Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_021_M05
(409 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P07901|HS90A_MOUSE Heat shock protein HSP 90-alpha (HSP ... 160 7e-40
sp|P46633|HS90A_CRIGR Heat shock protein HSP 90-alpha (HSP 86) 160 7e-40
sp|P07900|HS90A_HUMAN Heat shock protein HSP 90-alpha (HSP 86) 160 1e-39
sp|O02705|HS90A_PIG Heat shock protein HSP 90-alpha (HSP 86) 158 4e-39
sp|P11501|HS90A_CHICK Heat shock protein HSP 90-alpha 157 6e-39
sp|O61998|HSP90_BRUPA Heat shock protein 90 157 6e-39
sp|P08238|HS90B_HUMAN Heat shock protein HSP 90-beta (HSP 8... 155 4e-38
sp|Q9GKX8|HS90B_HORSE Heat shock protein HSP 90-beta (HSP 84) 154 5e-38
sp|P11499|HS90B_MOUSE Heat shock protein HSP 90-beta (HSP 8... 154 5e-38
sp|Q9GKX7|HS90A_HORSE Heat shock protein HSP 90-alpha (HSP 86) 152 2e-37
>sp|P07901|HS90A_MOUSE Heat shock protein HSP 90-alpha (HSP 86) (Tumor specific
transplantation 86 kDa antigen) (TSTA)
Length = 733
Score = 160 bits (406), Expect = 7e-40
Identities = 81/119 (68%), Positives = 100/119 (84%), Gaps = 3/119 (2%)
Frame = +1
Query: 1 AQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSSG 180
AQALRD+STMGYMAAKKHLEINPDHSI++TL+ + +ADKNDKSVKDLV+LLYET+LLSSG
Sbjct: 617 AQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSG 676
Query: 181 FTLEDPQVHGNRIHRMIKLGLGIEDDDVEMDATEAG---DVPVVASTAEEDAGKMEEVD 348
F+LEDPQ H NRI+RMIKLGLGI++DD +D T A ++P + ++D +MEEVD
Sbjct: 677 FSLEDPQTHANRIYRMIKLGLGIDEDDPTVDDTSAAVTEEMPPL--EGDDDTSRMEEVD 733
>sp|P46633|HS90A_CRIGR Heat shock protein HSP 90-alpha (HSP 86)
Length = 733
Score = 160 bits (406), Expect = 7e-40
Identities = 81/119 (68%), Positives = 100/119 (84%), Gaps = 3/119 (2%)
Frame = +1
Query: 1 AQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSSG 180
AQALRD+STMGYMAAKKHLEINPDHSI++TL+ + +ADKNDKSVKDLV+LLYET+LLSSG
Sbjct: 617 AQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSG 676
Query: 181 FTLEDPQVHGNRIHRMIKLGLGIEDDDVEMDATEAG---DVPVVASTAEEDAGKMEEVD 348
F+LEDPQ H NRI+RMIKLGLGI++DD +D T A ++P + ++D +MEEVD
Sbjct: 677 FSLEDPQTHANRIYRMIKLGLGIDEDDPTVDDTSAAVTEEMPPL--EGDDDTSRMEEVD 733
>sp|P07900|HS90A_HUMAN Heat shock protein HSP 90-alpha (HSP 86)
Length = 732
Score = 160 bits (404), Expect = 1e-39
Identities = 81/119 (68%), Positives = 99/119 (83%), Gaps = 3/119 (2%)
Frame = +1
Query: 1 AQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSSG 180
AQALRD+STMGYMAAKKHLEINPDHSI++TL+ + +ADKNDKSVKDLV+LLYET+LLSSG
Sbjct: 616 AQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSG 675
Query: 181 FTLEDPQVHGNRIHRMIKLGLGIEDDDVEMDATEAG---DVPVVASTAEEDAGKMEEVD 348
F+LEDPQ H NRI+RMIKLGLGI++DD D T A ++P + ++D +MEEVD
Sbjct: 676 FSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPL--EGDDDTSRMEEVD 732
>sp|O02705|HS90A_PIG Heat shock protein HSP 90-alpha (HSP 86)
Length = 733
Score = 158 bits (400), Expect = 4e-39
Identities = 80/119 (67%), Positives = 99/119 (83%), Gaps = 3/119 (2%)
Frame = +1
Query: 1 AQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSSG 180
AQALRD+STMGYMAAKKHLEINPDHSI++TL+ + +ADKNDKSVKDLV+LLYET+LLSSG
Sbjct: 617 AQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSG 676
Query: 181 FTLEDPQVHGNRIHRMIKLGLGIEDDDVEMDATEAG---DVPVVASTAEEDAGKMEEVD 348
F+LEDPQ H NRI+RMIKLGLGI++DD D + A ++P + ++D +MEEVD
Sbjct: 677 FSLEDPQTHANRIYRMIKLGLGIDEDDPTADDSSAAVTEEMPPL--EGDDDTSRMEEVD 733
>sp|P11501|HS90A_CHICK Heat shock protein HSP 90-alpha
Length = 728
Score = 157 bits (398), Expect = 6e-39
Identities = 79/117 (67%), Positives = 97/117 (82%), Gaps = 1/117 (0%)
Frame = +1
Query: 1 AQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSSG 180
AQALRD+STMGYMAAKKHLEINPDHSI++TL+ + +ADKNDKSVKDLV+LLYET+LLSSG
Sbjct: 612 AQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSG 671
Query: 181 FTLEDPQVHGNRIHRMIKLGLGIEDDDVEM-DATEAGDVPVVASTAEEDAGKMEEVD 348
F+LEDPQ H NRI+RMIKLGLGI++DD +A+ A + ++D +MEEVD
Sbjct: 672 FSLEDPQTHANRIYRMIKLGLGIDEDDTAAEEASPAVTEEMPPLEGDDDTSRMEEVD 728
>sp|O61998|HSP90_BRUPA Heat shock protein 90
Length = 717
Score = 157 bits (398), Expect = 6e-39
Identities = 84/121 (69%), Positives = 103/121 (85%), Gaps = 5/121 (4%)
Frame = +1
Query: 1 AQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSSG 180
AQALRDSSTMGYMAAKKHLEINPDHS++K L+ RV+ADKNDK+VKDLV+LL+ET+LLSSG
Sbjct: 598 AQALRDSSTMGYMAAKKHLEINPDHSVIKALRERVEADKNDKTVKDLVVLLFETALLSSG 657
Query: 181 FTLEDPQVHGNRIHRMIKLGLGI-EDDDVEMDATEAGD----VPVVASTAEEDAGKMEEV 345
F+LEDPQ+H +RI+RMIKLGL I ED++ E A+ +G+ VP + AEEDA +MEEV
Sbjct: 658 FSLEDPQLHASRIYRMIKLGLDITEDEEEEAIASVSGEKDECVPNLVG-AEEDASRMEEV 716
Query: 346 D 348
D
Sbjct: 717 D 717
>sp|P08238|HS90B_HUMAN Heat shock protein HSP 90-beta (HSP 84) (HSP 90)
Length = 724
Score = 155 bits (391), Expect = 4e-38
Identities = 78/119 (65%), Positives = 99/119 (83%), Gaps = 3/119 (2%)
Frame = +1
Query: 1 AQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSSG 180
AQALRD+STMGYM AKKHLEINPDH I++TL+ + +ADKNDK+VKDLV+LL+ET+LLSSG
Sbjct: 608 AQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSG 667
Query: 181 FTLEDPQVHGNRIHRMIKLGLGIEDDDV---EMDATEAGDVPVVASTAEEDAGKMEEVD 348
F+LEDPQ H NRI+RMIKLGLGI++D+V E +A ++P + +EDA +MEEVD
Sbjct: 668 FSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPNAAVPDEIPPL--EGDEDASRMEEVD 724
>sp|Q9GKX8|HS90B_HORSE Heat shock protein HSP 90-beta (HSP 84)
Length = 724
Score = 154 bits (390), Expect = 5e-38
Identities = 78/119 (65%), Positives = 98/119 (82%), Gaps = 3/119 (2%)
Frame = +1
Query: 1 AQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSSG 180
AQALRD+STMGYM AKKHLEINPDH I++TL+ + +ADKNDK+VKDLV+LL+ET+LLSSG
Sbjct: 608 AQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSG 667
Query: 181 FTLEDPQVHGNRIHRMIKLGLGIEDDDV---EMDATEAGDVPVVASTAEEDAGKMEEVD 348
F+LEDPQ H NRI+RMIKLGLGI++D+V E A ++P + +EDA +MEEVD
Sbjct: 668 FSLEDPQTHSNRIYRMIKLGLGIDEDEVAAEEPSAAVPDEIPPL--EGDEDASRMEEVD 724
>sp|P11499|HS90B_MOUSE Heat shock protein HSP 90-beta (HSP 84) (Tumor-specific
transplantation 84 kDa antigen) (TSTA)
Length = 724
Score = 154 bits (390), Expect = 5e-38
Identities = 78/119 (65%), Positives = 98/119 (82%), Gaps = 3/119 (2%)
Frame = +1
Query: 1 AQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSSG 180
AQALRD+STMGYM AKKHLEINPDH I++TL+ + +ADKNDK+VKDLV+LL+ET+LLSSG
Sbjct: 608 AQALRDNSTMGYMMAKKHLEINPDHPIVETLRQKAEADKNDKAVKDLVVLLFETALLSSG 667
Query: 181 FTLEDPQVHGNRIHRMIKLGLGIEDDDV---EMDATEAGDVPVVASTAEEDAGKMEEVD 348
F+LEDPQ H NRI+RMIKLGLGI++D+V E A ++P + +EDA +MEEVD
Sbjct: 668 FSLEDPQTHSNRIYRMIKLGLGIDEDEVTAEEPSAAVPDEIPPL--EGDEDASRMEEVD 724
>sp|Q9GKX7|HS90A_HORSE Heat shock protein HSP 90-alpha (HSP 86)
Length = 719
Score = 152 bits (385), Expect = 2e-37
Identities = 77/116 (66%), Positives = 96/116 (82%), Gaps = 3/116 (2%)
Frame = +1
Query: 1 AQALRDSSTMGYMAAKKHLEINPDHSIMKTLKARVDADKNDKSVKDLVMLLYETSLLSSG 180
AQALRD+STMGYMAAKKHLEINPDHSI++TL+ + +ADKNDKSVKDLV+LLYET+LLSSG
Sbjct: 606 AQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSG 665
Query: 181 FTLEDPQVHGNRIHRMIKLGLGIEDDDVEMDATEAG---DVPVVASTAEEDAGKME 339
F+LEDPQ H NRI+RMIKLGLGI++DD D + A ++P + ++D +ME
Sbjct: 666 FSLEDPQTHANRIYRMIKLGLGIDEDDPTADDSSAAVTEEMPPL--EGDDDTSRME 719
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,075,667
Number of Sequences: 369166
Number of extensions: 625797
Number of successful extensions: 2052
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2005
length of database: 68,354,980
effective HSP length: 98
effective length of database: 50,250,950
effective search space used: 1859285150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)