Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_021_K20
(219 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q13627|DYR1A_HUMAN Dual specificity tyrosine-phosphoryla... 30 1.3
sp|Q61214|DYR1A_MOUSE Dual specificity tyrosine-phosphoryla... 30 1.3
sp|Q63470|DYR1A_RAT Dual specificity tyrosine-phosphorylati... 30 1.3
>sp|Q13627|DYR1A_HUMAN Dual specificity tyrosine-phosphorylation regulated kinase 1A
(Protein kinase minibrain homolog) (MNBH) (HP86) (Dual
specificity YAK1-related kinase)
Length = 763
Score = 30.4 bits (67), Expect = 1.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 196 LTPQRNAAHGHTYTGRSMTFCRHHHHYH 113
+ PQ+NA H H G S HHHH+H
Sbjct: 591 VAPQQNALHHH--HGNSSHHHHHHHHHH 616
>sp|Q61214|DYR1A_MOUSE Dual specificity tyrosine-phosphorylation regulated kinase 1A
(Protein kinase minibrain homolog) (MNBH) (MP86) (Dual
specificity YAK1-related kinase)
Length = 763
Score = 30.4 bits (67), Expect = 1.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 196 LTPQRNAAHGHTYTGRSMTFCRHHHHYH 113
+ PQ+NA H H G S HHHH+H
Sbjct: 591 VAPQQNALHHH--HGNSSHHHHHHHHHH 616
>sp|Q63470|DYR1A_RAT Dual specificity tyrosine-phosphorylation regulated kinase 1A
(Protein kinase minibrain homolog) (MNBH) (RP86) (Dual
specificity YAK1-related kinase)
Length = 763
Score = 30.4 bits (67), Expect = 1.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 196 LTPQRNAAHGHTYTGRSMTFCRHHHHYH 113
+ PQ+NA H H G S HHHH+H
Sbjct: 591 VAPQQNALHHH--HGNSSHHHHHHHHHH 616
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,288,134
Number of Sequences: 369166
Number of extensions: 303151
Number of successful extensions: 1475
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 821
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 68,354,980
effective HSP length: 44
effective length of database: 60,226,640
effective search space used: 1686345920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)