Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_021_I06
(810 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 496 e-140
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 496 e-140
sp|Q964D9|ACTC_HELTI Actin, cytoplasmic 495 e-140
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 495 e-140
sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic 495 e-140
sp|P92176|ACT2_LUMTE Actin-2 495 e-140
sp|P12716|ACTC_PISOC Actin, cytoplasmic 494 e-140
sp|P92179|ACTC_BIOGL Actin, cytoplasmic 494 e-139
sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3) 494 e-139
sp|P30163|ACT2_ONCVO Actin-2 494 e-139
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 496 bits (1277), Expect = e-140
Identities = 242/257 (94%), Positives = 252/257 (98%)
Frame = +3
Query: 3 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 182
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASG
Sbjct: 88 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
Query: 183 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 362
RTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAER
Sbjct: 148 RTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAER 207
Query: 363 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 542
EIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSF 267
Query: 543 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 722
LG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMK
Sbjct: 268 LGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMK 327
Query: 723 IKIVAPPERKYSVWIGG 773
IKI+APPERKYSVWIGG
Sbjct: 328 IKIIAPPERKYSVWIGG 344
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 496 bits (1277), Expect = e-140
Identities = 242/257 (94%), Positives = 253/257 (98%)
Frame = +3
Query: 3 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 182
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASG
Sbjct: 88 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
Query: 183 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 362
RTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAER
Sbjct: 148 RTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAER 207
Query: 363 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 542
EIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 267
Query: 543 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 722
LG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMK
Sbjct: 268 LGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMK 327
Query: 723 IKIVAPPERKYSVWIGG 773
IKI+APPERKYSVWIGG
Sbjct: 328 IKIIAPPERKYSVWIGG 344
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
Length = 376
Score = 495 bits (1275), Expect = e-140
Identities = 241/257 (93%), Positives = 252/257 (98%)
Frame = +3
Query: 3 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 182
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASG
Sbjct: 88 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
Query: 183 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 362
RTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAER
Sbjct: 148 RTTGIVIDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAER 207
Query: 363 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 542
EIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERFRCPEA++QPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMYQPSF 267
Query: 543 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 722
LG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMK
Sbjct: 268 LGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMK 327
Query: 723 IKIVAPPERKYSVWIGG 773
IKI+APPERKYSVWIGG
Sbjct: 328 IKIIAPPERKYSVWIGG 344
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 495 bits (1275), Expect = e-140
Identities = 242/257 (94%), Positives = 251/257 (97%)
Frame = +3
Query: 3 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 182
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASG
Sbjct: 88 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
Query: 183 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 362
RTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAER
Sbjct: 148 RTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAER 207
Query: 363 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 542
EIVRDIKEKLCY+ALDF+ EM TA+ SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMHTAATSSSLEKSYELPDGQVITIGNERFRCPEAVFQPSF 267
Query: 543 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 722
LG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMK
Sbjct: 268 LGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMK 327
Query: 723 IKIVAPPERKYSVWIGG 773
IKI+APPERKYSVWIGG
Sbjct: 328 IKIIAPPERKYSVWIGG 344
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
Length = 376
Score = 495 bits (1275), Expect = e-140
Identities = 241/257 (93%), Positives = 252/257 (98%)
Frame = +3
Query: 3 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 182
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASG
Sbjct: 88 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
Query: 183 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 362
RTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAER
Sbjct: 148 RTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAER 207
Query: 363 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 542
EIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERFRCPEA+FQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEAMFQPSF 267
Query: 543 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 722
LG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMK
Sbjct: 268 LGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMK 327
Query: 723 IKIVAPPERKYSVWIGG 773
IKI+APPERKYSVWIGG
Sbjct: 328 IKIIAPPERKYSVWIGG 344
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 495 bits (1274), Expect = e-140
Identities = 243/257 (94%), Positives = 252/257 (98%)
Frame = +3
Query: 3 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 182
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN+PAMYVAIQAVLSLYASG
Sbjct: 88 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASG 147
Query: 183 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 362
RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER
Sbjct: 148 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 207
Query: 363 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 542
EIVRDIKEKLCY+ALDF+ EM TASASSSLEKSYELPDGQVITIGNERFRCPEA+F SF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMNTASASSSLEKSYELPDGQVITIGNERFRCPEAMFHASF 267
Query: 543 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 722
LG+ESVGIHETTYNSIMKCDVDIRKDLYAN VLSGG+TM+PGIADRMQKEI+ALAPPTMK
Sbjct: 268 LGMESVGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQKEITALAPPTMK 327
Query: 723 IKIVAPPERKYSVWIGG 773
IKI+APPERKYSVWIGG
Sbjct: 328 IKIIAPPERKYSVWIGG 344
>sp|P12716|ACTC_PISOC Actin, cytoplasmic
Length = 376
Score = 494 bits (1273), Expect = e-140
Identities = 241/257 (93%), Positives = 252/257 (98%)
Frame = +3
Query: 3 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 182
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASG
Sbjct: 88 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
Query: 183 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 362
RTTGIV DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER
Sbjct: 148 RTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 207
Query: 363 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 542
EIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYELPDGQVITIGNERFRCPEALFQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 267
Query: 543 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 722
LG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKE++ALAPPTMK
Sbjct: 268 LGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEVTALAPPTMK 327
Query: 723 IKIVAPPERKYSVWIGG 773
IKI+APPERKYSVWIGG
Sbjct: 328 IKIIAPPERKYSVWIGG 344
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
Length = 376
Score = 494 bits (1272), Expect = e-139
Identities = 241/257 (93%), Positives = 251/257 (97%)
Frame = +3
Query: 3 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 182
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASG
Sbjct: 88 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
Query: 183 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 362
RTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILTERGYSFTTTAER
Sbjct: 148 RTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAER 207
Query: 363 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 542
EIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNERFRCPEA FQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNERFRCPEATFQPSF 267
Query: 543 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 722
LG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQKEI+ALAPPTMK
Sbjct: 268 LGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQKEITALAPPTMK 327
Query: 723 IKIVAPPERKYSVWIGG 773
IKI+APPERKYSVWIGG
Sbjct: 328 IKIIAPPERKYSVWIGG 344
>sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3)
Length = 375
Score = 494 bits (1272), Expect = e-139
Identities = 243/257 (94%), Positives = 251/257 (97%)
Frame = +3
Query: 3 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 182
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASG
Sbjct: 87 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 146
Query: 183 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 362
RTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER
Sbjct: 147 RTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 206
Query: 363 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 542
EIVRDIKEKLCY+ALDF+ EM TAS+SSSLEKSYELPDGQVITIGNERFRCPEALFQPSF
Sbjct: 207 EIVRDIKEKLCYVALDFEQEMATASSSSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 266
Query: 543 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 722
LG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMYPGIADRMQKEI+ALAP TMK
Sbjct: 267 LGMESSGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMK 326
Query: 723 IKIVAPPERKYSVWIGG 773
IKI+APPERKYSVWIGG
Sbjct: 327 IKIIAPPERKYSVWIGG 343
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 494 bits (1272), Expect = e-139
Identities = 242/257 (94%), Positives = 251/257 (97%)
Frame = +3
Query: 3 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASG 182
HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASG
Sbjct: 88 HHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASG 147
Query: 183 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 362
RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER
Sbjct: 148 RTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAER 207
Query: 363 EIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNERFRCPEALFQPSF 542
EIVRDIKEKLCY+ALDF+ EM TA++SSSLEKSYELPDGQVIT+GNERFRCPEALFQPSF
Sbjct: 208 EIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITVGNERFRCPEALFQPSF 267
Query: 543 LGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQKEISALAPPTMK 722
LG+ES GIHETTYNSIMKCD+DIRKDLYAN VLSGGSTMYPGIADRMQKEI+ALAP TMK
Sbjct: 268 LGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGSTMYPGIADRMQKEITALAPSTMK 327
Query: 723 IKIVAPPERKYSVWIGG 773
IKI+APPERKYSVWIGG
Sbjct: 328 IKIIAPPERKYSVWIGG 344
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,386,554
Number of Sequences: 369166
Number of extensions: 1876042
Number of successful extensions: 6062
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5913
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7715018400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)