 249
Query: 181 KKDISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADL 360
KKDISDNKRAVRRL TACERAKRTLSSS QA+IEIDSLYEG+DFYTSITRARFEELNADL
Sbjct: 250 KKDISDNKRAVRRLATACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARFEELNADL 309
Query: 361 FRSTLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXX 540
FR TL+PVEKALRDAK+DK +HDIVLVGGSTRIPK++KLLQD FNGKELNKSINPDE
Sbjct: 310 FRGTLDPVEKALRDAKMDKAQVHDIVLVGGSTRIPKMEKLLQDFFNGKELNKSINPDEAV 369
Query: 541 XXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXX 720
GDKSE VQD GIETAGGVMT LIKRN
Sbjct: 370 AYGAAVQAESSLGDKSENVQDLVLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFT 429
Query: 721 XYSDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 879
YSDNQPGVLIQVYEGERAMTKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDA
Sbjct: 430 TYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDA 482
>sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70)
Length = 644
Score = 456 bits (1173), Expect = e-128
Identities = 232/291 (79%), Positives = 249/291 (85%)
Frame = +1
Query: 7 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKK 186
ERNVLIFDLGGGTFDVSILTIEDGIFEVK+TAGDTHLGGEDFDNR+V+HF++EFKRKHKK
Sbjct: 194 ERNVLIFDLGGGTFDVSILTIEDGIFEVKATAGDTHLGGEDFDNRLVSHFVEEFKRKHKK 253
Query: 187 DISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFR 366
DIS NKRA+RRLRTACERAKRTLSSS+QA+IEIDSL+EGIDFYTSITRARFEE+ +DLFR
Sbjct: 254 DISQNKRALRRLRTACERAKRTLSSSSQASIEIDSLFEGIDFYTSITRARFEEMCSDLFR 313
Query: 367 STLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXX 546
TLEPVEKALRDAK+DK IHD+VLVGGSTRIPK+QKLLQD FNG+ELNKSINPDE
Sbjct: 314 GTLEPVEKALRDAKMDKAQIHDVVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAVAY 373
Query: 547 XXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXY 726
ILSGDKSE VQD GIETAGGVMTALIKRN Y
Sbjct: 374 GAAIQAAILSGDKSENVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPSKQTQTFTTY 433
Query: 727 SDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 879
SDNQPGV+IQVYEGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDA
Sbjct: 434 SDNQPGVMIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDA 484
>sp|P08107|HSP71_HUMAN Heat shock 70 kDa protein 1 (HSP70.1) (HSP70-1/HSP70-2)
Length = 641
Score = 455 bits (1171), Expect = e-128
Identities = 232/291 (79%), Positives = 248/291 (85%)
Frame = +1
Query: 7 ERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNHFIQEFKRKHKK 186
ERNVLIFDLGGGTFDVSILTI+DGIFEVK+TAGDTHLGGEDFDNR+VNHF++EFKRKHKK
Sbjct: 192 ERNVLIFDLGGGTFDVSILTIDDGIFEVKATAGDTHLGGEDFDNRLVNHFVEEFKRKHKK 251
Query: 187 DISDNKRAVRRLRTACERAKRTLSSSAQANIEIDSLYEGIDFYTSITRARFEELNADLFR 366
DIS NKRAVRRLRTACERAKRTLSSS QA++EIDSL+EGIDFYTSITRARFEEL +DLFR
Sbjct: 252 DISQNKRAVRRLRTACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFR 311
Query: 367 STLEPVEKALRDAKLDKHTIHDIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXXXX 546
STLEPVEKALRDAKLDK IHD+VLVGGSTRIPK+QKLLQD FNG++LNKSINPDE
Sbjct: 312 STLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAY 371
Query: 547 XXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNXXXXXXXXXXXXXY 726
IL GDKSE VQD G+ETAGGVMTALIKRN Y
Sbjct: 372 GAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTY 431
Query: 727 SDNQPGVLIQVYEGERAMTKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDA 879
SDNQPGVLIQVYEGERAMTKDNNLLG+FEL+GIPPAPRGVPQIEVTFDIDA
Sbjct: 432 SDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDA 482
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.316 0.136 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,730,532
Number of Sequences: 369166
Number of extensions: 1557867
Number of successful extensions: 5619
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4545
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4736
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8790245790
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)