Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_021_L23
(370 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P47266|PIP_MYCGE Putative proline iminopeptidase (PIP) (... 29 3.9
sp|Q9Z7U0|TLC2_CHLPN ADP,ATP carrier protein 2 (ADP/ATP tra... 29 3.9
sp|Q9CF21|URK_LACLA Uridine kinase (Uridine monophosphokina... 28 5.0
>sp|P47266|PIP_MYCGE Putative proline iminopeptidase (PIP) (Prolyl aminopeptidase) (PAP)
Length = 308
Score = 28.9 bits (63), Expect = 3.9
Identities = 15/47 (31%), Positives = 24/47 (51%)
Frame = +1
Query: 70 ESNQEKVITDYLTKRRKLVPHGLALFAGVVAIYAYSIYSIKQEQFTD 210
E+N +K+++D+ R+KL LF G +Y+IK Q D
Sbjct: 77 ENNTDKLVSDFEILRQKLNIKNWTLFGGSWGSALALVYAIKHPQVVD 123
>sp|Q9Z7U0|TLC2_CHLPN ADP,ATP carrier protein 2 (ADP/ATP translocase 2)
Length = 540
Score = 28.9 bits (63), Expect = 3.9
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 109 KRRKLVPHGLALFAGVVAIYAYSIYSIKQEQFTDDPLDM*F 231
K ++L+P GL F +V ++YSIY + E ++ L M F
Sbjct: 128 KLQELLPQGLRGFIVMVRYWSYSIYYVMSELWSSVVLSMLF 168
>sp|Q9CF21|URK_LACLA Uridine kinase (Uridine monophosphokinase) (Cytidine
monophosphokinase)
Length = 206
Score = 28.5 bits (62), Expect = 5.0
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +1
Query: 40 ENEKAFIKRMESNQEKVI---TDYLTKRRKLVPHGLALFAGVVAIYAYSIYSIKQEQFTD 210
++ F +R ++N + + TDYL + K + +G A+ + IY Y+ ++ QE +
Sbjct: 45 QSHLTFEERTKTNYDHPLAFDTDYLIAQLKELQYGRAVD---IPIYDYAKHTRSQETYRQ 101
Query: 211 DPLDM 225
+P+D+
Sbjct: 102 EPVDV 106
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,305,768
Number of Sequences: 369166
Number of extensions: 636782
Number of successful extensions: 1188
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 68,354,980
effective HSP length: 89
effective length of database: 51,913,565
effective search space used: 1713147645
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)