Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_021_J13
(496 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 122 6e-28
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 122 6e-28
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 122 6e-28
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 119 4e-27
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 118 7e-27
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 118 9e-27
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 117 2e-26
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 116 3e-26
sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (He... 115 4e-26
sp|P17156|HSP72_MOUSE Heat shock-related 70 kDa protein 2 (... 115 4e-26
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 122 bits (305), Expect = 6e-28
Identities = 58/112 (51%), Positives = 75/112 (66%)
Frame = +3
Query: 60 RIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDY 239
++++KNSLESYA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++
Sbjct: 535 KVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEH 594
Query: 240 HYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 395
KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 595 QQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 122 bits (305), Expect = 6e-28
Identities = 58/112 (51%), Positives = 75/112 (66%)
Frame = +3
Query: 60 RIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDY 239
++++KNSLESYA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++
Sbjct: 535 KVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEH 594
Query: 240 HYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 395
KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 595 QQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 122 bits (305), Expect = 6e-28
Identities = 58/112 (51%), Positives = 75/112 (66%)
Frame = +3
Query: 60 RIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDY 239
++++KNSLESYA+ MKATVEDEKL+ KI++ D++ I+DKC E I WLDKNQ A K+EF++
Sbjct: 535 KVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEH 594
Query: 240 HYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 395
KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 595 QQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 119 bits (298), Expect = 4e-27
Identities = 59/115 (51%), Positives = 75/115 (65%), Gaps = 3/115 (2%)
Frame = +3
Query: 60 RIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDY 239
+++AKN LESYA+ MK+TVEDEKLK KIS+ D++ I+DKC E IGWLDKNQ A ++EF++
Sbjct: 535 KVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKQKILDKCNEVIGWLDKNQTAEREEFEH 594
Query: 240 HYKELEKVCNPIMTKMYQ---XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 395
KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 595 QQKELEKVCNPIITKLYQSAGGMPGGMPEGMPGGFPGAGAAPGGGSSGPTIEEVD 649
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 118 bits (296), Expect = 7e-27
Identities = 61/112 (54%), Positives = 72/112 (64%)
Frame = +3
Query: 60 RIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDY 239
RIAAKN+LESYA+ MK T+EDEKLKDKISE D+K I +KC E + WLD NQ A KDEF++
Sbjct: 534 RIAAKNALESYAFNMKQTIEDEKLKDKISEEDKKKIQEKCDETVRWLDGNQTAEKDEFEH 593
Query: 240 HYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 395
KELE VCNPI+TK+YQ GPT+EEVD
Sbjct: 594 RQKELESVCNPIITKLYQSAGGMPGGMPGGMPGGAPGAGSTG-GGPTIEEVD 644
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 118 bits (295), Expect = 9e-27
Identities = 58/117 (49%), Positives = 76/117 (64%), Gaps = 5/117 (4%)
Frame = +3
Query: 60 RIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDY 239
++++KNSLESYA+ MK+TVEDEKL+ KIS+ D+ I++KC E IGWLDKNQ A K+E+++
Sbjct: 535 KVSSKNSLESYAFNMKSTVEDEKLQGKISDEDKTKILEKCNEVIGWLDKNQTAEKEEYEH 594
Query: 240 HYKELEKVCNPIMTKMYQ-----XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 395
H KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 595 HQKELEKVCNPIITKLYQGAGGMPGGMPEGMAGGFPGAGGAAPGGGGSSGPTIEEVD 651
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 117 bits (292), Expect = 2e-26
Identities = 58/112 (51%), Positives = 73/112 (65%)
Frame = +3
Query: 60 RIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDY 239
R+AAKN+LESY Y +K TVEDEKL+ KISE D+ I+DKCQE I WLD+NQ A KDE+++
Sbjct: 538 RVAAKNALESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEH 597
Query: 240 HYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 395
KELE+VCNPI++K+YQ GPT+EEVD
Sbjct: 598 KQKELERVCNPIISKLYQ----------GGPGGGSGGGGSGASGGPTIEEVD 639
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 116 bits (291), Expect = 3e-26
Identities = 58/115 (50%), Positives = 73/115 (63%), Gaps = 3/115 (2%)
Frame = +3
Query: 60 RIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDY 239
+++AKN LESYA+ MK+TVEDEKLK KIS+ D+ I+DKC E I WLDKNQ A KDE+++
Sbjct: 535 KVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKDEYEH 594
Query: 240 HYKELEKVCNPIMTKMYQ---XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 395
K+LEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 595 QQKDLEKVCNPIITKLYQSDGGMPGGMPDGMPGGFQELGAAPGGGSSGPTIEEVD 649
>sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (Heat shock protein 70.2)
(Testis-specific heat shock protein-related) (HST)
Length = 633
Score = 115 bits (289), Expect = 4e-26
Identities = 57/112 (50%), Positives = 73/112 (65%)
Frame = +3
Query: 60 RIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDY 239
R+AAKN++ESY Y +K TVEDEKL+ KISE D+ I+DKCQE I WLD+NQ A KDE+++
Sbjct: 538 RVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEH 597
Query: 240 HYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 395
KELE+VCNPI++K+YQ GPT+EEVD
Sbjct: 598 KQKELERVCNPIISKLYQ----------------GGPGGGGSSGGPTIEEVD 633
>sp|P17156|HSP72_MOUSE Heat shock-related 70 kDa protein 2 (Heat shock protein 70.2)
Length = 633
Score = 115 bits (289), Expect = 4e-26
Identities = 57/112 (50%), Positives = 73/112 (65%)
Frame = +3
Query: 60 RIAAKNSLESYAYQMKATVEDEKLKDKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDY 239
R+AAKN++ESY Y +K TVEDEKL+ KISE D+ I+DKCQE I WLD+NQ A KDE+++
Sbjct: 538 RVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEH 597
Query: 240 HYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 395
KELE+VCNPI++K+YQ GPT+EEVD
Sbjct: 598 KQKELERVCNPIISKLYQ----------------GGPGGGGSSGGPTIEEVD 633
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,692,575
Number of Sequences: 369166
Number of extensions: 423829
Number of successful extensions: 1592
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1493
length of database: 68,354,980
effective HSP length: 102
effective length of database: 49,512,010
effective search space used: 3069744620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)