Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_021_K07
(494 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q5R4S7|QOR_PONPY Quinone oxidoreductase (NADPH:quinone r... 163 2e-40
sp|Q08257|QOR_HUMAN Quinone oxidoreductase (NADPH:quinone r... 162 5e-40
sp|P11415|QOR_CAVPO Quinone oxidoreductase (NADPH:quinone r... 161 9e-40
sp|O97764|QOR_BOVIN Zeta-crystallin 158 8e-39
sp|P47199|QOR_MOUSE Quinone oxidoreductase (NADPH:quinone r... 157 1e-38
sp|Q6AYT0|QOR_RAT Quinone oxidoreductase (NADPH:quinone red... 153 2e-37
sp|Q28452|QOR_LAMGU Quinone oxidoreductase (NADPH:quinone r... 149 4e-36
sp|Q8JFV8|VAT1_BRARE Synaptic vesicle membrane protein VAT-... 93 4e-19
sp|P40783|QOR_SALTY Quinone oxidoreductase (NADPH:quinone r... 90 3e-18
sp|Q99536|VAT1_HUMAN Synaptic vesicle membrane protein VAT-... 83 4e-16
>sp|Q5R4S7|QOR_PONPY Quinone oxidoreductase (NADPH:quinone reductase) (Zeta-crystallin)
Length = 329
Score = 163 bits (412), Expect = 2e-40
Identities = 81/161 (50%), Positives = 110/161 (68%)
Frame = +1
Query: 10 GVNPVETYIRADEFFFSPPLPWVPGGNCSGTILGLGPNAQNKFSVGQNVYTTSTKSGAYA 189
GVNPVETYIR+ + P LP+ PG + +G I +G NA + F G V+T+ST SG YA
Sbjct: 46 GVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGGNA-SAFKKGDRVFTSSTISGGYA 104
Query: 190 SHTVASMDHVHVLPDKLSFQQGAALGIPYFTAYSALFERGQAKPNETVLIHGASGAVGIG 369
+ +A+ V+ LP+KL F+QGAA+GIPYFTAY AL K E+VL+HGASG VG+
Sbjct: 105 EYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSAHVKAGESVLVHGASGGVGLA 164
Query: 370 CIQMAKAHNLTVIGTAGTDKGLQLIKDVGADYVFNHRKSGY 492
Q+A+A+ L V+GTAGT++G +++ GA VFNHR+ Y
Sbjct: 165 ACQIARAYGLKVLGTAGTEEGQKIVLQNGAHEVFNHREVNY 205
>sp|Q08257|QOR_HUMAN Quinone oxidoreductase (NADPH:quinone reductase) (Zeta-crystallin)
Length = 329
Score = 162 bits (409), Expect = 5e-40
Identities = 80/161 (49%), Positives = 110/161 (68%)
Frame = +1
Query: 10 GVNPVETYIRADEFFFSPPLPWVPGGNCSGTILGLGPNAQNKFSVGQNVYTTSTKSGAYA 189
GVNPVETYIR+ + P LP+ PG + +G I +G NA + F G V+T+ST SG YA
Sbjct: 46 GVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNA-SAFKKGDRVFTSSTISGGYA 104
Query: 190 SHTVASMDHVHVLPDKLSFQQGAALGIPYFTAYSALFERGQAKPNETVLIHGASGAVGIG 369
+ +A+ V+ LP+KL F+QGAA+GIPYFTAY AL K E+VL+HGASG VG+
Sbjct: 105 EYALAADHTVYKLPEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLA 164
Query: 370 CIQMAKAHNLTVIGTAGTDKGLQLIKDVGADYVFNHRKSGY 492
Q+A+A+ L ++GTAGT++G +++ GA VFNHR+ Y
Sbjct: 165 ACQIARAYGLKILGTAGTEEGQKIVLQNGAHEVFNHREVNY 205
>sp|P11415|QOR_CAVPO Quinone oxidoreductase (NADPH:quinone reductase) (Zeta-crystallin)
Length = 329
Score = 161 bits (407), Expect = 9e-40
Identities = 81/161 (50%), Positives = 111/161 (68%)
Frame = +1
Query: 10 GVNPVETYIRADEFFFSPPLPWVPGGNCSGTILGLGPNAQNKFSVGQNVYTTSTKSGAYA 189
G+NPVETYIR+ + P LP+ PG + +G + +G N + F G V+TTST SG YA
Sbjct: 46 GINPVETYIRSGTYTRIPLLPYTPGTDVAGVVESIG-NDVSAFKKGDRVFTTSTISGGYA 104
Query: 190 SHTVASMDHVHVLPDKLSFQQGAALGIPYFTAYSALFERGQAKPNETVLIHGASGAVGIG 369
+ +AS V+ LP+KL F+QGAA+GIPYFTA ALF +AK E+VL+HGASG VG+
Sbjct: 105 EYALASDHTVYRLPEKLDFRQGAAIGIPYFTACRALFHSARAKAGESVLVHGASGGVGLA 164
Query: 370 CIQMAKAHNLTVIGTAGTDKGLQLIKDVGADYVFNHRKSGY 492
Q+A+A+ L V+GTAGT++G +++ GA VFNHR + Y
Sbjct: 165 ACQIARAYGLKVLGTAGTEEGQKVVLQNGAHEVFNHRDAHY 205
>sp|O97764|QOR_BOVIN Zeta-crystallin
Length = 330
Score = 158 bits (399), Expect = 8e-39
Identities = 78/161 (48%), Positives = 109/161 (67%)
Frame = +1
Query: 10 GVNPVETYIRADEFFFSPPLPWVPGGNCSGTILGLGPNAQNKFSVGQNVYTTSTKSGAYA 189
GVNPV+TYIR+ P LP+ PG + +G I +G + + F G V+TT T SG YA
Sbjct: 46 GVNPVDTYIRSGTHNIKPLLPYTPGFDVAGIIEAVGESV-SAFKKGDRVFTTRTISGGYA 104
Query: 190 SHTVASMDHVHVLPDKLSFQQGAALGIPYFTAYSALFERGQAKPNETVLIHGASGAVGIG 369
+ +A+ V+ LP+KL F+QGAA+GIPYFTAY AL KP E+VL+HGASG VGI
Sbjct: 105 EYALAADHTVYTLPEKLDFKQGAAIGIPYFTAYRALLYSAPVKPGESVLVHGASGGVGIA 164
Query: 370 CIQMAKAHNLTVIGTAGTDKGLQLIKDVGADYVFNHRKSGY 492
Q+A+A+ L V+GTA T++G +++ + GA VFNH+++ Y
Sbjct: 165 ACQIARAYGLKVLGTASTEEGQKIVLENGAHKVFNHKEANY 205
>sp|P47199|QOR_MOUSE Quinone oxidoreductase (NADPH:quinone reductase) (Zeta-crystallin)
Length = 331
Score = 157 bits (398), Expect = 1e-38
Identities = 78/161 (48%), Positives = 109/161 (67%)
Frame = +1
Query: 10 GVNPVETYIRADEFFFSPPLPWVPGGNCSGTILGLGPNAQNKFSVGQNVYTTSTKSGAYA 189
GVNPVETYIR+ + P LP+ PG + +G I +G + F G V+ ST SG YA
Sbjct: 46 GVNPVETYIRSGAYSRKPALPYTPGSDVAGIIESVGDKV-SAFKKGDRVFCYSTVSGGYA 104
Query: 190 SHTVASMDHVHVLPDKLSFQQGAALGIPYFTAYSALFERGQAKPNETVLIHGASGAVGIG 369
+A+ D ++ LP+ L+F+QGAALGIPYFTA ALF +A+ E+VL+HGASG VG+
Sbjct: 105 EFALAADDTIYPLPETLNFRQGAALGIPYFTACRALFHSARARAGESVLVHGASGGVGLA 164
Query: 370 CIQMAKAHNLTVIGTAGTDKGLQLIKDVGADYVFNHRKSGY 492
Q+A+AH L V+GTAG+++G +L+ GA VFNH+++ Y
Sbjct: 165 TCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEVFNHKEANY 205
>sp|Q6AYT0|QOR_RAT Quinone oxidoreductase (NADPH:quinone reductase) (Zeta-crystallin)
Length = 329
Score = 153 bits (386), Expect = 2e-37
Identities = 76/161 (47%), Positives = 107/161 (66%)
Frame = +1
Query: 10 GVNPVETYIRADEFFFSPPLPWVPGGNCSGTILGLGPNAQNKFSVGQNVYTTSTKSGAYA 189
GVNPVETYIR+ + P LP+ PG + +G I +G + F G V+ ST SG YA
Sbjct: 46 GVNPVETYIRSGTYSRKPALPYTPGSDVAGIIESVGDGV-SAFKKGDRVFCFSTVSGGYA 104
Query: 190 SHTVASMDHVHVLPDKLSFQQGAALGIPYFTAYSALFERGQAKPNETVLIHGASGAVGIG 369
+++ + + LP+ L F+QGAALGIPYFTA ALF +A+ E+VL+HGASG VG+
Sbjct: 105 EFALSADNTTYPLPETLDFRQGAALGIPYFTACRALFHSARARAGESVLVHGASGGVGLA 164
Query: 370 CIQMAKAHNLTVIGTAGTDKGLQLIKDVGADYVFNHRKSGY 492
Q+A+AH L V+GTAG+++G +L+ GA VFNH+++ Y
Sbjct: 165 TCQIARAHGLKVLGTAGSEEGKKLVLQNGAHEVFNHKEANY 205
>sp|Q28452|QOR_LAMGU Quinone oxidoreductase (NADPH:quinone reductase) (Zeta-crystallin)
Length = 330
Score = 149 bits (376), Expect = 4e-36
Identities = 76/158 (48%), Positives = 105/158 (66%)
Frame = +1
Query: 10 GVNPVETYIRADEFFFSPPLPWVPGGNCSGTILGLGPNAQNKFSVGQNVYTTSTKSGAYA 189
GVNPV+TYIR+ + P LP+ PG + +G I +G + F G V+TTST SG YA
Sbjct: 46 GVNPVDTYIRSGTYSRKPRLPYTPGLDVAGLIEAVGERV-SAFKKGDRVFTTSTVSGGYA 104
Query: 190 SHTVASMDHVHVLPDKLSFQQGAALGIPYFTAYSALFERGQAKPNETVLIHGASGAVGIG 369
+ +A+ V+ LP +L FQ+GAA+G+PYFTAY AL AK E+VL+HGASG VG+
Sbjct: 105 EYALAADHTVYKLPGELDFQKGAAIGVPYFTAYRALLHSACAKAGESVLVHGASGGVGLA 164
Query: 370 CIQMAKAHNLTVIGTAGTDKGLQLIKDVGADYVFNHRK 483
Q+A+A V+GTAGT++G +++ GA VFNHR+
Sbjct: 165 ACQIARACCFKVLGTAGTEEGQRVVLQNGAHEVFNHRE 202
>sp|Q8JFV8|VAT1_BRARE Synaptic vesicle membrane protein VAT-1 homolog
Length = 484
Score = 92.8 bits (229), Expect = 4e-19
Identities = 56/165 (33%), Positives = 86/165 (52%), Gaps = 1/165 (0%)
Frame = +1
Query: 1 KYIGVNPVETYIRADEFFFSPPLPWVPGGNCSGTILGLGPNAQNKFSVGQNVYTTSTKSG 180
K G+N + R + P P PG CSG I +G ++ VG V + +SG
Sbjct: 106 KMCGLNFADLMARQGLYDRLPSPPVTPGMECSGVIEAVGEEVTDR-KVGDKVLVLN-RSG 163
Query: 181 AYASHTVASMDHVHVLPDKLSFQQGAALGIPYFTAYSALFERGQAKPNETVLIHGASGAV 360
+ V + H ++P+ +SF++ AAL + Y TAY LF+ G +PN++VL+H A+G V
Sbjct: 164 MWQEVVVVASTHTFLMPEGMSFEEAAALPVNYITAYMMLFDFGHLRPNQSVLVHMAAGGV 223
Query: 361 GIGCIQMAKAHN-LTVIGTAGTDKGLQLIKDVGADYVFNHRKSGY 492
GI Q+ K N +TV GTA K ++I G + ++R Y
Sbjct: 224 GIAATQLCKTVNDVTVFGTASASKH-EVISQGGVTHPIDYRTRDY 267
>sp|P40783|QOR_SALTY Quinone oxidoreductase (NADPH:quinone reductase) (Zeta-crystallin
homolog protein)
Length = 327
Score = 89.7 bits (221), Expect = 3e-18
Identities = 57/161 (35%), Positives = 83/161 (51%)
Frame = +1
Query: 1 KYIGVNPVETYIRADEFFFSPPLPWVPGGNCSGTILGLGPNAQNKFSVGQNVYTTSTKSG 180
K IG+N ++TYIR+ + P LP G +G + +G N VG V + G
Sbjct: 36 KAIGINFIDTYIRSG-LYPPPSLPAGLGTEAAGVVSKVG-NGVEHIRVGDRVVYAQSTLG 93
Query: 181 AYASHTVASMDHVHVLPDKLSFQQGAALGIPYFTAYSALFERGQAKPNETVLIHGASGAV 360
AY+S + D +LPD +SF+Q AA + T + L + + KP+E L H A+G V
Sbjct: 94 AYSSVHNVTADKAAILPDAISFEQAAASFLKGLTVFYLLRKTYEVKPDEPFLFHAAAGGV 153
Query: 361 GIGCIQMAKAHNLTVIGTAGTDKGLQLIKDVGADYVFNHRK 483
G+ Q AKA +IGT G+ + Q D GA V N+R+
Sbjct: 154 GLIACQWAKALGAKLIGTVGSAQKAQRALDAGAWQVINYRE 194
>sp|Q99536|VAT1_HUMAN Synaptic vesicle membrane protein VAT-1 homolog
Length = 393
Score = 82.8 bits (203), Expect = 4e-16
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 1/162 (0%)
Frame = +1
Query: 10 GVNPVETYIRADEFFFSPPLPWVPGGNCSGTILGLGPNAQNKFSVGQNVYTTSTKSGAYA 189
G+N + R + PPLP PG +G ++ +G ++ G V + +SG +
Sbjct: 87 GLNFADLMARQGLYDRLPPLPVTPGMEGAGVVIAVGEGVSDR-KAGDRVMVLN-RSGMWQ 144
Query: 190 SHTVASMDHVHVLPDKLSFQQGAALGIPYFTAYSALFERGQAKPNETVLIHGASGAVGIG 369
++P+ ++F++ AAL + Y TAY LF+ G +P +VL+H A+G VG+
Sbjct: 145 EEVTVPSVQTFLIPEAMTFEEAAALLVNYITAYMVLFDFGNLQPGHSVLVHMAAGGVGMA 204
Query: 370 CIQMAK-AHNLTVIGTAGTDKGLQLIKDVGADYVFNHRKSGY 492
+Q+ + N+TV GTA K + +K+ G + ++ + Y
Sbjct: 205 AVQLCRTVENVTVFGTASASKH-EALKENGVTHPIDYHTTDY 245
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,429,092
Number of Sequences: 369166
Number of extensions: 1239131
Number of successful extensions: 3673
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3646
length of database: 68,354,980
effective HSP length: 102
effective length of database: 49,512,010
effective search space used: 3069744620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)